GSE119600 matching samples

GSM3378086

Excluded

12/238_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/238_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/238_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/238_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/238_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378086
sample_title: 12/238_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378093

Excluded

12/295_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/295_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/295_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/295_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/295_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378093
sample_title: 12/295_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378095

Excluded

12/216_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/216_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/216_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/216_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/216_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378095
sample_title: 12/216_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378097

Excluded

12/147_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/147_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/147_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/147_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/147_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378097
sample_title: 12/147_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378099

Excluded

12/322_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/322_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/322_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/322_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/322_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378099
sample_title: 12/322_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378101

Excluded

12/75_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/75_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/75_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/75_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/75_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378101
sample_title: 12/75_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378103

Excluded

12/33_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/33_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/33_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/33_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/33_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378103
sample_title: 12/33_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378105

Excluded

12/297_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/297_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/297_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/297_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/297_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378105
sample_title: 12/297_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378107

Excluded

12/369_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/369_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/369_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/369_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/369_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378107
sample_title: 12/369_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378109

Excluded

12/55_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/55_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/55_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/55_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/55_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378109
sample_title: 12/55_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378111

Excluded

12//28_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//28_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//28_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//28_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//28_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378111
sample_title: 12//28_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378112

Excluded

12/299_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/299_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/299_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/299_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/299_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378112
sample_title: 12/299_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378115

Excluded

12/373_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/373_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/373_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/373_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/373_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378115
sample_title: 12/373_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378118

Excluded

12/374_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/374_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/374_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/374_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/374_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378118
sample_title: 12/374_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378120

Excluded

12/52_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/52_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/52_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/52_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/52_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378120
sample_title: 12/52_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378121

Excluded

12/303_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/303_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/303_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/303_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/303_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378121
sample_title: 12/303_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378124

Excluded

12/150_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/150_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/150_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/150_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/150_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378124
sample_title: 12/150_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378126

Excluded

12/251 _PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/251 _PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/251 _PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/251 _PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/251 _PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378126
sample_title: 12/251 _PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378128

Excluded

12/355_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/355_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/355_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/355_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/355_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378128
sample_title: 12/355_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378130

Excluded

12/356_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/356_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/356_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/356_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/356_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378130
sample_title: 12/356_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378132

Excluded

12/154_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/154_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/154_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/154_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/154_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378132
sample_title: 12/154_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378134

Excluded

12/347_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/347_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/347_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/347_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/347_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378134
sample_title: 12/347_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378136

Excluded

12//22_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//22_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//22_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//22_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//22_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378136
sample_title: 12//22_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378138

Excluded

12/293_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/293_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/293_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/293_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/293_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378138
sample_title: 12/293_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378140

Excluded

12/354_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/354_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/354_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/354_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/354_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378140
sample_title: 12/354_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378141

Excluded

12/339_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/339_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/339_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/339_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/339_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378141
sample_title: 12/339_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378143

Excluded

12/205_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/205_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/205_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/205_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/205_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378143
sample_title: 12/205_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378146

Excluded

12/281_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/281_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/281_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/281_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/281_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378146
sample_title: 12/281_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378148

Excluded

12/92_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/92_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/92_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/92_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/92_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378148
sample_title: 12/92_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378150

Excluded

12/234_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/234_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/234_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/234_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/234_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378150
sample_title: 12/234_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378152

Excluded

12/167_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/167_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/167_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/167_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/167_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378152
sample_title: 12/167_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378154

Excluded

10/12_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/12_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/12_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378154
sample_title: 10/12_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378156

Excluded

8/32_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/32_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/32_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378156
sample_title: 8/32_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378158

Excluded

11/11_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/11_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/11_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378158
sample_title: 11/11_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378160

Excluded

11/22_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/22_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/22_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378160
sample_title: 11/22_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378162

Excluded

8/14_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/14_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/14_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378162
sample_title: 8/14_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378164

Excluded

11/29_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/29_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/29_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378164
sample_title: 11/29_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378166

Excluded

12/228_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/228_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/228_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/228_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/228_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378166
sample_title: 12/228_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378167

Excluded

12/298_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/298_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/298_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/298_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/298_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378167
sample_title: 12/298_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378169

Excluded

8/42_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/42_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/42_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378169
sample_title: 8/42_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378171

Excluded

11/36_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/36_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/36_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378171
sample_title: 11/36_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378173

Excluded

8//11_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//11_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//11_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378173
sample_title: 8//11_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378175

Excluded

8//8_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//8_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//8_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378175
sample_title: 8//8_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378177

Excluded

11//15_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//15_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//15_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378177
sample_title: 11//15_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378179

Excluded

8//19_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//19_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//19_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378179
sample_title: 8//19_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378181

Excluded

12/178_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/178_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/178_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/178_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/178_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378181
sample_title: 12/178_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378183

Excluded

12/120_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/120_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/120_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/120_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/120_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378183
sample_title: 12/120_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378185

Excluded

2/5_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/5_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/5_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378185
sample_title: 2/5_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378187

Excluded

2/40_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/40_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/40_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378187
sample_title: 2/40_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378188

Excluded

2/48_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/48_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/48_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378188
sample_title: 2/48_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378189

Excluded

2/69_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/69_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/69_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378189
sample_title: 2/69_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378190

Excluded

2/94_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/94_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/94_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378190
sample_title: 2/94_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378191

Excluded

2/96_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/96_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/96_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378191
sample_title: 2/96_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378192

Excluded

2/112_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/112_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/112_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378192
sample_title: 2/112_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378193

Excluded

13//1_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//1_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//1_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378193
sample_title: 13//1_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378194

Excluded

13//5_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//5_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//5_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378194
sample_title: 13//5_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378195

Excluded

13//8_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//8_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//8_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378195
sample_title: 13//8_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378196

Excluded

13/25_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/25_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/25_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378196
sample_title: 13/25_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378197

Excluded

13/26_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/26_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/26_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378197
sample_title: 13/26_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378198

Excluded

13/31_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/31_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/31_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378198
sample_title: 13/31_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378199

Excluded

13/34_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/34_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/34_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378199
sample_title: 13/34_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378200

Excluded

13/40_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/40_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/40_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378200
sample_title: 13/40_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378201

Excluded

13/41_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/41_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/41_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378201
sample_title: 13/41_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378202

Excluded

13/52_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/52_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/52_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378202
sample_title: 13/52_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378203

Excluded

13/57_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/57_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/57_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378203
sample_title: 13/57_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378204

Excluded

13/64_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/64_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/64_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378204
sample_title: 13/64_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378205

Excluded

13/67_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/67_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/67_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378205
sample_title: 13/67_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378206

Excluded

13/69_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/69_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/69_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378206
sample_title: 13/69_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378207

Excluded

13/72_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/72_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/72_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378207
sample_title: 13/72_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378208

Excluded

13/74_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/74_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/74_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378208
sample_title: 13/74_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378209

Excluded

2/9_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/9_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/9_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378209
sample_title: 2/9_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378210

Excluded

2/33_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/33_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/33_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378210
sample_title: 2/33_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378211

Excluded

2/97_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/97_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/97_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378211
sample_title: 2/97_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378212

Excluded

2/106_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/106_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/106_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378212
sample_title: 2/106_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378213

Excluded

2/108_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/108_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/108_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378213
sample_title: 2/108_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378214

Excluded

2/133_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/133_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/133_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378214
sample_title: 2/133_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378215

Excluded

2/137_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/137_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/137_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378215
sample_title: 2/137_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378216

Excluded

2/2_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/2_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/2_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378216
sample_title: 2/2_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378217

Excluded

13//4_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//4_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//4_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378217
sample_title: 13//4_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378218

Excluded

13//6_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//6_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//6_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378218
sample_title: 13//6_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378219

Excluded

13//9_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//9_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13//9_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378219
sample_title: 13//9_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378220

Excluded

13/13_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/13_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/13_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378220
sample_title: 13/13_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378221

Excluded

13/14_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/14_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/14_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378221
sample_title: 13/14_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378222

Excluded

13/27_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/27_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/27_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378222
sample_title: 13/27_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378223

Excluded

13/28_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/28_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/28_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378223
sample_title: 13/28_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378224

Excluded

13/35_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/35_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/35_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378224
sample_title: 13/35_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378225

Excluded

13/36_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/36_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/36_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378225
sample_title: 13/36_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378226

Excluded

13/38_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/38_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/38_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378226
sample_title: 13/38_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378227

Excluded

13/39_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/39_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/39_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378227
sample_title: 13/39_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378228

Excluded

13/50_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/50_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/50_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378228
sample_title: 13/50_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378229

Excluded

13/65_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/65_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/65_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378229
sample_title: 13/65_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378230

Excluded

13/66_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/66_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/66_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378230
sample_title: 13/66_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378231

Excluded

13/103_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/103_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/103_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378231
sample_title: 13/103_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378232

Excluded

13/118_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/118_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/118_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378232
sample_title: 13/118_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378233

Excluded

5/36_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/36_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/36_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/36_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/36_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378233
sample_title: 5/36_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378234

Excluded

5//9_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378234
sample_title: 5//9_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378235

Excluded

5/32_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/32_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/32_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/32_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/32_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378235
sample_title: 5/32_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378236

Excluded

5//24_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378236
sample_title: 5//24_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378237

Excluded

5/38_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/38_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/38_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/38_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/38_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378237
sample_title: 5/38_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378238

Excluded

5/41_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/41_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/41_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/41_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/41_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378238
sample_title: 5/41_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378239

Excluded

5/37_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/37_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/37_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/37_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/37_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378239
sample_title: 5/37_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378240

Excluded

5//23_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//23_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//23_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//23_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//23_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378240
sample_title: 5//23_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378241

Excluded

2//26_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//26_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//26_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//26_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//26_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378241
sample_title: 2//26_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378242

Excluded

2//9_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378242
sample_title: 2//9_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378243

Excluded

2/47_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/47_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/47_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/47_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/47_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378243
sample_title: 2/47_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378244

Excluded

2/60_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/60_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/60_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/60_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/60_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378244
sample_title: 2/60_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378245

Excluded

2/45_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/45_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/45_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/45_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/45_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378245
sample_title: 2/45_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378246

Excluded

2//24_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378246
sample_title: 2//24_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378247

Excluded

2//4_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//4_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//4_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//4_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//4_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378247
sample_title: 2//4_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378248

Excluded

2//18_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//18_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//18_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//18_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//18_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378248
sample_title: 2//18_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378249

Excluded

12/377_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/377_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/377_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/377_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/377_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378249
sample_title: 12/377_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378250

Excluded

12/296_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/296_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/296_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/296_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/296_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378250
sample_title: 12/296_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378251

Excluded

12/379_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/379_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/379_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/379_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/379_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378251
sample_title: 12/379_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378252

Excluded

12/376_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/376_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/376_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/376_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/376_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378252
sample_title: 12/376_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378253

Excluded

12/315_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/315_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/315_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/315_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/315_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378253
sample_title: 12/315_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378254

Excluded

12/361_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/361_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/361_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/361_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/361_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378254
sample_title: 12/361_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378255

Excluded

12/213_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/213_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/213_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/213_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/213_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378255
sample_title: 12/213_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378256

Excluded

12/332_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/332_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/332_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/332_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/332_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378256
sample_title: 12/332_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378257

Excluded

12//18_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//18_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//18_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//18_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//18_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378257
sample_title: 12//18_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378258

Excluded

12/137_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/137_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/137_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/137_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/137_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378258
sample_title: 12/137_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378259

Excluded

12/218_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/218_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/218_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/218_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/218_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378259
sample_title: 12/218_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378260

Excluded

12//4_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//4_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//4_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//4_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//4_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378260
sample_title: 12//4_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378261

Excluded

12/336_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/336_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/336_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/336_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/336_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378261
sample_title: 12/336_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378262

Excluded

12/375_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/375_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/375_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/375_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/375_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378262
sample_title: 12/375_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378263

Excluded

11/33_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/33_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/33_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378263
sample_title: 11/33_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378264

Excluded

10//21_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 10//21_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 10//21_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378264
sample_title: 10//21_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378265

Excluded

8//15_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//15_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//15_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378265
sample_title: 8//15_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378266

Excluded

8//13_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//13_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//13_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378266
sample_title: 8//13_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378267

Excluded

11/38_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/38_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/38_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378267
sample_title: 11/38_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378268

Excluded

2//19_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//19_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//19_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//19_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//19_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378268
sample_title: 2//19_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378269

Excluded

2//10_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//10_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//10_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//10_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2//10_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378269
sample_title: 2//10_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378270

Excluded

10/36_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/36_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/36_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378270
sample_title: 10/36_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378271

Excluded

11/37_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/37_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/37_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378271
sample_title: 11/37_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378272

Excluded

11//26_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//26_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//26_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378272
sample_title: 11//26_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378273

Excluded

11//27_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//27_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//27_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378273
sample_title: 11//27_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378274

Excluded

11//16_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//16_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//16_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378274
sample_title: 11//16_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378275

Excluded

11//30_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//30_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//30_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378275
sample_title: 11//30_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378276

Excluded

8/68_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/68_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/68_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/68_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/68_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378276
sample_title: 8/68_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378277

Excluded

8/55_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/55_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/55_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/55_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/55_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378277
sample_title: 8/55_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378278

Excluded

2/116_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/116_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/116_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378278
sample_title: 2/116_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378279

Excluded

2/29_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/29_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/29_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378279
sample_title: 2/29_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378280

Excluded

2/31_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/31_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/31_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378280
sample_title: 2/31_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378281

Excluded

2/32_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/32_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/32_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378281
sample_title: 2/32_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378282

Excluded

2/45_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/45_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/45_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378282
sample_title: 2/45_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378283

Excluded

2/44_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/44_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/44_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378283
sample_title: 2/44_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378284

Excluded

2/46_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/46_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/46_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378284
sample_title: 2/46_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378285

Excluded

2/47_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/47_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/47_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378285
sample_title: 2/47_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378286

Excluded

13/76_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/76_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/76_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378286
sample_title: 13/76_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378287

Excluded

13/78_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/78_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/78_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378287
sample_title: 13/78_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378288

Excluded

13/79_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/79_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/79_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378288
sample_title: 13/79_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378289

Excluded

13/80_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/80_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/80_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378289
sample_title: 13/80_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378290

Excluded

13/82_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/82_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/82_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378290
sample_title: 13/82_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378291

Excluded

13/84_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/84_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/84_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378291
sample_title: 13/84_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378292

Excluded

13/86_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/86_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/86_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378292
sample_title: 13/86_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378293

Excluded

13/87_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/87_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/87_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378293
sample_title: 13/87_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378294

Excluded

13/88_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/88_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/88_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378294
sample_title: 13/88_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378295

Excluded

13/89_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/89_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/89_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378295
sample_title: 13/89_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378296

Excluded

13/90_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/90_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/90_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378296
sample_title: 13/90_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378297

Excluded

13/91_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/91_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/91_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378297
sample_title: 13/91_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378298

Excluded

13/96_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/96_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/96_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378298
sample_title: 13/96_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378299

Excluded

13/99_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/99_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/99_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378299
sample_title: 13/99_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378300

Excluded

13/101_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/101_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/101_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378300
sample_title: 13/101_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378301

Excluded

13/110_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/110_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/110_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378301
sample_title: 13/110_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378302

Excluded

2/121_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/121_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/121_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378302
sample_title: 2/121_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378303

Excluded

2/119_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/119_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/119_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378303
sample_title: 2/119_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378304

Excluded

2/136_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/136_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/136_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378304
sample_title: 2/136_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378305

Excluded

2/65_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/65_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/65_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378305
sample_title: 2/65_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378306

Excluded

5//18_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//18_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//18_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378306
sample_title: 5//18_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378307

Excluded

5//22_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//22_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//22_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378307
sample_title: 5//22_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378308

Excluded

5//23_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//23_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//23_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378308
sample_title: 5//23_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378309

Excluded

5//2_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//2_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5//2_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378309
sample_title: 5//2_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378310

Excluded

18/103_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/103_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/103_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378310
sample_title: 18/103_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378311

Excluded

18/106_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/106_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/106_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378311
sample_title: 18/106_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378312

Excluded

18/114_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/114_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/114_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378312
sample_title: 18/114_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378313

Excluded

18/120_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/120_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/120_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378313
sample_title: 18/120_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378314

Excluded

18/124_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/124_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/124_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378314
sample_title: 18/124_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378315

Excluded

18/125_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/125_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/125_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378315
sample_title: 18/125_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378316

Excluded

18/127_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/127_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/127_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378316
sample_title: 18/127_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378317

Excluded

18/128_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/128_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/128_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378317
sample_title: 18/128_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378318

Excluded

18/129_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/129_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/129_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378318
sample_title: 18/129_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378319

Excluded

18/135_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/135_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/135_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378319
sample_title: 18/135_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378320

Excluded

18/137_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/137_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/137_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378320
sample_title: 18/137_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378321

Excluded

18/138_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/138_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/138_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378321
sample_title: 18/138_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378322

Excluded

18/139_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/139_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/139_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378322
sample_title: 18/139_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378323

Excluded

8//16_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//16_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//16_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//16_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//16_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378323
sample_title: 8//16_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378324

Excluded

8//28_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//28_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//28_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//28_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//28_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378324
sample_title: 8//28_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378325

Excluded

8/35_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/35_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/35_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/35_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/35_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378325
sample_title: 8/35_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378326

Excluded

8/58_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/58_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/58_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/58_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/58_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378326
sample_title: 8/58_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378327

Excluded

8//31_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//31_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//31_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//31_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//31_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378327
sample_title: 8//31_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378328

Excluded

8/53_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/53_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/53_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/53_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/53_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378328
sample_title: 8/53_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378329

Excluded

8/50_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/50_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/50_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/50_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/50_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378329
sample_title: 8/50_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378330

Excluded

8/64_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/64_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/64_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/64_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/64_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378330
sample_title: 8/64_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378331

Excluded

8/62_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/62_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/62_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/62_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/62_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378331
sample_title: 8/62_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378332

Excluded

8//8_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//8_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//8_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//8_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//8_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378332
sample_title: 8//8_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378333

Excluded

8//30_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//30_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//30_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//30_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//30_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378333
sample_title: 8//30_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378334

Excluded

8//12_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//12_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//12_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//12_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//12_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378334
sample_title: 8//12_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378335

Excluded

8//25_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//25_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//25_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//25_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//25_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378335
sample_title: 8//25_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378336

Excluded

8/40_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/40_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/40_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/40_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/40_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378336
sample_title: 8/40_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378337

Excluded

8//29_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//29_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//29_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//29_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//29_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378337
sample_title: 8//29_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378338

Excluded

12/34_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/34_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/34_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/34_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/34_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378338
sample_title: 12/34_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378339

Excluded

12/382_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/382_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/382_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/382_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/382_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378339
sample_title: 12/382_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378340

Excluded

12/45_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/45_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/45_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/45_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/45_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378340
sample_title: 12/45_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378341

Excluded

12/383_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/383_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/383_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/383_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/383_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378341
sample_title: 12/383_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378342

Excluded

12/316_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/316_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/316_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/316_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/316_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378342
sample_title: 12/316_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378343

Excluded

12/192_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/192_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/192_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/192_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/192_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378343
sample_title: 12/192_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378344

Excluded

12//360_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//360_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//360_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//360_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//360_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378344
sample_title: 12//360_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378345

Excluded

12/223_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/223_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/223_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/223_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/223_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378345
sample_title: 12/223_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378346

Excluded

12/168_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/168_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/168_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/168_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/168_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378346
sample_title: 12/168_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378347

Excluded

12/224_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/224_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/224_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/224_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/224_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378347
sample_title: 12/224_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378348

Excluded

12/317_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/317_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/317_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/317_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/317_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378348
sample_title: 12/317_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378349

Excluded

12/349_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/349_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/349_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/349_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/349_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378349
sample_title: 12/349_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378350

Excluded

12/91_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/91_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/91_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/91_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/91_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378350
sample_title: 12/91_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378351

Excluded

12/381_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/381_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/381_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/381_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/381_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378351
sample_title: 12/381_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378352

Excluded

12/396_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/396_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/396_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/396_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/396_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378352
sample_title: 12/396_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378353

Excluded

12/170_PSC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/170_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/170_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/170_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/170_PSC Primary sclerosing cholangitis, adult condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary sclerosing cholangitis, adult
Characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378353
sample_title: 12/170_PSC
source_name: Primary sclerosing cholangitis, adult
characteristics: condition: primary sclerosing cholangitis; age group: adult; tissue: whole blood

GSM3378354

Excluded

8/36_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/36_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/36_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378354
sample_title: 8/36_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378355

Excluded

8//28_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//28_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//28_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378355
sample_title: 8//28_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378356

Excluded

8//9_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//9_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//9_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378356
sample_title: 8//9_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378357

Excluded

10/48_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/48_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/48_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378357
sample_title: 10/48_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378358

Excluded

11//2_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//2_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//2_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378358
sample_title: 11//2_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378359

Excluded

11/32_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/32_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/32_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378359
sample_title: 11/32_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378360

Excluded

8/54_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/54_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/54_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/54_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/54_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378360
sample_title: 8/54_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378361

Excluded

8/48_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/48_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/48_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/48_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/48_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378361
sample_title: 8/48_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378362

Excluded

11/40_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/40_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/40_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378362
sample_title: 11/40_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378363

Excluded

11//14_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//14_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//14_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378363
sample_title: 11//14_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378364

Excluded

8//21_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//21_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//21_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378364
sample_title: 8//21_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378365

Excluded

11//28_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//28_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//28_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378365
sample_title: 11//28_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378366

Excluded

10/38_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/38_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/38_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378366
sample_title: 10/38_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378367

Excluded

11/34_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/34_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11/34_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378367
sample_title: 11/34_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378368

Excluded

12/282_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/282_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/282_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/282_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/282_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378368
sample_title: 12/282_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378369

Excluded

12/244_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/244_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/244_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/244_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/244_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378369
sample_title: 12/244_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378370

Excluded

2/59_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/59_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/59_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378370
sample_title: 2/59_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378371

Excluded

2/55_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/55_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/55_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378371
sample_title: 2/55_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378372

Excluded

2/87_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/87_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/87_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378372
sample_title: 2/87_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378373

Excluded

2/91_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/91_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/91_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378373
sample_title: 2/91_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378374

Excluded

2/110_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/110_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/110_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378374
sample_title: 2/110_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378375

Excluded

2/53_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/53_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/53_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378375
sample_title: 2/53_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378376

Excluded

2/109_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/109_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/109_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378376
sample_title: 2/109_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378377

Excluded

2/54_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/54_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 2/54_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378377
sample_title: 2/54_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378378

Excluded

1/113_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/113_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/113_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378378
sample_title: 1/113_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378379

Excluded

1/195_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/195_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/195_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378379
sample_title: 1/195_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378380

Excluded

1/147_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/147_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/147_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378380
sample_title: 1/147_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378381

Excluded

13/131_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/131_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/131_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378381
sample_title: 13/131_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378382

Excluded

1/152_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/152_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/152_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378382
sample_title: 1/152_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378383

Excluded

1/173_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/173_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/173_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378383
sample_title: 1/173_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378384

Excluded

1/199_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/199_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/199_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378384
sample_title: 1/199_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378385

Excluded

1/100_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/100_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/100_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378385
sample_title: 1/100_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378386

Excluded

13/113_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/113_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/113_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378386
sample_title: 13/113_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378387

Excluded

13/119_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/119_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/119_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378387
sample_title: 13/119_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378388

Excluded

13/124_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/124_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/124_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378388
sample_title: 13/124_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378389

Excluded

1/197_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/197_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/197_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378389
sample_title: 1/197_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378390

Excluded

13/133_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/133_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/133_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378390
sample_title: 13/133_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378391

Excluded

13/134_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/134_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/134_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378391
sample_title: 13/134_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378392

Excluded

13/135_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/135_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/135_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378392
sample_title: 13/135_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378393

Excluded

13/141_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/141_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/141_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378393
sample_title: 13/141_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378394

Excluded

15/69_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/69_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/69_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378394
sample_title: 15/69_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378395

Excluded

15/67_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/67_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/67_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378395
sample_title: 15/67_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378396

Excluded

5/35_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/35_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 5/35_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378396
sample_title: 5/35_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378397

Excluded

15/71_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/71_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/71_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378397
sample_title: 15/71_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378398

Excluded

15/74_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/74_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/74_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378398
sample_title: 15/74_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378399

Excluded

15/64_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/64_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/64_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378399
sample_title: 15/64_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378400

Excluded

15/51_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/51_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 15/51_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378400
sample_title: 15/51_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378401

Excluded

15//12_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 15//12_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 15//12_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378401
sample_title: 15//12_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378402

Excluded

1/131_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/131_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/131_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378402
sample_title: 1/131_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378403

Excluded

1/86_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/86_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/86_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378403
sample_title: 1/86_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378404

Excluded

1/136_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/136_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/136_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378404
sample_title: 1/136_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378405

Excluded

1/145_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/145_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/145_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378405
sample_title: 1/145_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378406

Excluded

1/200_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/200_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/200_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378406
sample_title: 1/200_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378407

Excluded

1/88_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/88_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/88_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378407
sample_title: 1/88_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378408

Excluded

1/166_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/166_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/166_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378408
sample_title: 1/166_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378409

Excluded

1/167_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/167_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/167_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378409
sample_title: 1/167_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378410

Excluded

18/140_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/140_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/140_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378410
sample_title: 18/140_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378411

Excluded

18/141_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/141_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/141_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378411
sample_title: 18/141_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378412

Excluded

18/146_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/146_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/146_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378412
sample_title: 18/146_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378413

Excluded

18/148_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/148_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/148_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378413
sample_title: 18/148_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378414

Excluded

18/168_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/168_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/168_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378414
sample_title: 18/168_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378415

Excluded

18/183_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/183_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/183_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378415
sample_title: 18/183_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378416

Excluded

18/185_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/185_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/185_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378416
sample_title: 18/185_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378417

Excluded

18/197_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/197_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/197_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378417
sample_title: 18/197_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378418

Excluded

12/240_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/240_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/240_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/240_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/240_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378418
sample_title: 12/240_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378419

Excluded

12/121_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/121_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/121_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/121_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/121_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378419
sample_title: 12/121_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378420

Excluded

12/195_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/195_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/195_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/195_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/195_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378420
sample_title: 12/195_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378421

Excluded

12//27_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//27_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//27_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//27_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//27_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378421
sample_title: 12//27_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378422

Excluded

12//30_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//30_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//30_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//30_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12//30_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378422
sample_title: 12//30_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378423

Excluded

12/73_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/73_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/73_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/73_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/73_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378423
sample_title: 12/73_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378424

Excluded

12/177_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/177_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/177_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/177_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/177_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378424
sample_title: 12/177_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378425

Excluded

12/129_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/129_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/129_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/129_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/129_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378425
sample_title: 12/129_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378426

Excluded

12/309_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/309_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/309_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/309_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/309_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378426
sample_title: 12/309_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378427

Excluded

12/294_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/294_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/294_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/294_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/294_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378427
sample_title: 12/294_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378428

Excluded

12/221_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/221_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/221_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/221_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/221_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378428
sample_title: 12/221_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378429

Excluded

12/359_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/359_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/359_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/359_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/359_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378429
sample_title: 12/359_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378430

Excluded

12/97_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/97_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/97_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/97_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/97_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378430
sample_title: 12/97_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378431

Excluded

12/125_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/125_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/125_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/125_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/125_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378431
sample_title: 12/125_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378432

Excluded

12/126_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/126_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/126_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/126_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/126_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378432
sample_title: 12/126_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378433

Excluded

12/66_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/66_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/66_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/66_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/66_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378433
sample_title: 12/66_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378434

Excluded

12/243_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/243_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/243_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/243_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/243_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378434
sample_title: 12/243_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378435

Excluded

12/94_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/94_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/94_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/94_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/94_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378435
sample_title: 12/94_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378436

Excluded

12/104_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/104_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/104_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/104_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 12/104_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378436
sample_title: 12/104_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378437

Excluded

8/80_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/80_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/80_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/80_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/80_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378437
sample_title: 8/80_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378438

Excluded

8//5_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//5_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//5_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//5_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//5_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378438
sample_title: 8//5_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378439

Excluded

8//9_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//9_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378439
sample_title: 8//9_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378440

Excluded

8//27_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//27_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//27_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//27_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//27_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378440
sample_title: 8//27_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378441

Excluded

8//6_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//6_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//6_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//6_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//6_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378441
sample_title: 8//6_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378442

Excluded

8//24_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//24_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378442
sample_title: 8//24_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378443

Excluded

8/72_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/72_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/72_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/72_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/72_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378443
sample_title: 8/72_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378444

Excluded

8/66_PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/66_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/66_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/66_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/66_PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378444
sample_title: 8/66_PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378445

Excluded

10/51_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/51_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/51_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378445
sample_title: 10/51_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378446

Excluded

8//17_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//17_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//17_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378446
sample_title: 8//17_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378447

Excluded

11//4_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//4_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//4_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378447
sample_title: 11//4_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378448

Excluded

11//24_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//24_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//24_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378448
sample_title: 11//24_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378449

Excluded

10//17_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 10//17_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 10//17_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378449
sample_title: 10//17_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378450

Excluded

8/44_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/44_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/44_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378450
sample_title: 8/44_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378451

Excluded

8/42 PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/42 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/42 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/42 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/42 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378451
sample_title: 8/42 PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378452

Excluded

8/44 PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/44 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/44 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/44 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/44 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378452
sample_title: 8/44 PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378453

Excluded

8//22_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//22_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//22_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378453
sample_title: 8//22_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378454

Excluded

11//31_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//31_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 11//31_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378454
sample_title: 11//31_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378455

Excluded

10/57_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/57_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 10/57_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378455
sample_title: 10/57_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378456

Excluded

8/33_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/33_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/33_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378456
sample_title: 8/33_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378457

Excluded

8/43_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/43_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/43_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378457
sample_title: 8/43_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378458

Excluded

8//6_K

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//6_K Control, adult condition: control; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8//6_K Control, adult condition: control; age group: adult; tissue: whole blood

Source metadata

Source name: Control, adult
Characteristics: condition: control; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378458
sample_title: 8//6_K
source_name: Control, adult
characteristics: condition: control; age group: adult; tissue: whole blood

GSM3378459

Excluded

8/52 PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/52 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/52 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/52 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/52 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378459
sample_title: 8/52 PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378460

Excluded

8/57 PBC

Excluded: at least one selected requirement is not met. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Does not meet requirement. Case: specimen category excludes: Biofluid — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Does not meet requirement. Control: specimen category excludes: Biofluid — Does not meet requirement. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/57 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/57 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/57 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 8/57 PBC Primary biliary cholangitis, adult condition: primary biliary cholangitis; age group: adult; tissue: whole blood

Source metadata

Source name: Primary biliary cholangitis, adult
Characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378460
sample_title: 8/57 PBC
source_name: Primary biliary cholangitis, adult
characteristics: condition: primary biliary cholangitis; age group: adult; tissue: whole blood

GSM3378461

Excluded

1/151_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/151_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/151_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378461
sample_title: 1/151_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378462

Excluded

1/172_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/172_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/172_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378462
sample_title: 1/172_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378463

Excluded

1/180_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/180_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/180_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378463
sample_title: 1/180_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378464

Excluded

1/206_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/206_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/206_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378464
sample_title: 1/206_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378465

Excluded

1/153_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/153_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/153_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378465
sample_title: 1/153_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378466

Excluded

1/139_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/139_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/139_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378466
sample_title: 1/139_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378467

Excluded

1/129_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/129_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/129_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378467
sample_title: 1/129_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378468

Excluded

1/202_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/202_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/202_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378468
sample_title: 1/202_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378469

Excluded

1/171_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/171_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/171_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378469
sample_title: 1/171_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378470

Excluded

1/191_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/191_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/191_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378470
sample_title: 1/191_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378471

Excluded

1/159_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/159_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/159_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378471
sample_title: 1/159_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378472

Excluded

1/205_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/205_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/205_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378472
sample_title: 1/205_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378473

Excluded

1/156_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/156_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/156_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378473
sample_title: 1/156_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378474

Excluded

1/175_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/175_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/175_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378474
sample_title: 1/175_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378475

Excluded

1/201_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/201_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/201_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378475
sample_title: 1/201_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378476

Excluded

1/189_CY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/189_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/189_CY Crohn’s disease, child condition: Crohn's disease; age group: child; tissue: whole blood

Source metadata

Source name: Crohn’s disease, child
Characteristics: condition: Crohn's disease; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378476
sample_title: 1/189_CY
source_name: Crohn’s disease, child
characteristics: condition: Crohn's disease; age group: child; tissue: whole blood

GSM3378477

Excluded

13/149_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/149_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/149_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378477
sample_title: 13/149_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378478

Excluded

13/145_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/145_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/145_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378478
sample_title: 13/145_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378479

Excluded

13/144_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/144_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 13/144_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378479
sample_title: 13/144_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378480

Excluded

18/94_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/94_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/94_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378480
sample_title: 18/94_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378481

Excluded

18/99_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/99_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/99_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378481
sample_title: 18/99_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378482

Excluded

18/105_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/105_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/105_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378482
sample_title: 18/105_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378483

Excluded

18/119_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/119_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/119_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378483
sample_title: 18/119_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378484

Excluded

18/36_CA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/36_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/36_CA Crohn’s disease, adult condition: Crohn's disease; age group: adult; tissue: whole blood

Source metadata

Source name: Crohn’s disease, adult
Characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378484
sample_title: 18/36_CA
source_name: Crohn’s disease, adult
characteristics: condition: Crohn's disease; age group: adult; tissue: whole blood

GSM3378485

Excluded

1/75_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/75_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/75_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378485
sample_title: 1/75_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378486

Excluded

1/154_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/154_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/154_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378486
sample_title: 1/154_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378487

Excluded

1/165_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/165_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/165_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378487
sample_title: 1/165_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378488

Excluded

1/164_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/164_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/164_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378488
sample_title: 1/164_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378489

Excluded

1/211_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/211_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/211_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378489
sample_title: 1/211_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378490

Excluded

1/212_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/212_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/212_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378490
sample_title: 1/212_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378491

Excluded

1/93_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/93_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/93_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378491
sample_title: 1/93_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378492

Excluded

1/213_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/213_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/213_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378492
sample_title: 1/213_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378493

Excluded

1/162_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/162_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/162_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378493
sample_title: 1/162_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378494

Excluded

1/170_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/170_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/170_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378494
sample_title: 1/170_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378495

Excluded

1/132_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/132_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/132_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378495
sample_title: 1/132_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378496

Excluded

1/143_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/143_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/143_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378496
sample_title: 1/143_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378497

Excluded

1/158_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/158_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/158_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378497
sample_title: 1/158_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378498

Excluded

1/174_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/174_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/174_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378498
sample_title: 1/174_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378499

Excluded

1/94_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/94_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/94_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378499
sample_title: 1/94_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378500

Excluded

1/210_WY

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/210_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/210_WY Ulcerative colitis, child condition: ulcerative colitis; age group: child; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, child
Characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378500
sample_title: 1/210_WY
source_name: Ulcerative colitis, child
characteristics: condition: ulcerative colitis; age group: child; tissue: whole blood

GSM3378501

Excluded

18/206_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/206_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/206_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378501
sample_title: 18/206_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378502

Excluded

18/89_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/89_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/89_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378502
sample_title: 18/89_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378503

Excluded

18/93_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/93_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/93_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378503
sample_title: 18/93_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378504

Excluded

18/85_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/85_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 18/85_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378504
sample_title: 18/85_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378505

Excluded

14/37_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 14/37_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 14/37_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378505
sample_title: 14/37_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378506

Excluded

14/25_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 14/25_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 14/25_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378506
sample_title: 14/25_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378507

Excluded

14/29_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 14/29_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 14/29_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378507
sample_title: 14/29_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

GSM3378508

Excluded

1/133_WA

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/133_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- 1/133_WA Ulcerative colitis, adult condition: ulcerative colitis; age group: adult; tissue: whole blood

Source metadata

Source name: Ulcerative colitis, adult
Characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM3378508
sample_title: 1/133_WA
source_name: Ulcerative colitis, adult
characteristics: condition: ulcerative colitis; age group: adult; tissue: whole blood

Included samples (0)

Uncertain samples (0)

Excluded samples (370)