GSE100922

Expression data from whole blood in CD patients undergoing HSCT.

Whole-study status Not suitable

Dataset does not meet the current suitability threshold.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

View matching samples

42 case / 0 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: microarray
Organism: Homo sapiens
Whole-study samples: 42 samples
Specimen: Biofluid
Reported/interpreted study design: Unclear study design Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Corraliza AM, Salas A
Contact name: Azucena Salas
Submission date: 2017-07-07
Last update: 2021-07-25
Organization: IDIBAPS
Department: Gastroenterology
Public date: 2019-01-23
Experiment types: Expression profiling by array
Platforms: GPL21464 [HG-U219_Hs_ENTREZG_19] Affymetrix Human Genome U219 Array [CDF: Brainarray HGU219_Hs_ENTREZG_19.0.0]
Series type: Series
SubSeries: Not available
BioProject: PRJNA393440

Summary

Treatment of severely refractory Crohn’s disease (CD) patients remains a clinical challenge. Recent studies show efficacy of autologous hematopoietic stem cell transplant (HSCT) in these severely compromised patients. HSCT is thought to eliminate auto-reactive cells; however the mechanisms are incompletely understood. We followed a group of patients (n=18) receiving autologous HSCT, with 50% of them achieving endoscopic drug-free remission. To elucidate the mechanism driving efficacy we compared the immunological changes induced by HSCT in responders and non-responders.

Overall design

Blood from CD patients undergoing HSCT was collected into PAXgene tubes and frozen at -20ºC (PAXgene Blood RNA Tube / PreAnalytiX (Qiagen, Spain)). Simple Endoscopic Score for Crohn's Disease (SES-CD) index was used at baseline and during follow-up to assess endoscopic activity. Magnetic Resonance Indeex of Activity (MaRIA) was used at baseline and during forllow up in those patients in whom lesions could not be assessed by ileocolonoscopy; mucosal healing was defined as a segmental index < 7 in all ileocolonic segments. Response was defined as mucosal healing at 52 weeks after-HSCT. Blood RNA isolation was performed with the PAXgene Blood RNA Kit using an automated protocol of QIAcube (Qiagen, Spain). Purity and integrity of the total RNA is assessed through 2100 Bioanalyzer (Agilent, Germany) and then quantified by NanoDrop spectrophotometer (NanoDrop Technologies, USA). A total of 42 samples belonging to 14 patients were analized.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 42 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Planned source for curated expression experiment links.	No match found
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 1 linked publication 1 DOI Primary publication Differences in Peripheral and Tissue Immune Cell Populations Following Haematopoietic Stem Cell Transplantation in Crohn's Disease Patients. Journal of Crohn's & colitis, 2019 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

93 pts

Clarity: 93%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Only one side of the comparison is clearly grouped. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: Treatment status metadata normalized where treatment is part of the comparison. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Not ready

55% DE readiness

Contrast completeness

10/25 pts

Only one side of the contrast is present; downstream DE needs both groups.

Minimum group size

0/20 pts

Minimum group size cannot be evaluated until a complete contrast exists.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

0/10 pts

Critical warnings must be resolved before downstream analysis.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No complete case/control contrast is available.
Critical dataset warnings must be resolved.

Next Steps

Resolve critical warnings before downstream analysis.

Analysis Preparation Checklist

4/6 ready

Group labels reviewed

Blocked

No complete case/control grouping exists yet.

Review the sample grouping table and assign both case and control groups.

Minimum sample count met

Blocked

At least one group has fewer than 2 samples.

Choose a larger dataset or merge only scientifically valid groups.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Review the grouping table for biologically meaningful differences that the automated checks may not detect.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Analysis readiness has blockers that must be resolved before DE.

Analysis preparation checklist contains blocked items.

No complete case/control or treatment/control contrast is available.

At least one comparison group has fewer than two samples.

Critical dataset warnings are present.

Assay context may require expert handling before DESeq2-style analysis.

Study design is model-system or unclear and should be reviewed before analysis.

Why This Is Ranked Here

Tumor vs normal

Not suitable Dataset does not meet the current suitability threshold.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Assay differs from search intent Microarray Search intent expects bulk RNA-seq. Assay came from Normalization rules.
Disease context Crohn's disease Disease context came from Normalization rules.
Likely case group Crohn's disease 42 samples
Likely control group No control group detected 0 samples

Intent Interpretation

Downgrade or exclusion reason Comparison: Unclear study design. Specimen: Biofluid. Comparison suitability: 0%. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

Interpreted disease metadata: Crohn's disease.
Processed data is available for downstream review.
External evidence: PubMed links 1 publication; 1 DOI available: PMID 30521002.
Publication context: Differences in Peripheral and Tissue Immune Cell Populations Following Haematopoietic Stem Cell Transplantation in Crohn's Disease Patients.. Journal of Crohn's & colitis, 2019. PMID 30521002. DOI 10.1093/ecco-jcc/jjy203.

Cautions

Comparison: Unclear study design. Specimen: Biofluid. Comparison suitability: 0%.
Downgraded for tissue search because it is a biofluid cohort.
Downgraded for tissue search because study design or specimen source is unclear.
Downgraded assay: microarray cohorts are separated from the RNA-seq intent.
Blood, plasma, or serum cohort downgraded because this ranking targets tissue tumor-vs-normal comparisons.
Unclear study design downgraded for patient tissue tumor-vs-normal search intent.
Missing or unclear metadata. Unclear study design downgraded for patient tissue tumor-vs-normal search intent.
Overall score capped because comparison suitability is weak for the selected search intent.
Missing or unclear metadata. Comparison - Unclear study design. Specimen - Biofluid. Comparison suitability: 0%.
Missing or unclear metadata. Downgraded for tissue search because study design or specimen source is unclear.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

No clear control group was detected from normalized metadata.
Microarray expression context was detected; compare separately from RNA-seq cohorts.
Microarray datasets are downgraded in the patient-tissue tumor-normal intent unless secondary assays are explicitly enabled.
Patient-tissue tumor-normal intent requires clear tumor-normal grouping.

Normalized Fields

156 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source blood GSM2696434 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696435 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696436 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696437 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696438 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696439 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696440 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696441 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696442 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696443 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696444 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696445 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696446 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696447 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696448 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696449 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696450 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696451 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696452 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696453 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696454 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696455 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696456 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696457 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696458 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696459 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696460 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696461 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696462 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696463 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696464 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696465 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696466 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696467 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696468 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696469 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696470 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696471 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696472 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696473 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696474 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM2696475 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence peripheral blood tissue: Peripheral blood sample-anatomical-source-v1 sample-local anatomical source

assay_type microarray GSE100922 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence microarray dataset_accession: GSE100922 dataset_title: Expression data from whole blood in CD patients undergoing HSCT. organism: Homo sapiens assay_type: microarray processed_data_availab... keyword match keyword match: microarray

disease Crohn's disease GSE100922 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease dataset_accession: GSE100922 dataset_title: Expression data from whole blood in CD patients undergoing HSCT. organism: Homo sapiens assay_type: microarray processed_data_availab... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696434 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-E09-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 18; disease location: Ileocoloni... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696435 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-D07-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 18; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696436 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-E05-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location: Colonic; d... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696437 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-D09-T13_2 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696438 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-H05-T26_1 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696439 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-A09-T52_3 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696440 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-H09-T0_3 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location: Ileocoloni... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696441 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-F09-T13_1 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696442 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-A07-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 36; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696443 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-A07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location: Ileocoloni... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696444 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-B07-T13_2 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696445 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-A07-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696446 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-D05-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696447 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-E07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location: Ileocoloni... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696448 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-A05-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696449 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-F05-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696450 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-D07-T52_1 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696451 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-B09-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location: Ileocoloni... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696452 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-E05-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696453 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-E09-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696454 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-F09-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696455 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-D05-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 32; disease location: Ileocoloni... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696456 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-B09-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696457 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-H07-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696458 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-C07-T52_1 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696459 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-C05-T0_3 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location: Ileal+L4; ... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696460 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-G07-T13_1 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696461 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-E09-T26_2 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696462 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-H05-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 21; disease location: Ileocoloni... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696463 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-C07-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 21; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696464 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-G09-T26_2 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 21; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696465 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-G05-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location: Colonic; d... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696466 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-F07-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 36; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696467 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-G07-T52_3 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 37; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696468 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-F07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location: Ileocoloni... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696469 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-H05-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 25; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696470 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-D09-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 25; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696471 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-G09-T52_3 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696472 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-A09-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location: Colonic; d... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696473 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-F09-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696474 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-G05-T26_2 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2696475 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Blood-B05-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 30; disease location... controlled vocabulary controlled vocabulary disease match: Crohn's disease

organism Homo sapiens GSE100922 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE100922 dataset_title: Expression data from whole blood in CD patients undergoing HSCT. organism: Homo sapiens assay_type: microarray processed_data_availab... keyword match keyword match: homo sapiens

tissue blood GSE100922 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood dataset_accession: GSE100922 dataset_title: Expression data from whole blood in CD patients undergoing HSCT. organism: Homo sapiens assay_type: microarray processed_data_availab... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696434 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-E09-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 18; disease location: Ileocoloni... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696435 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-D07-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 18; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696436 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-E05-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location: Colonic; d... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696436 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-E05-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location: Colonic; d... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696437 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-D09-T13_2 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696437 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-D09-T13_2 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696438 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-H05-T26_1 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696438 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-H05-T26_1 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696439 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-A09-T52_3 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696439 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-A09-T52_3 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696440 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-H09-T0_3 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location: Ileocoloni... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696441 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-F09-T13_1 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696442 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-A07-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 36; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696443 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-A07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location: Ileocoloni... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696444 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-B07-T13_2 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696445 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-A07-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696446 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-D05-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 27; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696447 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-E07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location: Ileocoloni... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696448 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-A05-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696449 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-F05-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696450 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-D07-T52_1 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696451 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-B09-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location: Ileocoloni... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696452 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-E05-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696453 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-E09-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696454 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-F09-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696455 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-D05-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 32; disease location: Ileocoloni... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696456 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-B09-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696457 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-H07-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696458 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-C07-T52_1 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 34; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696459 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-C05-T0_3 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location: Ileal+L4; ... controlled vocabulary controlled vocabulary tissue match: blood

tissue intestine GSM2696459 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileal Blood-C05-T0_3 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location: Ileal+L4; ... controlled vocabulary controlled vocabulary tissue match: ileal

tissue blood GSM2696460 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-G07-T13_1 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue intestine GSM2696460 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileal Blood-G07-T13_1 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location... controlled vocabulary controlled vocabulary tissue match: ileal

tissue blood GSM2696461 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-E09-T26_2 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue intestine GSM2696461 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileal Blood-E09-T26_2 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location... controlled vocabulary controlled vocabulary tissue match: ileal

tissue blood GSM2696462 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-H05-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 21; disease location: Ileocoloni... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696463 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-C07-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 21; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696464 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-G09-T26_2 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 21; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696465 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-G05-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location: Colonic; d... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696465 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-G05-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location: Colonic; d... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696466 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-F07-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 36; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696466 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-F07-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 36; disease location... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696467 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-G07-T52_3 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 37; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696467 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-G07-T52_3 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 37; disease location... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696468 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-F07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location: Ileocoloni... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696469 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-H05-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 25; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696470 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-D09-T26_3 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 25; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696471 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-G09-T52_3 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM2696472 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-A09-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location: Colonic; d... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696472 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-A09-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location: Colonic; d... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696473 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-F09-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696473 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-F09-T13_3 Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696474 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-G05-T26_2 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696474 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-G05-T26_2 Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location... controlled vocabulary controlled vocabulary tissue match: colonic

tissue blood GSM2696475 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood Blood-B05-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 30; disease location... controlled vocabulary controlled vocabulary tissue match: blood

tissue colon GSM2696475 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colonic Blood-B05-T52_2 Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 30; disease location... controlled vocabulary controlled vocabulary tissue match: colonic

treatment_status untreated GSM2696434 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-E09-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 18; disease location: Ileocoloni... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696436 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-E05-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location: Colonic; d... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696440 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-H09-T0_3 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location: Ileocoloni... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696443 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-A07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 26; disease location: Ileocoloni... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696447 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-E07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location: Ileocoloni... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696451 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-B09-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 33; disease location: Ileocoloni... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696455 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-D05-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 32; disease location: Ileocoloni... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696459 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-C05-T0_3 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location: Ileal+L4; ... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696462 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-H05-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 21; disease location: Ileocoloni... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696465 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-G05-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 35; disease location: Colonic; d... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696468 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-F07-T0_1 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 24; disease location: Ileocoloni... controlled vocabulary controlled vocabulary treatment status match: baseline

treatment_status untreated GSM2696472 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence baseline Blood-A09-T0_2 Peripheral blood of Crohn's Disease patient collected at baseline tissue: Peripheral blood; diagnosis: Crohn’s disease (CD); age: 29; disease location: Colonic; d... controlled vocabulary controlled vocabulary treatment status match: baseline

Sample Group Preview

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Study totals: Case 42 | Control 0 | Unassigned 0 | Excluded 0 | Ambiguous 0 42 rows shown

Group	Role	Accession	Title	Source / characteristics	Reason
Crohn's disease	Case	GSM2696434	Blood-E09-T0_1	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 18; Disease location: Ileocolonic+L4; Disease phenotype: Inflammatory; Timepoint: W0; Response: Yes; Cdai: 230; Ses-cd: 18; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696435	Blood-D07-T52_2	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 18; Disease location: Ileocolonic+L4; Disease phenotype: Inflammatory; Timepoint: W52; Response: Yes; Cdai: 32.84; Ses-cd: 0; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696436	Blood-E05-T0_2	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 26; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W0; Response: No; Cdai: 419; Ses-cd: 36; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696437	Blood-D09-T13_2	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 26; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W13; Response: No; Cdai: 47.68; Ses-cd: NA; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696438	Blood-H05-T26_1	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 26; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W26; Response: No; Cdai: 72.76; Ses-cd: NA; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696439	Blood-A09-T52_3	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 27; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W52; Response: No; Cdai: 174.45; Ses-cd: 24; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696440	Blood-H09-T0_3	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 35; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W0; Response: Yes; Cdai: 332; Ses-cd: 26; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696441	Blood-F09-T13_1	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 35; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W13; Response: Yes; Cdai: 100.6; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696442	Blood-A07-T52_2	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 36; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W52; Response: Yes; Cdai: 88.22; Ses-cd: 2; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696443	Blood-A07-T0_1	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 26; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W0; Response: Yes; Cdai: 262.1; Ses-cd: 34; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696444	Blood-B07-T13_2	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 27; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W13; Response: Yes; Cdai: 47.72; Ses-cd: NA; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696445	Blood-A07-T26_3	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 27; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W26; Response: Yes; Cdai: 61.5; Ses-cd: 4; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696446	Blood-D05-T52_2	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 27; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W52; Response: Yes; Cdai: 24.74; Ses-cd: 4; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696447	Blood-E07-T0_1	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 33; Disease location: Ileocolonic+L4; Disease phenotype: Inflammatory; Timepoint: W0; Response: Yes; Cdai: 236; Ses-cd: 19; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696448	Blood-A05-T13_3	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 34; Disease location: Ileocolonic+L4; Disease phenotype: Inflammatory; Timepoint: W13; Response: Yes; Cdai: 156.6; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696449	Blood-F05-T26_3	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 34; Disease location: Ileocolonic+L4; Disease phenotype: Inflammatory; Timepoint: W26; Response: Yes; Cdai: 180.29; Ses-cd: 6; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696450	Blood-D07-T52_1	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 35; Disease location: Ileocolonic+L4; Disease phenotype: Inflammatory; Timepoint: W52; Response: Yes; Cdai: 54; Ses-cd: 4; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696451	Blood-B09-T0_2	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 33; Disease location: Ileocolonic; Disease phenotype: Fistulating; Timepoint: W0; Response: No; Cdai: 267.7; Ses-cd: 16; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696452	Blood-E05-T13_3	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 33; Disease location: Ileocolonic; Disease phenotype: Fistulating; Timepoint: W13; Response: No; Cdai: 215; Ses-cd: NA; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696453	Blood-E09-T26_3	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 34; Disease location: Ileocolonic; Disease phenotype: Fistulating; Timepoint: W26; Response: No; Cdai: 232; Ses-cd: 9; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696454	Blood-F09-T52_2	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 34; Disease location: Ileocolonic; Disease phenotype: Fistulating; Timepoint: W52; Response: No; Cdai: 264.8; Ses-cd: 16; Gender: Male	Case marker detected.
Crohn's disease	Case	GSM2696455	Blood-D05-T0_1	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 32; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W0; Response: No; Cdai: 450; Ses-cd: 22; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696456	Blood-B09-T13_3	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 33; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W13; Response: No; Cdai: 333; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696457	Blood-H07-T26_3	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 34; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W26; Response: No; Cdai: 390; Ses-cd: 21; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696458	Blood-C07-T52_1	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 34; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W52; Response: No; Cdai: 382; Ses-cd: 21; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696459	Blood-C05-T0_3	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 24; Disease location: Ileal+L4; Disease phenotype: Stenosing; Timepoint: W0; Response: Yes; Cdai: 162.89; Ses-cd: 8; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696460	Blood-G07-T13_1	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 24; Disease location: Ileal+L4; Disease phenotype: Stenosing; Timepoint: W13; Response: Yes; Cdai: 107; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696461	Blood-E09-T26_2	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 24; Disease location: Ileal+L4; Disease phenotype: Stenosing; Timepoint: W26; Response: Yes; Cdai: 94; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696462	Blood-H05-T0_2	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 21; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W0; Response: Yes; Cdai: 278.66; Ses-cd: 20; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696463	Blood-C07-T13_3	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 21; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W13; Response: Yes; Cdai: 85; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696464	Blood-G09-T26_2	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 21; Disease location: Ileocolonic; Disease phenotype: Inflammatory; Timepoint: W26; Response: Yes; Cdai: 70.76; Ses-cd: 4; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696465	Blood-G05-T0_1	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 35; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W0; Response: Yes; Cdai: 336.64; Ses-cd: 19; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696466	Blood-F07-T26_3	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 36; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W26; Response: Yes; Cdai: 101; Ses-cd: 6; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696467	Blood-G07-T52_3	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 37; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W52; Response: Yes; Cdai: 1.5; Ses-cd: 6; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696468	Blood-F07-T0_1	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 24; Disease location: Ileocolonic+L4; Disease phenotype: Fistulating; Timepoint: W0; Response: Yes; Cdai: 149.37; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696469	Blood-H05-T13_3	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 25; Disease location: Ileocolonic+L4; Disease phenotype: Fistulating; Timepoint: W13; Response: Yes; Cdai: 128.72; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696470	Blood-D09-T26_3	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 25; Disease location: Ileocolonic+L4; Disease phenotype: Fistulating; Timepoint: W26; Response: Yes; Cdai: 40.9; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696471	Blood-G09-T52_3	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 26; Disease location: Ileocolonic+L4; Disease phenotype: Fistulating; Timepoint: W52; Response: Yes; Cdai: 153.1; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696472	Blood-A09-T0_2	Peripheral blood of Crohn's Disease patient collected at baseline Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 29; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W0; Response: Yes; Cdai: 335; Ses-cd: 12; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696473	Blood-F09-T13_3	Peripheral blood of Crohn's Disease patient collected at 13 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 29; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W13; Response: Yes; Cdai: 14; Ses-cd: NA; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696474	Blood-G05-T26_2	Peripheral blood of Crohn's Disease patient collected at 26 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 29; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W26; Response: Yes; Cdai: 14; Ses-cd: 0; Gender: Female	Case marker detected.
Crohn's disease	Case	GSM2696475	Blood-B05-T52_2	Peripheral blood of Crohn's Disease patient collected at 52 weeks after HSCT Tissue: Peripheral blood; Diagnosis: Crohn’s disease (CD); Age: 30; Disease location: Colonic; Disease phenotype: Inflammatory; Timepoint: W52; Response: Yes; Cdai: 10; Ses-cd: 2; Gender: Female	Case marker detected.

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Use as Discovery Cohort