GSE101816

Colonic miR-31 is a molecular stratifier and prognostic determinant of Crohn’s disease [adult]

Whole-study status Not suitable

Dataset does not meet the current suitability threshold.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

View matching samples

30 case / 0 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: bulk RNA-seq
Organism: Homo sapiens
Whole-study samples: 30 samples
Specimen: Biopsy
Reported/interpreted study design: Unclear study design Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Keith BP, Furey TS, Sethupathy P, Sheikh SZ, Furey T
Contact name: Terry Furey
Submission date: 2017-07-24
Last update: 2024-04-04
Organization: The University of North Carolina at Chapel Hill
Department: Department of Genetics
Public date: 2018-10-01
Experiment types: Non-coding RNA profiling by high throughput sequencing
Platforms: GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Series type: SubSeries
SubSeries: Not available
BioProject: PRJNA395579

Summary

The clinical course of Crohn's disease (CD) is highly heterogeneous, confounding effective personalized therapy. There is a critical need to better understand the cellular mechanisms responsible for the variability in disease presentation and response to therapeutic modalities. We carried out whole transcriptome profiling in colon tissue from adult CD patients and controls and found that CD patients segregate into the same two molecular subtypes based on mRNA, long non-coding RNA, or microRNA profiles. MicroRNA-31 (miR-31) in colonic epithelium was identified as a primary contributor to this molecular stratification. We further performed small RNA-seq on formalin-fixed paraffin embedded colon and ileum biopsies obtained at the time of diagnosis from 130 treatment-naïve pediatric CD patients and controls. Colonic expression of miR-31 in pediatric patients was identified as predictive of either medically refractory rectal CD or fibrostenotic ileal CD. Our study reveals miRNAs as important molecular stratifiers and prognostic determinants of CD subtypes.

Overall design

30 small RNA-seq samples from Crohn's disease and non-IBD control fresh tissue ascending colon biopsies.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 30 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Planned source for curated expression experiment links.	No match found
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 3 linked publications 3 DOIs Primary publication Decreased Colonic Activin Receptor-Like Kinase 1 Disrupts Epithelial Barrier Integrity in Patients With Crohn's Disease. Cellular and molecular gastroenterology and hepatology, 2020 PubMed DOI Colonic epithelial miR-31 associates with the development of Crohn's phenotypes. JCI insight, 2018 PubMed DOI Aberrant miR-29 is a predictive feature of severe phenotypes in pediatric Crohn's disease. JCI insight, 2024 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

93 pts

Clarity: 93%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Only one side of the comparison is clearly grouped. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Not ready

55% DE readiness

Contrast completeness

10/25 pts

Only one side of the contrast is present; downstream DE needs both groups.

Minimum group size

0/20 pts

Minimum group size cannot be evaluated until a complete contrast exists.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

0/10 pts

Critical warnings must be resolved before downstream analysis.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No complete case/control contrast is available.
Critical dataset warnings must be resolved.
Secondary RNA assay context should be analyzed separately from ordinary bulk RNA-seq.

Next Steps

Resolve critical warnings before downstream analysis.

Analysis Preparation Checklist

4/6 ready

Group labels reviewed

Blocked

No complete case/control grouping exists yet.

Review the sample grouping table and assign both case and control groups.

Minimum sample count met

Blocked

At least one group has fewer than 2 samples.

Choose a larger dataset or merge only scientifically valid groups.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Review the grouping table for biologically meaningful differences that the automated checks may not detect.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Analysis readiness has blockers that must be resolved before DE.

Analysis preparation checklist contains blocked items.

No complete case/control or treatment/control contrast is available.

At least one comparison group has fewer than two samples.

Critical dataset warnings are present.

Assay context may require expert handling before DESeq2-style analysis.

Study design is model-system or unclear and should be reviewed before analysis.

Why This Is Ranked Here

Tumor vs normal

Not suitable Dataset does not meet the current suitability threshold.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Disease context Crohn's disease, inflammatory bowel disease Disease context came from Normalization rules.
Likely case group Crohn's disease 30 samples
Likely control group No control group detected 0 samples

Intent Interpretation

Downgrade or exclusion reason Comparison: Unclear study design. Specimen: Biopsy. Comparison suitability: 0%. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

Prioritized assay: bulk RNA-seq is the active assay expectation.
Interpreted disease metadata: Crohn's disease, Inflammatory bowel disease.
Processed data is available for downstream review.
External evidence: PubMed links 3 publications; 3 DOIs available: PMID 30282822, PMID 32561494, PMID 38385744.
Publication context: Colonic epithelial miR-31 associates with the development of Crohn's phenotypes.. JCI insight, 2018. PMID 30282822. DOI 10.1172/jci.insight.122788.
Publication context: Decreased Colonic Activin Receptor-Like Kinase 1 Disrupts Epithelial Barrier Integrity in Patients With Crohn's Disease.. Cellular and molecular gastroenterology and hepatology, 2020. PMID 32561494. DOI 10.1016/j.jcmgh.2020.06.005.
Publication context: Aberrant miR-29 is a predictive feature of severe phenotypes in pediatric Crohn's disease.. JCI insight, 2024. PMID 38385744. DOI 10.1172/jci.insight.168800.

Cautions

Comparison: Unclear study design. Specimen: Biopsy. Comparison suitability: 0%.
Downgraded for tissue search because study design or specimen source is unclear.
Unclear study design downgraded for patient tissue tumor-vs-normal search intent.
Missing or unclear metadata. Unclear study design downgraded for patient tissue tumor-vs-normal search intent.
Small RNA, miRNA, circRNA, or extracellular-vesicle RNA context downgraded for primary mRNA tissue ranking.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because secondary RNA assays are not primary mRNA tissue RNA-seq.
Missing or unclear metadata. Comparison - Unclear study design. Specimen - Biopsy. Comparison suitability: 0%.
Missing or unclear metadata. Downgraded for tissue search because study design or specimen source is unclear.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

No clear control group was detected from normalized metadata.
Secondary RNA assay context such as small RNA, miRNA, circRNA, or non-coding RNA was detected.
Patient-tissue tumor-normal intent requires clear tumor-normal grouping.

Normalized Fields

195 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source colon GSM3035127 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035127 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035128 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035128 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035129 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035129 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035130 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035130 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035131 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035131 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035132 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035132 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035133 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035133 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035134 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035134 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035135 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035135 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035136 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035136 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035137 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035137 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035138 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035138 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035139 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035139 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035140 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035140 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035141 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035141 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035142 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035142 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035143 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035143 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035144 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035144 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035145 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035145 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035146 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035146 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035147 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035147 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035148 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035148 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035149 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035149 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035150 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035150 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035151 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035151 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035152 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035152 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035153 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035153 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035154 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035154 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035155 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035155 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM3035156 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM3035156 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon mucosa tissue: Ascending colon mucosa sample-anatomical-source-v1 sample-local anatomical source

assay_type bulk RNA-seq GSE101816 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence bulk rna-seq dataset_accession: GSE101816 dataset_title: Colonic miR-31 is a molecular stratifier and prognostic determinant of Crohn’s disease [adult] organism: Homo sapiens assay_type: bul... keyword match keyword match: bulk rna-seq

collection_method biopsy GSM3035127 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 405 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035128 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 407 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035129 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 420 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035130 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 429 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035131 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 431 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035132 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 51 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035133 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 54 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035134 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 62 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035135 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 63 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035136 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 413 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035137 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 422 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035138 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 450 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035139 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 20 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035140 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 21 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035141 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 25 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035142 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 29 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035143 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 424 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035144 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 64 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035145 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 22 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035146 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 23 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035147 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 27 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035148 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 30 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035149 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 31 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035150 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 32 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035151 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 36 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035152 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 39 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035153 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 43 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035154 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 48 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035155 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 49 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM3035156 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 50 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary collection method match: biopsy

disease Crohn's disease GSE101816 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease dataset_accession: GSE101816 dataset_title: Colonic miR-31 is a molecular stratifier and prognostic determinant of Crohn’s disease [adult] organism: Homo sapiens assay_type: bul... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease inflammatory bowel disease GSE101816 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd dataset_accession: GSE101816 dataset_title: Colonic miR-31 is a molecular stratifier and prognostic determinant of Crohn’s disease [adult] organism: Homo sapiens assay_type: bul... controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM3035127 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 405 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035128 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 407 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035129 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 420 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035130 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 429 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035131 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 431 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035132 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 51 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035133 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 54 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035134 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 62 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035135 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 63 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035136 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 413 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035137 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 422 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035138 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 450 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035139 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 20 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035140 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 21 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035141 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 25 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035142 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 29 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035143 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 424 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM3035144 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease Adult CD 64 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease inflammatory bowel disease GSM3035145 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 22 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035146 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 23 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035147 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 27 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035148 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 30 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035149 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 31 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035150 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 32 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035151 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 36 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035152 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 39 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035153 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 43 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035154 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 48 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035155 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 49 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM3035156 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Adult Non-IBD 50 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary disease match: ibd

organism Homo sapiens GSE101816 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE101816 dataset_title: Colonic miR-31 is a molecular stratifier and prognostic determinant of Crohn’s disease [adult] organism: Homo sapiens assay_type: bul... keyword match keyword match: homo sapiens

primary_tissue primary tissue GSM3035127 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 405 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035128 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 407 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035129 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 420 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035130 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 429 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035131 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 431 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035132 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 51 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035133 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 54 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035134 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 62 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035135 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 63 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035136 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 413 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035137 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 422 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035138 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 450 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035139 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 20 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035140 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 21 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035141 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 25 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035142 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 29 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035143 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 424 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035144 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult CD 64 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035145 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 22 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035146 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 23 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035147 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 27 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035148 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 30 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035149 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 31 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035150 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 32 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035151 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 36 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035152 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 39 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035153 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 43 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035154 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 48 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035155 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 49 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM3035156 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy Adult Non-IBD 50 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary primary tissue match: biopsy

tissue colon GSE101816 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon dataset_accession: GSE101816 dataset_title: Colonic miR-31 is a molecular stratifier and prognostic determinant of Crohn’s disease [adult] organism: Homo sapiens assay_type: bul... controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSE101816 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum dataset_accession: GSE101816 dataset_title: Colonic miR-31 is a molecular stratifier and prognostic determinant of Crohn’s disease [adult] organism: Homo sapiens assay_type: bul... controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035127 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 405 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035128 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 407 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035129 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 420 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035130 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 429 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035131 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 431 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035132 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 51 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035133 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 54 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035134 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 62 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035135 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 63 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Colon-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035136 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 413 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035136 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 413 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035137 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 422 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035137 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 422 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035138 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 450 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035138 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 450 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035139 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 20 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035139 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 20 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035140 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 21 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035140 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 21 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035141 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 25 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035141 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 25 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035142 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 29 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035142 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 29 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035143 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 424 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035143 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 424 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035144 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult CD 64 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSM3035144 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum Adult CD 64 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Crohn's disease; cd group: Ileum-like CD controlled vocabulary controlled vocabulary tissue match: ileum

tissue colon GSM3035145 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 22 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035146 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 23 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035147 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 27 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035148 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 30 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035149 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 31 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035150 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 32 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035151 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 36 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035152 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 39 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035153 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 43 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035154 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 48 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035155 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 49 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM3035156 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Adult Non-IBD 50 Ascending colon mucosal biopsy age: Adult; tissue: Ascending colon mucosa; phenotypic status: Non-IBD controlled vocabulary controlled vocabulary tissue match: colon

Sample Group Preview

30 rows shown Show Hide

Study totals: Case 30 | Control 0 | Unassigned 0 | Excluded 0 | Ambiguous 0 30 rows shown

Group	Role	Accession	Title	Source / characteristics	Reason
Crohn's disease	Case	GSM3035127	Adult CD 405	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035128	Adult CD 407	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035129	Adult CD 420	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035130	Adult CD 429	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035131	Adult CD 431	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035132	Adult CD 51	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035133	Adult CD 54	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035134	Adult CD 62	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035135	Adult CD 63	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Colon-like CD	Case marker detected.
Crohn's disease	Case	GSM3035136	Adult CD 413	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Crohn's disease	Case	GSM3035137	Adult CD 422	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Crohn's disease	Case	GSM3035138	Adult CD 450	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Crohn's disease	Case	GSM3035139	Adult CD 20	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Crohn's disease	Case	GSM3035140	Adult CD 21	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Crohn's disease	Case	GSM3035141	Adult CD 25	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Crohn's disease	Case	GSM3035142	Adult CD 29	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Crohn's disease	Case	GSM3035143	Adult CD 424	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Crohn's disease	Case	GSM3035144	Adult CD 64	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Crohn's disease; Cd group: Ileum-like CD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035145	Adult Non-IBD 22	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035146	Adult Non-IBD 23	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035147	Adult Non-IBD 27	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035148	Adult Non-IBD 30	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035149	Adult Non-IBD 31	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035150	Adult Non-IBD 32	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035151	Adult Non-IBD 36	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035152	Adult Non-IBD 39	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035153	Adult Non-IBD 43	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035154	Adult Non-IBD 48	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035155	Adult Non-IBD 49	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.
Inflammatory bowel disease	Case	GSM3035156	Adult Non-IBD 50	Ascending colon mucosal biopsy Age: Adult; Tissue: Ascending colon mucosa; Phenotypic status: Non-IBD	Case marker detected.

Use as Discovery Cohort

External Validation Finder

Carry Siftome's disease, organism, specimen, assay, data type, and accession into a validation project. Uncertain fields remain Unknown.

Summary

Overall design

Source Evidence

Primary publication

Metadata Quality Components

Analysis Readiness

Blockers

Next Steps

Analysis Preparation Checklist

Bioinformatician Review

Why This Is Ranked Here

Applied Review Decisions

Derived Classifications

Intent Interpretation

Ranking Facts

Supporting evidence

Cautions

Dataset Warnings

Normalized Fields

Sample Group Preview

Use as Discovery Cohort