GSE112057 matching samples

GSM3056394

Excluded

Sample001_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample001_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample001_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056394
sample_title: Sample001_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056395

Excluded

Sample002_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample002_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample002_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056395
sample_title: Sample002_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056396

Excluded

Sample003_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample003_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample003_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056396
sample_title: Sample003_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056397

Excluded

Sample004_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample004_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample004_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056397
sample_title: Sample004_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056398

Excluded

Sample005_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample005_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample005_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056398
sample_title: Sample005_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056399

Excluded

Sample006_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample006_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample006_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056399
sample_title: Sample006_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056400

Excluded

Sample007_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample007_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample007_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056400
sample_title: Sample007_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056401

Excluded

Sample008_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample008_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample008_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample008_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample008_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056401
sample_title: Sample008_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056402

Excluded

Sample009_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample009_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample009_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample009_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample009_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056402
sample_title: Sample009_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056403

Excluded

Sample010_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample010_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample010_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample010_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample010_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056403
sample_title: Sample010_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056404

Excluded

Sample011_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample011_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample011_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample011_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample011_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056404
sample_title: Sample011_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056405

Excluded

Sample012_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample012_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample012_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample012_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample012_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056405
sample_title: Sample012_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056406

Excluded

Sample013_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample013_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample013_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample013_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample013_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 1; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056406
sample_title: Sample013_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 1; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056407

Excluded

Sample014_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample014_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1.5; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample014_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1.5; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample014_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1.5; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample014_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1.5; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 1.5; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056407
sample_title: Sample014_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 1.5; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056408

Excluded

Sample015_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample015_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample015_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample015_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample015_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056408
sample_title: Sample015_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056409

Excluded

Sample016_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample016_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample016_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample016_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample016_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056409
sample_title: Sample016_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056410

Excluded

Sample017_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample017_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample017_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample017_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample017_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056410
sample_title: Sample017_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056411

Excluded

Sample018_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample018_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample018_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056411
sample_title: Sample018_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056412

Excluded

Sample019_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample019_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample019_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056412
sample_title: Sample019_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056413

Excluded

Sample020_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample020_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample020_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056413
sample_title: Sample020_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056414

Excluded

Sample021_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample021_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample021_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056414
sample_title: Sample021_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056415

Excluded

Sample022_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample022_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample022_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample022_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample022_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056415
sample_title: Sample022_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056416

Excluded

Sample023_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample023_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample023_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample023_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample023_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056416
sample_title: Sample023_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056417

Excluded

Sample024_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample024_Systemic JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample024_Systemic JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample024_Systemic JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample024_Systemic JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056417
sample_title: Sample024_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056418

Excluded

Sample025_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample025_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample025_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample025_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample025_Systemic JIA Whole Blood gender: Female; age at diagnosis: 1.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 1.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056418
sample_title: Sample025_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 1.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056419

Excluded

Sample026_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample026_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample026_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample026_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample026_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056419
sample_title: Sample026_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056420

Excluded

Sample027_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample027_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample027_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample027_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample027_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056420
sample_title: Sample027_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056421

Excluded

Sample028_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample028_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample028_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample028_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample028_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056421
sample_title: Sample028_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056422

Excluded

Sample029_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample029_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample029_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample029_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample029_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056422
sample_title: Sample029_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056423

Excluded

Sample030_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample030_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample030_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056423
sample_title: Sample030_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056424

Excluded

Sample031_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample031_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 26; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample031_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 26; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 26; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056424
sample_title: Sample031_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 26; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056425

Excluded

Sample032_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample032_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 17; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample032_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 17; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 17; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056425
sample_title: Sample032_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 17; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056426

Excluded

Sample033_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample033_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample033_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056426
sample_title: Sample033_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056427

Excluded

Sample034_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample034_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample034_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056427
sample_title: Sample034_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056428

Excluded

Sample035_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample035_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 18; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample035_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 18; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 18; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056428
sample_title: Sample035_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 18; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056429

Excluded

Sample036_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample036_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample036_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056429
sample_title: Sample036_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056430

Excluded

Sample037_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample037_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample037_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056430
sample_title: Sample037_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056431

Excluded

Sample038_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample038_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample038_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056431
sample_title: Sample038_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056432

Excluded

Sample039_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample039_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample039_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056432
sample_title: Sample039_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056433

Excluded

Sample040_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample040_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample040_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056433
sample_title: Sample040_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056434

Excluded

Sample041_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample041_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample041_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056434
sample_title: Sample041_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056435

Excluded

Sample042_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample042_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample042_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056435
sample_title: Sample042_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056436

Excluded

Sample043_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample043_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample043_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056436
sample_title: Sample043_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056437

Excluded

Sample044_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample044_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample044_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample044_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample044_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056437
sample_title: Sample044_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056438

Excluded

Sample045_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample045_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample045_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample045_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample045_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 10; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056438
sample_title: Sample045_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 10; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056439

Excluded

Sample046_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample046_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample046_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056439
sample_title: Sample046_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056440

Excluded

Sample047_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample047_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 26; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample047_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 26; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 26; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056440
sample_title: Sample047_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 26; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056441

Excluded

Sample048_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample048_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample048_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056441
sample_title: Sample048_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056442

Excluded

Sample049_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample049_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample049_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056442
sample_title: Sample049_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056443

Excluded

Sample050_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample050_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample050_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056443
sample_title: Sample050_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056444

Excluded

Sample051_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample051_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample051_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056444
sample_title: Sample051_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056445

Excluded

Sample052_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample052_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample052_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056445
sample_title: Sample052_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056446

Excluded

Sample053_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample053_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample053_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample053_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample053_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056446
sample_title: Sample053_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056447

Excluded

Sample054_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample054_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample054_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample054_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample054_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056447
sample_title: Sample054_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056448

Excluded

Sample055_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample055_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample055_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample055_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample055_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056448
sample_title: Sample055_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056449

Excluded

Sample056_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample056_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample056_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample056_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample056_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056449
sample_title: Sample056_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056450

Excluded

Sample057_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample057_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample057_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample057_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample057_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056450
sample_title: Sample057_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056451

Excluded

Sample058_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample058_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample058_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample058_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample058_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056451
sample_title: Sample058_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056452

Excluded

Sample059_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample059_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample059_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample059_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample059_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056452
sample_title: Sample059_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056453

Excluded

Sample060_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample060_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample060_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample060_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample060_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056453
sample_title: Sample060_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056454

Excluded

Sample061_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample061_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample061_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample061_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample061_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056454
sample_title: Sample061_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056455

Excluded

Sample062_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample062_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample062_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample062_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample062_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056455
sample_title: Sample062_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056456

Excluded

Sample063_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample063_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample063_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample063_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample063_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056456
sample_title: Sample063_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056457

Excluded

Sample064_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample064_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample064_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample064_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample064_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056457
sample_title: Sample064_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056458

Excluded

Sample065_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample065_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample065_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056458
sample_title: Sample065_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056459

Excluded

Sample066_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample066_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample066_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056459
sample_title: Sample066_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056460

Excluded

Sample067_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample067_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample067_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056460
sample_title: Sample067_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056461

Excluded

Sample068_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample068_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample068_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056461
sample_title: Sample068_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056462

Excluded

Sample069_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample069_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample069_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056462
sample_title: Sample069_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056463

Excluded

Sample070_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample070_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample070_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056463
sample_title: Sample070_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056464

Excluded

Sample071_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample071_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample071_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056464
sample_title: Sample071_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056465

Excluded

Sample072_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample072_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample072_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample072_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample072_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056465
sample_title: Sample072_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056466

Excluded

Sample073_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample073_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample073_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample073_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample073_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056466
sample_title: Sample073_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056467

Excluded

Sample074_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample074_Systemic JIA Whole Blood gender: Male; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample074_Systemic JIA Whole Blood gender: Male; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample074_Systemic JIA Whole Blood gender: Male; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample074_Systemic JIA Whole Blood gender: Male; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056467
sample_title: Sample074_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056468

Excluded

Sample075_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample075_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample075_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample075_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample075_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056468
sample_title: Sample075_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056469

Excluded

Sample076_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample076_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample076_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample076_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample076_Systemic JIA Whole Blood gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056469
sample_title: Sample076_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 1; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056470

Excluded

Sample077_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample077_Systemic JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample077_Systemic JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample077_Systemic JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample077_Systemic JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056470
sample_title: Sample077_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056471

Excluded

Sample078_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample078_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample078_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample078_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample078_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056471
sample_title: Sample078_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056472

Excluded

Sample079_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample079_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample079_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample079_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample079_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056472
sample_title: Sample079_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056473

Excluded

Sample080_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample080_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample080_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample080_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample080_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056473
sample_title: Sample080_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056474

Excluded

Sample081_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample081_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample081_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056474
sample_title: Sample081_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056475

Excluded

Sample082_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample082_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample082_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056475
sample_title: Sample082_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056476

Excluded

Sample083_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample083_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample083_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056476
sample_title: Sample083_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056477

Excluded

Sample084_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample084_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample084_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056477
sample_title: Sample084_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056478

Excluded

Sample085_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample085_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample085_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample085_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample085_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056478
sample_title: Sample085_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056479

Excluded

Sample086_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample086_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample086_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample086_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample086_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056479
sample_title: Sample086_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056480

Excluded

Sample087_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample087_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample087_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample087_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample087_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056480
sample_title: Sample087_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056481

Excluded

Sample088_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample088_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample088_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample088_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample088_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056481
sample_title: Sample088_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056482

Excluded

Sample089_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample089_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample089_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample089_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample089_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056482
sample_title: Sample089_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056483

Excluded

Sample090_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample090_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample090_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample090_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample090_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056483
sample_title: Sample090_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056484

Excluded

Sample091_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample091_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample091_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample091_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample091_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056484
sample_title: Sample091_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 11; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056485

Excluded

Sample092_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample092_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample092_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample092_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample092_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056485
sample_title: Sample092_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056486

Excluded

Sample093_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample093_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample093_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample093_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample093_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056486
sample_title: Sample093_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056487

Excluded

Sample094_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample094_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 3; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample094_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 3; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample094_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 3; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample094_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 3; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 3; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056487
sample_title: Sample094_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 3; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056488

Excluded

Sample095_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample095_Systemic JIA Whole Blood gender: Male; age at diagnosis: 3; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample095_Systemic JIA Whole Blood gender: Male; age at diagnosis: 3; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample095_Systemic JIA Whole Blood gender: Male; age at diagnosis: 3; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample095_Systemic JIA Whole Blood gender: Male; age at diagnosis: 3; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 3; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056488
sample_title: Sample095_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 3; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056489

Excluded

Sample096_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample096_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample096_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample096_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample096_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056489
sample_title: Sample096_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056490

Excluded

Sample097_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample097_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample097_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056490
sample_title: Sample097_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056491

Excluded

Sample098_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample098_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample098_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056491
sample_title: Sample098_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056492

Excluded

Sample099_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample099_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample099_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056492
sample_title: Sample099_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056493

Excluded

Sample100_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample100_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample100_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056493
sample_title: Sample100_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056494

Excluded

Sample101_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample101_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample101_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample101_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample101_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056494
sample_title: Sample101_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056495

Excluded

Sample102_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample102_Systemic JIA Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample102_Systemic JIA Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample102_Systemic JIA Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample102_Systemic JIA Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056495
sample_title: Sample102_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056496

Excluded

Sample103_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample103_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample103_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample103_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample103_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056496
sample_title: Sample103_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056497

Excluded

Sample104_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample104_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample104_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample104_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample104_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056497
sample_title: Sample104_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056498

Excluded

Sample105_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample105_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample105_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample105_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample105_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056498
sample_title: Sample105_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056499

Excluded

Sample106_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample106_Systemic JIA Whole Blood gender: Male; age at diagnosis: 2.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample106_Systemic JIA Whole Blood gender: Male; age at diagnosis: 2.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample106_Systemic JIA Whole Blood gender: Male; age at diagnosis: 2.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample106_Systemic JIA Whole Blood gender: Male; age at diagnosis: 2.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 2.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056499
sample_title: Sample106_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 2.5; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056500

Excluded

Sample107_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample107_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample107_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample107_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample107_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056500
sample_title: Sample107_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056501

Excluded

Sample108_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample108_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample108_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample108_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample108_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056501
sample_title: Sample108_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056502

Excluded

Sample109_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample109_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample109_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample109_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample109_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056502
sample_title: Sample109_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056503

Excluded

Sample110_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample110_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample110_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample110_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample110_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056503
sample_title: Sample110_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056504

Excluded

Sample111_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample111_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample111_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056504
sample_title: Sample111_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056505

Excluded

Sample112_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample112_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample112_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056505
sample_title: Sample112_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056506

Excluded

Sample113_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample113_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample113_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056506
sample_title: Sample113_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056507

Excluded

Sample114_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample114_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample114_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056507
sample_title: Sample114_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056508

Excluded

Sample115_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample115_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample115_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056508
sample_title: Sample115_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 12; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056509

Excluded

Sample116_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample116_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample116_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056509
sample_title: Sample116_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056510

Excluded

Sample117_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample117_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample117_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample117_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample117_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056510
sample_title: Sample117_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056511

Excluded

Sample118_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample118_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample118_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample118_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample118_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056511
sample_title: Sample118_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056512

Excluded

Sample119_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample119_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample119_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample119_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample119_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056512
sample_title: Sample119_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 12; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056513

Excluded

Sample120_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample120_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample120_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample120_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample120_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056513
sample_title: Sample120_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056514

Excluded

Sample121_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample121_Systemic JIA Whole Blood gender: Female; age at diagnosis: 0.7; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample121_Systemic JIA Whole Blood gender: Female; age at diagnosis: 0.7; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample121_Systemic JIA Whole Blood gender: Female; age at diagnosis: 0.7; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample121_Systemic JIA Whole Blood gender: Female; age at diagnosis: 0.7; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 0.7; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056514
sample_title: Sample121_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 0.7; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056515

Excluded

Sample122_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample122_Systemic JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample122_Systemic JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample122_Systemic JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample122_Systemic JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056515
sample_title: Sample122_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056516

Excluded

Sample123_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample123_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample123_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample123_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample123_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056516
sample_title: Sample123_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056517

Excluded

Sample124_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample124_Systemic JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample124_Systemic JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample124_Systemic JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample124_Systemic JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056517
sample_title: Sample124_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056518

Excluded

Sample125_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample125_Systemic JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample125_Systemic JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample125_Systemic JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample125_Systemic JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056518
sample_title: Sample125_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056519

Excluded

Sample126_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample126_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample126_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056519
sample_title: Sample126_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056520

Excluded

Sample127_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample127_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample127_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056520
sample_title: Sample127_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056521

Excluded

Sample128_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample128_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample128_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056521
sample_title: Sample128_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056522

Excluded

Sample129_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample129_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample129_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056522
sample_title: Sample129_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056523

Excluded

Sample130_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample130_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample130_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056523
sample_title: Sample130_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056524

Excluded

Sample131_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample131_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample131_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056524
sample_title: Sample131_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056525

Excluded

Sample132_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample132_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample132_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056525
sample_title: Sample132_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056526

Excluded

Sample133_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample133_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample133_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample133_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample133_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056526
sample_title: Sample133_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056527

Excluded

Sample134_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample134_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample134_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample134_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample134_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056527
sample_title: Sample134_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056528

Excluded

Sample135_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample135_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample135_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample135_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample135_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056528
sample_title: Sample135_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056529

Excluded

Sample136_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample136_Systemic JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample136_Systemic JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample136_Systemic JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample136_Systemic JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056529
sample_title: Sample136_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056530

Excluded

Sample137_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample137_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample137_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample137_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample137_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056530
sample_title: Sample137_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 9; ancestry: Black; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056531

Excluded

Sample138_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample138_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample138_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample138_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample138_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056531
sample_title: Sample138_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056532

Excluded

Sample139_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample139_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample139_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample139_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample139_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056532
sample_title: Sample139_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056533

Excluded

Sample140_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample140_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample140_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample140_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample140_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056533
sample_title: Sample140_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056534

Excluded

Sample141_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample141_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample141_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample141_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample141_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056534
sample_title: Sample141_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056535

Excluded

Sample142_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample142_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample142_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample142_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample142_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056535
sample_title: Sample142_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056536

Excluded

Sample143_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample143_Systemic JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample143_Systemic JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample143_Systemic JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample143_Systemic JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056536
sample_title: Sample143_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056537

Excluded

Sample144_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample144_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample144_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056537
sample_title: Sample144_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056538

Excluded

Sample145_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample145_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample145_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056538
sample_title: Sample145_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056539

Excluded

Sample146_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample146_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample146_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056539
sample_title: Sample146_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 15; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056540

Excluded

Sample147_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample147_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample147_Ulcerative Colitis Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056540
sample_title: Sample147_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056541

Excluded

Sample148_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample148_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample148_Crohn's Disease Whole Blood gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056541
sample_title: Sample148_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056542

Excluded

Sample149_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample149_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample149_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056542
sample_title: Sample149_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056543

Excluded

Sample150_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample150_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample150_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056543
sample_title: Sample150_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056544

Excluded

Sample151_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample151_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample151_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample151_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample151_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056544
sample_title: Sample151_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 7; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056545

Excluded

Sample152_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample152_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample152_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample152_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample152_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056545
sample_title: Sample152_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 8; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056546

Excluded

Sample153_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample153_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample153_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample153_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample153_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056546
sample_title: Sample153_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056547

Excluded

Sample154_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample154_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample154_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample154_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample154_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056547
sample_title: Sample154_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056548

Excluded

Sample155_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample155_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample155_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample155_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample155_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056548
sample_title: Sample155_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056549

Excluded

Sample156_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample156_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample156_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample156_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample156_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056549
sample_title: Sample156_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056550

Excluded

Sample157_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample157_Systemic JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample157_Systemic JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample157_Systemic JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample157_Systemic JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056550
sample_title: Sample157_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056551

Excluded

Sample158_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample158_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample158_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample158_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample158_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056551
sample_title: Sample158_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 8; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056552

Excluded

Sample159_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample159_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample159_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056552
sample_title: Sample159_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 16; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056553

Excluded

Sample160_Ulcerative Colitis

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample160_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample160_Ulcerative Colitis Whole Blood gender: Male; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056553
sample_title: Sample160_Ulcerative Colitis
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Ulcerative Colitis; tissue: Whole Blood

GSM3056554

Excluded

Sample161_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample161_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample161_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056554
sample_title: Sample161_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056555

Excluded

Sample162_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample162_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample162_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056555
sample_title: Sample162_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 17; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056556

Excluded

Sample163_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample163_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample163_Crohn's Disease Whole Blood gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056556
sample_title: Sample163_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: NA; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056557

Excluded

Sample164_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample164_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample164_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample164_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample164_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056557
sample_title: Sample164_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056558

Excluded

Sample165_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample165_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample165_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample165_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample165_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056558
sample_title: Sample165_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056559

Excluded

Sample166_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample166_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample166_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample166_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample166_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056559
sample_title: Sample166_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056560

Excluded

Sample167_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample167_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample167_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample167_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample167_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056560
sample_title: Sample167_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056561

Excluded

Sample168_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample168_Systemic JIA Whole Blood gender: Male; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample168_Systemic JIA Whole Blood gender: Male; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample168_Systemic JIA Whole Blood gender: Male; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample168_Systemic JIA Whole Blood gender: Male; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056561
sample_title: Sample168_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 2; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056562

Excluded

Sample169_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample169_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample169_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample169_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample169_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056562
sample_title: Sample169_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056563

Excluded

Sample170_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample170_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample170_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample170_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample170_Oligoarticular JIA Whole Blood gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056563
sample_title: Sample170_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056564

Excluded

Sample171_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample171_Systemic JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample171_Systemic JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample171_Systemic JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample171_Systemic JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056564
sample_title: Sample171_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056565

Excluded

Sample172_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample172_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample172_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample172_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample172_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056565
sample_title: Sample172_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056566

Excluded

Sample173_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample173_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample173_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample173_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample173_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056566
sample_title: Sample173_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 16; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056567

Excluded

Sample174_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample174_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 0; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample174_Crohn's Disease Whole Blood gender: Male; age at diagnosis: 0; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 0; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056567
sample_title: Sample174_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 0; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056568

Excluded

Sample175_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample175_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample175_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056568
sample_title: Sample175_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 10; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

GSM3056569

Excluded

Sample176_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample176_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample176_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056569
sample_title: Sample176_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056570

Excluded

Sample177_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample177_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample177_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056570
sample_title: Sample177_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056571

Excluded

Sample178_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample178_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample178_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056571
sample_title: Sample178_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056572

Excluded

Sample179_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample179_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample179_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056572
sample_title: Sample179_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056573

Excluded

Sample180_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample180_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample180_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056573
sample_title: Sample180_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056574

Excluded

Sample181_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample181_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample181_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056574
sample_title: Sample181_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056575

Excluded

Sample182_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample182_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample182_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056575
sample_title: Sample182_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056576

Excluded

Sample183_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample183_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample183_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056576
sample_title: Sample183_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056577

Excluded

Sample184_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample184_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample184_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056577
sample_title: Sample184_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056578

Excluded

Sample185_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample185_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample185_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056578
sample_title: Sample185_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056579

Excluded

Sample186_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample186_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample186_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056579
sample_title: Sample186_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056580

Excluded

Sample187_Control

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample187_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample187_Control Whole Blood gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056580
sample_title: Sample187_Control
source_name: Whole Blood
characteristics: gender: NA; age at diagnosis: NA; ancestry: NA; disease state (diagnosis): Control; tissue: Whole Blood

GSM3056581

Excluded

Sample188_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample188_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample188_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample188_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample188_Polyarticular JIA Whole Blood gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056581
sample_title: Sample188_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 4; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056582

Excluded

Sample189_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample189_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample189_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample189_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample189_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056582
sample_title: Sample189_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 7; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056583

Excluded

Sample190_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample190_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample190_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample190_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample190_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056583
sample_title: Sample190_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056584

Excluded

Sample191_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample191_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample191_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample191_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample191_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056584
sample_title: Sample191_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 13; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056585

Excluded

Sample192_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample192_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample192_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample192_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample192_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056585
sample_title: Sample192_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 6; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056586

Excluded

Sample193_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample193_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample193_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample193_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample193_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056586
sample_title: Sample193_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 5; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056587

Excluded

Sample194_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample194_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample194_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample194_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample194_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056587
sample_title: Sample194_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056588

Excluded

Sample195_Oligoarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample195_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample195_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample195_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample195_Oligoarticular JIA Whole Blood gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056588
sample_title: Sample195_Oligoarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 11; ancestry: White; disease state (diagnosis): Oligoarticular JIA; tissue: Whole Blood

GSM3056589

Excluded

Sample196_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample196_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample196_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample196_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample196_Systemic JIA Whole Blood gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056589
sample_title: Sample196_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 6; ancestry: Black; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056590

Excluded

Sample197_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample197_Systemic JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample197_Systemic JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample197_Systemic JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample197_Systemic JIA Whole Blood gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056590
sample_title: Sample197_Systemic JIA
source_name: Whole Blood
characteristics: gender: Male; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056591

Excluded

Sample198_Systemic JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample198_Systemic JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample198_Systemic JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample198_Systemic JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample198_Systemic JIA Whole Blood gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056591
sample_title: Sample198_Systemic JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 9; ancestry: White; disease state (diagnosis): Systemic JIA; tissue: Whole Blood

GSM3056592

Excluded

Sample199_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample199_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 15; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample199_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 15; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample199_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 15; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample199_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 15; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 15; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056592
sample_title: Sample199_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 15; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056593

Excluded

Sample200_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample200_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample200_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample200_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample200_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056593
sample_title: Sample200_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 5; ancestry: Black; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056594

Excluded

Sample201_Polyarticular JIA

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample201_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample201_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample201_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample201_Polyarticular JIA Whole Blood gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056594
sample_title: Sample201_Polyarticular JIA
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 13; ancestry: White; disease state (diagnosis): Polyarticular JIA; tissue: Whole Blood

GSM3056595

Excluded

Sample202_Crohn's Disease

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample202_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Sample202_Crohn's Disease Whole Blood gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Source metadata

Source name: Whole Blood
Characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3056595
sample_title: Sample202_Crohn's Disease
source_name: Whole Blood
characteristics: gender: Female; age at diagnosis: 14; ancestry: White; disease state (diagnosis): Crohn's Disease; tissue: Whole Blood

Included samples (0)

Uncertain samples (0)

Excluded samples (202)