Matching samples

GSE10791 · Gene expression profiles in sigmoid colon biopsies from healthy and patients with ulcerative colitis

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Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

1 case / 1 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (2)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM272418

Uncertain

Gene expression in colon from Healthy controls

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • Gene expression in colon from Healthy controls sigmoid colon biopsy sigmoid colon biopsy from 5 normal healthy individuals
        • Gene expression in colon from Healthy controls sigmoid colon biopsy sigmoid colon biopsy from 5 normal healthy individuals
      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • specimen category excludes: Biofluid — Insufficient evidence
          • The required value is not reported.
          • Gene expression in colon from Healthy controls sigmoid colon biopsy sigmoid colon biopsy from 5 normal healthy individuals
          • Gene expression in colon from Healthy controls sigmoid colon biopsy sigmoid colon biopsy from 5 normal healthy individuals
        Source metadata
        Source name
        sigmoid colon biopsy
        Characteristics
        sigmoid colon biopsy from 5 normal healthy individuals
        Description
        Not reported
        Indexed organism evidence
        INFERRED · PARENT_INHERITED: Not reported
        Indexed assay evidence
        INFERRED · PARENT_INHERITED: Not reported
        Source
        GEO
        Original indexed metadata
        sample_accession: GSM272418
sample_title: Gene expression in colon from Healthy controls
source_name: sigmoid colon biopsy
characteristics: sigmoid colon biopsy from 5 normal healthy individuals

        GSM272419

        Uncertain

        gene expression profile in sigmoid colon of UC patient

        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

        Requirements and decision evidence
        • organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • specimen category: Tissue or biopsy — Insufficient evidence
              • The required value is not reported.
              • gene expression profile in sigmoid colon of UC patient sigmoid colon biopsy sigmoid colon biopsy from 6 patients with ulcerative colitis (UC).
              • gene expression profile in sigmoid colon of UC patient sigmoid colon biopsy sigmoid colon biopsy from 6 patients with ulcerative colitis (UC).
            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • specimen category excludes: Biofluid — Insufficient evidence
                • The required value is not reported.
                • gene expression profile in sigmoid colon of UC patient sigmoid colon biopsy sigmoid colon biopsy from 6 patients with ulcerative colitis (UC).
                • gene expression profile in sigmoid colon of UC patient sigmoid colon biopsy sigmoid colon biopsy from 6 patients with ulcerative colitis (UC).
              Source metadata
              Source name
              sigmoid colon biopsy
              Characteristics
              sigmoid colon biopsy from 6 patients with ulcerative colitis (UC).
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM272419
sample_title: gene expression profile in sigmoid colon of UC patient
source_name: sigmoid colon biopsy
characteristics: sigmoid colon biopsy from 6 patients with ulcerative colitis (UC).

              Excluded samples (0)

              No excluded samples.