Mucosal gene expression profiling in ileum of patients with Crohn's disease

Whole-study status Not suitable

Dataset does not meet the current suitability threshold.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

65 case / 12 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: microarray
Organism: Homo sapiens
Whole-study samples: 77 samples
Specimen: Biopsy
Reported/interpreted study design: Disease/model vs control Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Verstockt S, Van der Goten J, Van Lommel L, Schuit F, Van Assche G, Rutgeerts P, Ferrante M, Vermeire S, Arijs I
Contact name: Sare Verstockt
Submission date: 2017-08-01
Last update: 2021-07-25
Organization: KU Leuven
Department: Not available
Public date: 2019-03-01
Experiment types: Expression profiling by array
Platforms: GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Series type: SubSeries
SubSeries: Not available
BioProject: PRJNA396762

Summary

In this study, we investigated gene expression profiles in ileal mucosa from CD patients in different settings (post-operative CD (Rutgeerts score i0); post-operative recurrent CD (i1), post-operative recurrent CD (≥i2b), newly diagnosed CD and late stage CD)) and controls.

Overall design

Ileal mucosal biopsies were obtained during endoscopy from 65 CD (3 i0 CD, 6 post-operative recurrent (POR) i1 CD, 24 POR (≥i2b), 18 new and 14 late) patients and 12 normal controls. Total RNA was isolated from ileal mucosal biopsies, labelled and hybridized to Affymetrix Genechip Human Gene 1.0ST Arrays.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 77 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Curated expression experiment linkage and source URL. Expression Atlas accession E-GEOD-102133	Available
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 9 linked publications 9 DOIs Primary publication Gene and Mirna Regulatory Networks During Different Stages of Crohn's Disease. Journal of Crohn's & colitis, 2019 PubMed DOI Related publications CrohnTwin-X: An explainable digital twin framework for predicting postoperative recurrence in Crohn's disease using multi-omics and clinical features. Computer methods and programs in biomedicine, 2026 PubMed DOI The critical role of COL1A1 revealed by integrated bioinformatics analysis of differentially-expressed genes in colorectal cancer and inflammatory bowel disease. Computers in biology and medicine, 2025 PubMed DOI Uncovering common disease mechanisms and critical biomarkers in Crohn's disease with concurrent psoriasis and exploring potential therapeutic agents. PloS one, 2025 PubMed DOI Identifying hub genes and miRNAs in Crohn's disease by bioinformatics analysis. Frontiers in genetics, 2022 PubMed DOI Identification of gene signatures associated with ulcerative colitis and the association with immune infiltrates in colon cancer. Frontiers in immunology, 2023 PubMed DOI Analysis of ferroptosis-associated genes in Crohn's disease based on bioinformatics. Frontiers in medicine, 2022 PubMed DOI Development and Experimental Validation of Machine Learning-Based Disulfidptosis-Related Ferroptosis Biomarkers in Inflammatory Bowel Disease. Genes, 2025 PubMed DOI Identification of differentially expressed genes associated with ferroptosis in Crohn's disease. Experimental and therapeutic medicine, 2024 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

100 pts

Clarity: 100%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Ready after review

97% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

Verify the proposed sample assignments and case-versus-control comparison against the GEO metadata before using them in DESeq2 or another differential-expression tool.
Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Review the grouping table for biologically meaningful differences that the automated checks may not detect.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Assay context may require expert handling before DESeq2-style analysis.

Why This Is Ranked Here

Tumor vs normal

Not suitable Dataset does not meet the current suitability threshold.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Assay differs from search intent Microarray Search intent expects bulk RNA-seq. Assay came from Normalization rules.
Disease context Crohn's disease Disease context came from Normalization rules.
Likely case group Crohn's disease 65 samples
Likely control group Healthy control 12 samples

Intent Interpretation

Downgrade or exclusion reason Downgraded assay: microarray cohorts are separated from the RNA-seq intent. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

Comparison: Disease/model vs control. Specimen: Biopsy. Comparison suitability: 0%.
Interpreted disease metadata: Crohn's disease.
Processed data is available for downstream review.
External evidence: Expression Atlas curated experiment link is available.
External evidence: PubMed links 9 publications; 9 DOIs available: PMID 30657881, PMID 36118873, PMID 36714107, PMID 36742294, PMID 38274342.
Publication context: Gene and Mirna Regulatory Networks During Different Stages of Crohn's Disease.. Journal of Crohn's & colitis, 2019. PMID 30657881. DOI 10.1093/ecco-jcc/jjz007.
Publication context: Identifying hub genes and miRNAs in Crohn's disease by bioinformatics analysis.. Frontiers in genetics, 2022. PMID 36118873. DOI 10.3389/fgene.2022.950136.
Publication context: Analysis of ferroptosis-associated genes in Crohn's disease based on bioinformatics.. Frontiers in medicine, 2022. PMID 36714107. DOI 10.3389/fmed.2022.1058076.
Publication context: 6 additional linked PubMed publications are available.

Cautions

Downgraded assay: microarray cohorts are separated from the RNA-seq intent.
Disease/control design without a tumor/normal comparison is outside tumor/normal triage.
Microarray expression context downgraded below primary bulk RNA-seq for the default tissue ranking.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because microarray cohorts should be compared separately from RNA-seq cohorts.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

Microarray expression context was detected; compare separately from RNA-seq cohorts.
Microarray datasets are downgraded in the patient-tissue tumor-normal intent unless secondary assays are explicitly enabled.

Normalized Fields

389 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source ileum GSM2728650 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728651 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728652 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728653 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728654 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728655 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728656 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728657 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728658 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728659 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728660 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728661 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728662 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728663 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728664 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728665 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728666 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728667 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728668 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728669 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728670 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728671 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728672 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728673 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728674 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728675 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728676 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728677 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728678 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728679 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728680 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728681 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728682 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728683 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728684 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728685 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728686 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728687 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728688 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728689 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728690 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728691 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728692 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728693 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728694 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728695 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728696 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728697 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728698 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728699 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728700 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728701 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728702 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728703 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728704 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728705 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728706 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728707 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728708 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728709 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728710 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728711 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728712 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728713 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728714 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728715 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728716 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728717 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728718 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728719 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728720 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728721 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728722 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728723 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728724 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728725 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2728726 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ileum tissue: ileum sample-anatomical-source-v1 sample-local anatomical source

assay_type microarray GSE102133 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence microarray dataset_accession: GSE102133 dataset_title: Mucosal gene expression profiling in ileum of patients with Crohn's disease organism: Homo sapiens assay_type: microarray processed_d... keyword match keyword match: microarray

collection_method biopsy GSM2728650 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_01 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728651 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_02 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728652 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_03 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728653 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_04 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728654 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_05 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728655 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_06 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728656 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_07 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728657 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_08 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728658 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_09 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728659 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_10 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728660 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_11 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728661 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_12 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728662 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy i0_CD_01 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728663 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy i0_CD_02 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728664 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy i0_CD_03 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728665 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_01 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728666 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_02 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728667 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_03 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728668 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_04 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728669 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_05 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728670 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_06 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728671 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_07 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728672 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_08 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728673 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_09 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728674 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_10 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728675 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_11 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728676 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_12 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728677 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_13 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728678 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_14 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728679 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_01 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728680 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_02 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728681 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_03 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728682 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_04 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728683 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_05 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728684 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_06 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728685 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_07 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728686 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_08 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728687 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_09 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728688 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_10 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728689 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_11 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728690 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_12 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728691 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_13 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728692 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_14 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728693 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_15 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728694 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_16 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728695 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_17 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728696 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_18 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728697 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_01 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728698 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_02 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728699 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_03 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728700 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_04 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728701 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_05 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728702 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_06 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728703 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_07 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728704 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_08 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728705 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_09 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728706 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_10 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728707 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_11 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728708 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_12 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728709 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_13 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728710 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_14 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728711 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_15 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728712 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_16 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728713 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_17 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728714 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_18 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728715 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_19 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728716 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_20 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728717 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_21 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728718 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_22 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728719 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_23 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728720 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_24 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728721 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_01 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728722 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_02 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728723 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_03 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728724 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_04 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728725 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_05 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2728726 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_06 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary collection method match: biopsy

disease Crohn's disease GSE102133 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease dataset_accession: GSE102133 dataset_title: Mucosal gene expression profiling in ileum of patients with Crohn's disease organism: Homo sapiens assay_type: microarray processed_d... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728662 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease i0_CD_01 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728663 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease i0_CD_02 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728664 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease i0_CD_03 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728665 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_01 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728666 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_02 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728667 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_03 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728668 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_04 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728669 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_05 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728670 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_06 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728671 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_07 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728672 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_08 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728673 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_09 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728674 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_10 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728675 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_11 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728676 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_12 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728677 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_13 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728678 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease late_CD_14 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728679 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_01 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728680 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_02 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728681 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_03 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728682 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_04 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728683 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_05 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728684 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_06 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728685 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_07 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728686 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_08 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728687 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_09 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728688 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_10 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728689 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_11 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728690 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_12 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728691 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_13 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728692 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_14 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728693 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_15 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728694 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_16 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728695 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_17 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728696 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease new_CD_18 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728697 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_01 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728698 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_02 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728699 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_03 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728700 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_04 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728701 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_05 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728702 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_06 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728703 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_07 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728704 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_08 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728705 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_09 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728706 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_10 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728707 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_11 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728708 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_12 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728709 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_13 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728710 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_14 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728711 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_15 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728712 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_16 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728713 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_17 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728714 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_18 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728715 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_19 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728716 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_20 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728717 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_21 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728718 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_22 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728719 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_23 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728720 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_CD_24 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728721 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_i1_CD_01 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728722 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_i1_CD_02 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728723 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_i1_CD_03 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728724 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_i1_CD_04 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728725 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_i1_CD_05 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease Crohn's disease GSM2728726 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease POR_i1_CD_06 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

organism Homo sapiens GSE102133 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE102133 dataset_title: Mucosal gene expression profiling in ileum of patients with Crohn's disease organism: Homo sapiens assay_type: microarray processed_d... keyword match keyword match: homo sapiens

primary_tissue primary tissue GSM2728650 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_01 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728651 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_02 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728652 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_03 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728653 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_04 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728654 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_05 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728655 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_06 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728656 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_07 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728657 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_08 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728658 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_09 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728659 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_10 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728660 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_11 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728661 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy control_12 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728662 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy i0_CD_01 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728663 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy i0_CD_02 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728664 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy i0_CD_03 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728665 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_01 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728666 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_02 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728667 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_03 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728668 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_04 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728669 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_05 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728670 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_06 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728671 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_07 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728672 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_08 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728673 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_09 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728674 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_10 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728675 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_11 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728676 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_12 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728677 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_13 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728678 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy late_CD_14 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728679 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_01 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728680 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_02 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728681 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_03 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728682 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_04 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728683 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_05 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728684 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_06 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728685 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_07 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728686 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_08 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728687 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_09 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728688 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_10 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728689 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_11 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728690 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_12 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728691 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_13 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728692 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_14 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728693 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_15 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728694 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_16 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728695 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_17 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728696 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy new_CD_18 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728697 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_01 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728698 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_02 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728699 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_03 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728700 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_04 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728701 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_05 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728702 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_06 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728703 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_07 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728704 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_08 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728705 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_09 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728706 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_10 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728707 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_11 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728708 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_12 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728709 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_13 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728710 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_14 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728711 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_15 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728712 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_16 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728713 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_17 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728714 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_18 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728715 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_19 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728716 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_20 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728717 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_21 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728718 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_22 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728719 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_23 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728720 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_CD_24 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728721 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_01 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728722 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_02 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728723 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_03 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728724 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_04 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728725 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_05 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2728726 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy POR_i1_CD_06 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

sample_type normal tissue GSM2728650 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_01 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728651 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_02 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728652 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_03 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728653 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_04 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728654 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_05 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728655 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_06 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728656 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_07 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728657 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_08 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728658 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_09 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728659 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_10 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728660 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_11 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM2728661 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal control_12 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary sample type match: normal

tissue intestine GSE102133 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum dataset_accession: GSE102133 dataset_title: Mucosal gene expression profiling in ileum of patients with Crohn's disease organism: Homo sapiens assay_type: microarray processed_d... controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728650 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_01 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728651 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_02 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728652 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_03 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728653 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_04 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728654 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_05 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728655 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_06 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728656 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_07 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728657 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_08 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728658 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_09 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728659 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_10 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728660 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_11 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728661 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum control_12 Biopsy from normal ileal mucosa of control individual disease: normal; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728662 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum i0_CD_01 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728663 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum i0_CD_02 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728664 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum i0_CD_03 Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728665 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_01 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728666 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_02 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728667 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_03 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728668 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_04 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728669 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_05 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728670 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_06 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728671 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_07 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728672 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_08 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728673 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_09 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728674 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_10 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728675 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_11 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728676 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_12 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728677 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_13 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728678 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum late_CD_14 Biopsy from ileal mucosa of a late stage CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728679 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_01 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728680 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_02 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728681 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_03 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728682 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_04 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728683 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_05 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728684 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_06 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728685 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_07 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728686 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_08 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728687 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_09 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728688 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_10 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728689 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_11 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728690 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_12 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728691 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_13 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728692 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_14 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728693 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_15 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728694 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_16 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728695 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_17 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728696 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum new_CD_18 Biopsy from ileal mucosa of a newly diagnosed CD patient disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728697 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_01 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728698 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_02 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728699 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_03 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728700 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_04 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728701 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_05 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728702 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_06 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728703 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_07 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728704 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_08 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728705 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_09 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728706 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_10 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728707 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_11 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728708 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_12 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728709 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_13 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728710 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_14 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728711 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_15 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728712 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_16 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728713 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_17 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728714 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_18 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728715 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_19 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728716 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_20 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728717 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_21 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728718 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_22 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728719 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_23 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728720 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_CD_24 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728721 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_i1_CD_01 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728722 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_i1_CD_02 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728723 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_i1_CD_03 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728724 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_i1_CD_04 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728725 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_i1_CD_05 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

tissue intestine GSM2728726 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum POR_i1_CD_06 Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score i1) disease: Crohn's disease; tissue: ileum controlled vocabulary controlled vocabulary tissue match: ileum

Sample Group Preview

showing 62 of 77 preview rows Show Hide

Study totals: Case 65 | Control 12 | Unassigned 0 | Excluded 0 | Ambiguous 0 showing 62 of 77 preview rows

Group	Role	Accession	Title	Source / characteristics	Reason
Crohn's disease	Case	GSM2728662	i0_CD_01	Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728663	i0_CD_02	Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728664	i0_CD_03	Biopsy from ileal mucosa of a post-operative CD patient (Rutgeert score i0) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728665	Late_CD_01	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728666	Late_CD_02	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728667	Late_CD_03	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728668	Late_CD_04	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728669	Late_CD_05	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728670	Late_CD_06	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728671	Late_CD_07	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728672	Late_CD_08	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728673	Late_CD_09	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728674	Late_CD_10	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728675	Late_CD_11	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728676	Late_CD_12	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728677	Late_CD_13	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728678	Late_CD_14	Biopsy from ileal mucosa of a late stage CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728679	New_CD_01	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728680	New_CD_02	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728681	New_CD_03	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728682	New_CD_04	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728683	New_CD_05	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728684	New_CD_06	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728685	New_CD_07	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728686	New_CD_08	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728687	New_CD_09	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728688	New_CD_10	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728689	New_CD_11	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728690	New_CD_12	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728691	New_CD_13	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728692	New_CD_14	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728693	New_CD_15	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728694	New_CD_16	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728695	New_CD_17	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728696	New_CD_18	Biopsy from ileal mucosa of a newly diagnosed CD patient Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728697	POR_CD_01	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728698	POR_CD_02	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728699	POR_CD_03	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728700	POR_CD_04	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728701	POR_CD_05	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728702	POR_CD_06	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728703	POR_CD_07	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728704	POR_CD_08	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728705	POR_CD_09	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728706	POR_CD_10	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728707	POR_CD_11	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728708	POR_CD_12	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728709	POR_CD_13	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728710	POR_CD_14	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
Crohn's disease	Case	GSM2728711	POR_CD_15	Biopsy from ileal mucosa of a post-operative recurrent CD patient (Rutgeerts score ≥i2b) Disease: Crohn's disease; Tissue: Ileum	Case marker detected.
15 additional case samples are hidden from this preview.
Healthy control	Control	GSM2728650	Control_01	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728651	Control_02	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728652	Control_03	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728653	Control_04	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728654	Control_05	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728655	Control_06	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728656	Control_07	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728657	Control_08	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728658	Control_09	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728659	Control_10	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728660	Control_11	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.
Healthy control	Control	GSM2728661	Control_12	Biopsy from normal ileal mucosa of control individual Disease: Normal; Tissue: Ileum	Sample-local control marker detected.

Use as Discovery Cohort

External Validation Finder

Carry Siftome's disease, organism, specimen, assay, data type, and accession into a validation project. Uncertain fields remain Unknown.

Summary

Overall design

Source Evidence

Primary publication

Related publications

Metadata Quality Components

Analysis Readiness

Blockers

Next Steps

Analysis Preparation Checklist

Bioinformatician Review

Why This Is Ranked Here

Applied Review Decisions

Derived Classifications

Intent Interpretation

Ranking Facts

Supporting evidence

Cautions

Dataset Warnings

Normalized Fields

Sample Group Preview

Use as Discovery Cohort