Matching samples

GSE128813 · The transcriptome analysis of regulatory networks in RA-FLSs

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (0)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

No uncertain samples.

Excluded samples (6)

GSM3685848

Excluded

LJR

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
          • Supported by the indexed evidence.
          • The reported value differs from the selected requirement.
          • LJR Fibroblast-like synoviocytes of rheumatoid arthritis subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line
        • specimen category excludes: Biofluid — Meets requirement
          • Supported by the indexed evidence.
          Source metadata
          Source name
          Fibroblast-like synoviocytes of rheumatoid arthritis
          Characteristics
          subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line
          Description
          Not reported
          Indexed organism evidence
          INFERRED · PARENT_INHERITED: Not reported
          Indexed assay evidence
          INFERRED · PARENT_INHERITED: Not reported
          Source
          GEO
          Original indexed metadata
          sample_accession: GSM3685848
sample_title: LJR
source_name: Fibroblast-like synoviocytes of rheumatoid arthritis
characteristics: subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line

          GSM3685849

          Excluded

          RA3

          Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Case marker detected.

          Requirements and decision evidence
          • organism: Homo sapiens — Insufficient evidence
            • The required value is not reported.
            • assay type: bulk RNA-seq — Insufficient evidence
              • The required value is not reported.
              • specimen category: Tissue or biopsy — Insufficient evidence
                • The required value is not reported.
                • excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
                  • Supported by the indexed evidence.
                  • The reported value differs from the selected requirement.
                  • RA3 Fibroblast-like synoviocytes of rheumatoid arthritis subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line
                • specimen category excludes: Biofluid — Meets requirement
                  • Supported by the indexed evidence.
                  Source metadata
                  Source name
                  Fibroblast-like synoviocytes of rheumatoid arthritis
                  Characteristics
                  subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line
                  Description
                  Not reported
                  Indexed organism evidence
                  INFERRED · PARENT_INHERITED: Not reported
                  Indexed assay evidence
                  INFERRED · PARENT_INHERITED: Not reported
                  Source
                  GEO
                  Original indexed metadata
                  sample_accession: GSM3685849
sample_title: RA3
source_name: Fibroblast-like synoviocytes of rheumatoid arthritis
characteristics: subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line

                  GSM3685850

                  Excluded

                  RA4

                  Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Case marker detected.

                  Requirements and decision evidence
                  • organism: Homo sapiens — Insufficient evidence
                    • The required value is not reported.
                    • assay type: bulk RNA-seq — Insufficient evidence
                      • The required value is not reported.
                      • specimen category: Tissue or biopsy — Insufficient evidence
                        • The required value is not reported.
                        • excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
                          • Supported by the indexed evidence.
                          • The reported value differs from the selected requirement.
                          • RA4 Fibroblast-like synoviocytes of rheumatoid arthritis subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line
                        • specimen category excludes: Biofluid — Meets requirement
                          • Supported by the indexed evidence.
                          Source metadata
                          Source name
                          Fibroblast-like synoviocytes of rheumatoid arthritis
                          Characteristics
                          subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM3685850
sample_title: RA4
source_name: Fibroblast-like synoviocytes of rheumatoid arthritis
characteristics: subject status: rheumatoid arthritis patient; cell type: human rheumatoid arthritis synoviocytes cell line

                          GSM3685851

                          Excluded

                          Normal1

                          Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Sample-local control marker detected.

                          Requirements and decision evidence
                          • organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • specimen category: Tissue or biopsy — Insufficient evidence
                                • The required value is not reported.
                                • excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
                                  • Supported by the indexed evidence.
                                  • The reported value differs from the selected requirement.
                                  • Normal1 Fibroblast-like synoviocytes of healthy control subject status: healthy control; cell type: human healthy control synoviocytes cell line
                                • specimen category excludes: Biofluid — Meets requirement
                                  • Supported by the indexed evidence.
                                  Source metadata
                                  Source name
                                  Fibroblast-like synoviocytes of healthy control
                                  Characteristics
                                  subject status: healthy control; cell type: human healthy control synoviocytes cell line
                                  Description
                                  Not reported
                                  Indexed organism evidence
                                  INFERRED · PARENT_INHERITED: Not reported
                                  Indexed assay evidence
                                  INFERRED · PARENT_INHERITED: Not reported
                                  Source
                                  GEO
                                  Original indexed metadata
                                  sample_accession: GSM3685851
sample_title: Normal1
source_name: Fibroblast-like synoviocytes of healthy control
characteristics: subject status: healthy control; cell type: human healthy control synoviocytes cell line

                                  GSM3685852

                                  Excluded

                                  Normal2

                                  Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Sample-local control marker detected.

                                  Requirements and decision evidence
                                  • organism: Homo sapiens — Insufficient evidence
                                    • The required value is not reported.
                                    • assay type: bulk RNA-seq — Insufficient evidence
                                      • The required value is not reported.
                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                        • The required value is not reported.
                                        • excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
                                          • Supported by the indexed evidence.
                                          • The reported value differs from the selected requirement.
                                          • Normal2 Fibroblast-like synoviocytes of healthy control subject status: healthy control; cell type: human healthy control synoviocytes cell line
                                        • specimen category excludes: Biofluid — Meets requirement
                                          • Supported by the indexed evidence.
                                          Source metadata
                                          Source name
                                          Fibroblast-like synoviocytes of healthy control
                                          Characteristics
                                          subject status: healthy control; cell type: human healthy control synoviocytes cell line
                                          Description
                                          Not reported
                                          Indexed organism evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Indexed assay evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Source
                                          GEO
                                          Original indexed metadata
                                          sample_accession: GSM3685852
sample_title: Normal2
source_name: Fibroblast-like synoviocytes of healthy control
characteristics: subject status: healthy control; cell type: human healthy control synoviocytes cell line

                                          GSM3685853

                                          Excluded

                                          Normal3

                                          Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Sample-local control marker detected.

                                          Requirements and decision evidence
                                          • organism: Homo sapiens — Insufficient evidence
                                            • The required value is not reported.
                                            • assay type: bulk RNA-seq — Insufficient evidence
                                              • The required value is not reported.
                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                • The required value is not reported.
                                                • excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
                                                  • Supported by the indexed evidence.
                                                  • The reported value differs from the selected requirement.
                                                  • Normal3 Fibroblast-like synoviocytes of healthy control subject status: healthy control; cell type: human healthy control synoviocytes cell line
                                                • specimen category excludes: Biofluid — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  Source metadata
                                                  Source name
                                                  Fibroblast-like synoviocytes of healthy control
                                                  Characteristics
                                                  subject status: healthy control; cell type: human healthy control synoviocytes cell line
                                                  Description
                                                  Not reported
                                                  Indexed organism evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Indexed assay evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Source
                                                  GEO
                                                  Original indexed metadata
                                                  sample_accession: GSM3685853
sample_title: Normal3
source_name: Fibroblast-like synoviocytes of healthy control
characteristics: subject status: healthy control; cell type: human healthy control synoviocytes cell line