S_ctrl_1
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_1 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_1 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289946
sample_title: S_ctrl_1
source_name: serum Evs
characteristics: disease: Healthy
S_ctrl_2
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_2 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_2 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289947
sample_title: S_ctrl_2
source_name: serum Evs
characteristics: disease: Healthy
S_ctrl_3
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_3 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_3 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289948
sample_title: S_ctrl_3
source_name: serum Evs
characteristics: disease: Healthy
S_ctrl_4
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_4 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_4 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289949
sample_title: S_ctrl_4
source_name: serum Evs
characteristics: disease: Healthy
S_ctrl_5
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_5 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_5 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289950
sample_title: S_ctrl_5
source_name: serum Evs
characteristics: disease: Healthy
S_ctrl_6
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_6 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_6 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289951
sample_title: S_ctrl_6
source_name: serum Evs
characteristics: disease: Healthy
S_ctrl_7
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_7 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_7 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289952
sample_title: S_ctrl_7
source_name: serum Evs
characteristics: disease: Healthy
S_ctrl_8
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_8 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_8 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289953
sample_title: S_ctrl_8
source_name: serum Evs
characteristics: disease: Healthy
S_ctrl_9
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_9 serum Evs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_ctrl_9 serum Evs disease: Healthy
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289954
sample_title: S_ctrl_9
source_name: serum Evs
characteristics: disease: Healthy
S_UC_10
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_10 serum Evs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_10 serum Evs disease: Ulcerative Colitis
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289955
sample_title: S_UC_10
source_name: serum Evs
characteristics: disease: Ulcerative Colitis
S_UC_11
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_11 serum Evs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_11 serum Evs disease: Ulcerative Colitis
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289956
sample_title: S_UC_11
source_name: serum Evs
characteristics: disease: Ulcerative Colitis
S_UC_12
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_12 serum Evs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_12 serum Evs disease: Ulcerative Colitis
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289957
sample_title: S_UC_12
source_name: serum Evs
characteristics: disease: Ulcerative Colitis
S_UC_13
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_13 serum Evs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_13 serum Evs disease: Ulcerative Colitis
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289958
sample_title: S_UC_13
source_name: serum Evs
characteristics: disease: Ulcerative Colitis
S_UC_14
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_14 serum Evs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_14 serum Evs disease: Ulcerative Colitis
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289959
sample_title: S_UC_14
source_name: serum Evs
characteristics: disease: Ulcerative Colitis
S_UC_15
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_15 serum Evs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_15 serum Evs disease: Ulcerative Colitis
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289960
sample_title: S_UC_15
source_name: serum Evs
characteristics: disease: Ulcerative Colitis
S_UC_17
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_17 serum Evs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_17 serum Evs disease: Ulcerative Colitis
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289961
sample_title: S_UC_17
source_name: serum Evs
characteristics: disease: Ulcerative Colitis
S_UC_18
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_18 serum Evs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_UC_18 serum Evs disease: Ulcerative Colitis
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289962
sample_title: S_UC_18
source_name: serum Evs
characteristics: disease: Ulcerative Colitis
S_CCA_19
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_19 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_19 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289963
sample_title: S_CCA_19
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_20
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_20 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_20 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289964
sample_title: S_CCA_20
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_21
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_21 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_21 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289965
sample_title: S_CCA_21
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_22
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_22 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_22 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289966
sample_title: S_CCA_22
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_23
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_23 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_23 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289967
sample_title: S_CCA_23
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_24
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_24 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_24 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289968
sample_title: S_CCA_24
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_25
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_25 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_25 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289969
sample_title: S_CCA_25
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_26
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_26 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_26 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289970
sample_title: S_CCA_26
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_27
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_27 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_27 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289971
sample_title: S_CCA_27
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_28
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_28 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_28 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289972
sample_title: S_CCA_28
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_29
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_29 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_29 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289973
sample_title: S_CCA_29
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
S_CCA_30
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_30 serum Evs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_CCA_30 serum Evs disease: Cholangiocarcinoma
Source metadata
- Source name
- serum Evs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289974
sample_title: S_CCA_30
source_name: serum Evs
characteristics: disease: Cholangiocarcinoma
OCtrl_31
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_31 Urine EVs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_31 Urine EVs disease: Healthy
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289975
sample_title: OCtrl_31
source_name: Urine EVs
characteristics: disease: Healthy
OCtrl_32
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_32 Urine EVs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_32 Urine EVs disease: Healthy
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289976
sample_title: OCtrl_32
source_name: Urine EVs
characteristics: disease: Healthy
OCtrl_33
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_33 Urine EVs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_33 Urine EVs disease: Healthy
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289977
sample_title: OCtrl_33
source_name: Urine EVs
characteristics: disease: Healthy
OCtrl_34
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_34 Urine EVs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_34 Urine EVs disease: Healthy
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289978
sample_title: OCtrl_34
source_name: Urine EVs
characteristics: disease: Healthy
OCtrl_35
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_35 Urine EVs disease: Healthy
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- OCtrl_35 Urine EVs disease: Healthy
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Healthy
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289979
sample_title: OCtrl_35
source_name: Urine EVs
characteristics: disease: Healthy
O_UC_36
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_36 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_36 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289980
sample_title: O_UC_36
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_38
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_38 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_38 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289981
sample_title: O_UC_38
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_39
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_39 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_39 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289982
sample_title: O_UC_39
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_40
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_40 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_40 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289983
sample_title: O_UC_40
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_41
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_41 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_41 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289984
sample_title: O_UC_41
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_42
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_42 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_42 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289985
sample_title: O_UC_42
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_43
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_43 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_43 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289986
sample_title: O_UC_43
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_44
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_44 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_44 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289987
sample_title: O_UC_44
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_45
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_45 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_45 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289988
sample_title: O_UC_45
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_PSC_46
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_46 Urine EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_46 Urine EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289989
sample_title: O_PSC_46
source_name: Urine EVs
characteristics: disease: Primary Sclerosing Cholangitis
O_PSC_48
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_48 Urine EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_48 Urine EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289990
sample_title: O_PSC_48
source_name: Urine EVs
characteristics: disease: Primary Sclerosing Cholangitis
O_PSC_49
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_49 Urine EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_49 Urine EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289991
sample_title: O_PSC_49
source_name: Urine EVs
characteristics: disease: Primary Sclerosing Cholangitis
O_PSC_50
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_50 Urine EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_50 Urine EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289992
sample_title: O_PSC_50
source_name: Urine EVs
characteristics: disease: Primary Sclerosing Cholangitis
O_PSC_51
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_51 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_51 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289993
sample_title: O_PSC_51
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_PSC_52
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_52 Urine EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_PSC_52 Urine EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289994
sample_title: O_PSC_52
source_name: Urine EVs
characteristics: disease: Primary Sclerosing Cholangitis
O_CCA_51
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_51 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_51 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289995
sample_title: O_CCA_51
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_52
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_52 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_52 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289996
sample_title: O_CCA_52
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_55
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_55 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_55 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289997
sample_title: O_CCA_55
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_56
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_56 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_56 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289998
sample_title: O_CCA_56
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_57
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_57 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_57 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4289999
sample_title: O_CCA_57
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_58
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_58 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_58 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290000
sample_title: O_CCA_58
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_59
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_59 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_59 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290001
sample_title: O_CCA_59
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_60
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_60 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_60 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290002
sample_title: O_CCA_60
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_61
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_61 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_61 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290003
sample_title: O_CCA_61
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_63
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_63 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_63 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290004
sample_title: O_CCA_63
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_65
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_65 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_65 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290005
sample_title: O_CCA_65
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_66
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_66 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_66 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290006
sample_title: O_CCA_66
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_67
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_67 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_67 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290007
sample_title: O_CCA_67
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_69
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_69 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_69 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290008
sample_title: O_CCA_69
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_70
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_70 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_70 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290009
sample_title: O_CCA_70
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_71
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_71 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_71 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290010
sample_title: O_CCA_71
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_72
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_72 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_72 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290011
sample_title: O_CCA_72
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_73
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_73 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_73 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290012
sample_title: O_CCA_73
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_74
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_74 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_74 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290013
sample_title: O_CCA_74
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_75
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_75 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_75 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290014
sample_title: O_CCA_75
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_76
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_76 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_76 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290015
sample_title: O_CCA_76
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_77
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_77 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_77 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290016
sample_title: O_CCA_77
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
O_CCA_78
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_78 Urine EVs disease: Cholangiocarcinoma
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_CCA_78 Urine EVs disease: Cholangiocarcinoma
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Cholangiocarcinoma
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290017
sample_title: O_CCA_78
source_name: Urine EVs
characteristics: disease: Cholangiocarcinoma
S_PSC_79
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_79 Serum EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_79 Serum EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Serum EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290018
sample_title: S_PSC_79
source_name: Serum EVs
characteristics: disease: Primary Sclerosing Cholangitis
S_PSC_80
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_80 Serum EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_80 Serum EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Serum EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290019
sample_title: S_PSC_80
source_name: Serum EVs
characteristics: disease: Primary Sclerosing Cholangitis
S_PSC_81
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_81 Serum EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_81 Serum EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Serum EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290020
sample_title: S_PSC_81
source_name: Serum EVs
characteristics: disease: Primary Sclerosing Cholangitis
S_PSC_82
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_82 Serum EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_82 Serum EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Serum EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290021
sample_title: S_PSC_82
source_name: Serum EVs
characteristics: disease: Primary Sclerosing Cholangitis
S_PSC_84
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_84 Serum EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_84 Serum EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Serum EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290022
sample_title: S_PSC_84
source_name: Serum EVs
characteristics: disease: Primary Sclerosing Cholangitis
S_PSC_85
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_85 Serum EVs disease: Primary Sclerosing Cholangitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- S_PSC_85 Serum EVs disease: Primary Sclerosing Cholangitis
Source metadata
- Source name
- Serum EVs
- Characteristics
- disease: Primary Sclerosing Cholangitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290023
sample_title: S_PSC_85
source_name: Serum EVs
characteristics: disease: Primary Sclerosing Cholangitis
O_UC_87
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_87 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_87 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290024
sample_title: O_UC_87
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
O_UC_88
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_88 Urine EVs disease: Ulcerative Colitis
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- O_UC_88 Urine EVs disease: Ulcerative Colitis
Source metadata
- Source name
- Urine EVs
- Characteristics
- disease: Ulcerative Colitis
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290025
sample_title: O_UC_88
source_name: Urine EVs
characteristics: disease: Ulcerative Colitis
EV_NHC
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EV_NHC Cell line-derived Evs disease: Normal cholangiocyte; cell line: NHC
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EV_NHC Cell line-derived Evs disease: Normal cholangiocyte; cell line: NHC
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line-derived Evs
- Characteristics
- disease: Normal cholangiocyte; cell line: NHC
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290026
sample_title: EV_NHC
source_name: Cell line-derived Evs
characteristics: disease: Normal cholangiocyte; cell line: NHC
EV_H69
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EV_H69 Cell line-derived Evs disease: Immortalized cholangiocyte; cell line: H69
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EV_H69 Cell line-derived Evs disease: Immortalized cholangiocyte; cell line: H69
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line-derived Evs
- Characteristics
- disease: Immortalized cholangiocyte; cell line: H69
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290027
sample_title: EV_H69
source_name: Cell line-derived Evs
characteristics: disease: Immortalized cholangiocyte; cell line: H69
EV_EGI1
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EV_EGI1 Cell line-derived Evs disease: Tumor cholangiocyte; cell line: EGI1
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EV_EGI1 Cell line-derived Evs disease: Tumor cholangiocyte; cell line: EGI1
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line-derived Evs
- Characteristics
- disease: Tumor cholangiocyte; cell line: EGI1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290028
sample_title: EV_EGI1
source_name: Cell line-derived Evs
characteristics: disease: Tumor cholangiocyte; cell line: EGI1
EV_TFK1
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EV_TFK1 Cell line-derived Evs disease: Tumor cholangiocyte; cell line: TFK1
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EV_TFK1 Cell line-derived Evs disease: Tumor cholangiocyte; cell line: TFK1
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line-derived Evs
- Characteristics
- disease: Tumor cholangiocyte; cell line: TFK1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290029
sample_title: EV_TFK1
source_name: Cell line-derived Evs
characteristics: disease: Tumor cholangiocyte; cell line: TFK1
NHCWCE_1
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- NHCWCE_1 Cell line disease: Normal cholangiocyte; cell line: NHC
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- NHCWCE_1 Cell line disease: Normal cholangiocyte; cell line: NHC
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Normal cholangiocyte; cell line: NHC
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290030
sample_title: NHCWCE_1
source_name: Cell line
characteristics: disease: Normal cholangiocyte; cell line: NHC
NHCWCE_2
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- NHCWCE_2 Cell line disease: Normal cholangiocyte; cell line: NHC
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- NHCWCE_2 Cell line disease: Normal cholangiocyte; cell line: NHC
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Normal cholangiocyte; cell line: NHC
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290031
sample_title: NHCWCE_2
source_name: Cell line
characteristics: disease: Normal cholangiocyte; cell line: NHC
NHCWCE_3
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- NHCWCE_3 Cell line disease: Normal cholangiocyte; cell line: NHC
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- NHCWCE_3 Cell line disease: Normal cholangiocyte; cell line: NHC
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Normal cholangiocyte; cell line: NHC
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290032
sample_title: NHCWCE_3
source_name: Cell line
characteristics: disease: Normal cholangiocyte; cell line: NHC
H69WCE_1
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- H69WCE_1 Cell line disease: Immortalized cholangiocyte; cell line: H69
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- H69WCE_1 Cell line disease: Immortalized cholangiocyte; cell line: H69
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Immortalized cholangiocyte; cell line: H69
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290033
sample_title: H69WCE_1
source_name: Cell line
characteristics: disease: Immortalized cholangiocyte; cell line: H69
H69WCE_2
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- H69WCE_2 Cell line disease: Immortalized cholangiocyte; cell line: H69
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- H69WCE_2 Cell line disease: Immortalized cholangiocyte; cell line: H69
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Immortalized cholangiocyte; cell line: H69
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290034
sample_title: H69WCE_2
source_name: Cell line
characteristics: disease: Immortalized cholangiocyte; cell line: H69
H69WCE_3
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- H69WCE_3 Cell line disease: Immortalized cholangiocyte; cell line: H69
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- H69WCE_3 Cell line disease: Immortalized cholangiocyte; cell line: H69
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Immortalized cholangiocyte; cell line: H69
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290035
sample_title: H69WCE_3
source_name: Cell line
characteristics: disease: Immortalized cholangiocyte; cell line: H69
EGIWCE_1
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EGIWCE_1 Cell line disease: Tumor cholangiocyte; cell line: EGI1
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EGIWCE_1 Cell line disease: Tumor cholangiocyte; cell line: EGI1
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Tumor cholangiocyte; cell line: EGI1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290036
sample_title: EGIWCE_1
source_name: Cell line
characteristics: disease: Tumor cholangiocyte; cell line: EGI1
EGIWCE_2
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EGIWCE_2 Cell line disease: Tumor cholangiocyte; cell line: EGI1
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EGIWCE_2 Cell line disease: Tumor cholangiocyte; cell line: EGI1
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Tumor cholangiocyte; cell line: EGI1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290037
sample_title: EGIWCE_2
source_name: Cell line
characteristics: disease: Tumor cholangiocyte; cell line: EGI1
EGIWCE_3
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EGIWCE_3 Cell line disease: Tumor cholangiocyte; cell line: EGI1
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- EGIWCE_3 Cell line disease: Tumor cholangiocyte; cell line: EGI1
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Tumor cholangiocyte; cell line: EGI1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290038
sample_title: EGIWCE_3
source_name: Cell line
characteristics: disease: Tumor cholangiocyte; cell line: EGI1
TFKWCE_1
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- TFKWCE_1 Cell line disease: Tumor cholangiocyte; cell line: TFK1
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- TFKWCE_1 Cell line disease: Tumor cholangiocyte; cell line: TFK1
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Tumor cholangiocyte; cell line: TFK1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290039
sample_title: TFKWCE_1
source_name: Cell line
characteristics: disease: Tumor cholangiocyte; cell line: TFK1
TFKWCE_2
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- TFKWCE_2 Cell line disease: Tumor cholangiocyte; cell line: TFK1
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- TFKWCE_2 Cell line disease: Tumor cholangiocyte; cell line: TFK1
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Tumor cholangiocyte; cell line: TFK1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290040
sample_title: TFKWCE_2
source_name: Cell line
characteristics: disease: Tumor cholangiocyte; cell line: TFK1
TFKWCE_3
Excluded by the study grouping rules. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement. Study role: Normalized exclusion flag detected: cell line.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- TFKWCE_3 Cell line disease: Tumor cholangiocyte; cell line: TFK1
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Does not meet requirement
- Supported by the indexed evidence.
- The reported value differs from the selected requirement.
- TFKWCE_3 Cell line disease: Tumor cholangiocyte; cell line: TFK1
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Cell line
- Characteristics
- disease: Tumor cholangiocyte; cell line: TFK1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM4290041
sample_title: TFKWCE_3
source_name: Cell line
characteristics: disease: Tumor cholangiocyte; cell line: TFK1