Matching samples

GSE157020 · TSG-6 supports fistulizing Crohn’s disease by a mechanoregulated activation of the epithelial-to-mesenchymal transition

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

30 case / 0 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (30)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM4750933

Uncertain

F2_CD.Fistule

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • F2_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
        • F2_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • specimen category excludes: Biofluid — Insufficient evidence
          • The required value is not reported.
          • F2_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
          • F2_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
        Source metadata
        Source name
        Ileum biopsy
        Characteristics
        tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
        Description
        Not reported
        Indexed organism evidence
        INFERRED · PARENT_INHERITED: Not reported
        Indexed assay evidence
        INFERRED · PARENT_INHERITED: Not reported
        Source
        GEO
        Original indexed metadata
        sample_accession: GSM4750933
sample_title: F2_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

        GSM4750934

        Uncertain

        F6_CD.Fistule

        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

        Requirements and decision evidence
        • organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • specimen category: Tissue or biopsy — Insufficient evidence
              • The required value is not reported.
              • F6_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
              • F6_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • specimen category excludes: Biofluid — Insufficient evidence
                • The required value is not reported.
                • F6_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                • F6_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
              Source metadata
              Source name
              Ileum biopsy
              Characteristics
              tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM4750934
sample_title: F6_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

              GSM4750935

              Uncertain

              F8_CD.Fistule

              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

              Requirements and decision evidence
              • organism: Homo sapiens — Insufficient evidence
                • The required value is not reported.
                • assay type: bulk RNA-seq — Insufficient evidence
                  • The required value is not reported.
                  • specimen category: Tissue or biopsy — Insufficient evidence
                    • The required value is not reported.
                    • F8_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                    • F8_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Insufficient evidence
                      • The required value is not reported.
                      • F8_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                      • F8_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                    Source metadata
                    Source name
                    Ileum biopsy
                    Characteristics
                    tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                    Description
                    Not reported
                    Indexed organism evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Indexed assay evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Source
                    GEO
                    Original indexed metadata
                    sample_accession: GSM4750935
sample_title: F8_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

                    GSM4750936

                    Uncertain

                    F10_CD.Fistule

                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                    Requirements and decision evidence
                    • organism: Homo sapiens — Insufficient evidence
                      • The required value is not reported.
                      • assay type: bulk RNA-seq — Insufficient evidence
                        • The required value is not reported.
                        • specimen category: Tissue or biopsy — Insufficient evidence
                          • The required value is not reported.
                          • F10_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                          • F10_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                          • Supported by the indexed evidence.
                          • specimen category excludes: Biofluid — Insufficient evidence
                            • The required value is not reported.
                            • F10_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                            • F10_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                          Source metadata
                          Source name
                          Ileum biopsy
                          Characteristics
                          tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM4750936
sample_title: F10_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

                          GSM4750937

                          Uncertain

                          F14_CD.Fistule

                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                          Requirements and decision evidence
                          • organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • specimen category: Tissue or biopsy — Insufficient evidence
                                • The required value is not reported.
                                • F14_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                • F14_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                • Supported by the indexed evidence.
                                • specimen category excludes: Biofluid — Insufficient evidence
                                  • The required value is not reported.
                                  • F14_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                  • F14_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                Source metadata
                                Source name
                                Ileum biopsy
                                Characteristics
                                tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM4750937
sample_title: F14_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

                                GSM4750938

                                Uncertain

                                F16_CD.Fistule

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • F16_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                      • F16_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                      • Supported by the indexed evidence.
                                      • specimen category excludes: Biofluid — Insufficient evidence
                                        • The required value is not reported.
                                        • F16_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                        • F16_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                      Source metadata
                                      Source name
                                      Ileum biopsy
                                      Characteristics
                                      tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                      Description
                                      Not reported
                                      Indexed organism evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Indexed assay evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Source
                                      GEO
                                      Original indexed metadata
                                      sample_accession: GSM4750938
sample_title: F16_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

                                      GSM4750939

                                      Uncertain

                                      F20_CD.Fistule

                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                      Requirements and decision evidence
                                      • organism: Homo sapiens — Insufficient evidence
                                        • The required value is not reported.
                                        • assay type: bulk RNA-seq — Insufficient evidence
                                          • The required value is not reported.
                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                            • The required value is not reported.
                                            • F20_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                            • F20_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                            • Supported by the indexed evidence.
                                            • specimen category excludes: Biofluid — Insufficient evidence
                                              • The required value is not reported.
                                              • F20_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                              • F20_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                            Source metadata
                                            Source name
                                            Ileum biopsy
                                            Characteristics
                                            tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                            Description
                                            Not reported
                                            Indexed organism evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Indexed assay evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Source
                                            GEO
                                            Original indexed metadata
                                            sample_accession: GSM4750939
sample_title: F20_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

                                            GSM4750940

                                            Uncertain

                                            F22_CD.Fistule

                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                            Requirements and decision evidence
                                            • organism: Homo sapiens — Insufficient evidence
                                              • The required value is not reported.
                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                • The required value is not reported.
                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                  • The required value is not reported.
                                                  • F22_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                  • F22_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                    • The required value is not reported.
                                                    • F22_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                    • F22_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                  Source metadata
                                                  Source name
                                                  Ileum biopsy
                                                  Characteristics
                                                  tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                  Description
                                                  Not reported
                                                  Indexed organism evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Indexed assay evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Source
                                                  GEO
                                                  Original indexed metadata
                                                  sample_accession: GSM4750940
sample_title: F22_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

                                                  GSM4750941

                                                  Uncertain

                                                  F26_CD.Fistule

                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                  Requirements and decision evidence
                                                  • organism: Homo sapiens — Insufficient evidence
                                                    • The required value is not reported.
                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                      • The required value is not reported.
                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                        • The required value is not reported.
                                                        • F26_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                        • F26_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                        • Supported by the indexed evidence.
                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                          • The required value is not reported.
                                                          • F26_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                          • F26_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                        Source metadata
                                                        Source name
                                                        Ileum biopsy
                                                        Characteristics
                                                        tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule
                                                        Description
                                                        Not reported
                                                        Indexed organism evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Indexed assay evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Source
                                                        GEO
                                                        Original indexed metadata
                                                        sample_accession: GSM4750941
sample_title: F26_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with fistule

                                                        GSM4750942

                                                        Uncertain

                                                        PF2_CD.Perifistule

                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                        Requirements and decision evidence
                                                        • organism: Homo sapiens — Insufficient evidence
                                                          • The required value is not reported.
                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                            • The required value is not reported.
                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                              • The required value is not reported.
                                                              • PF2_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                              • PF2_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                • The required value is not reported.
                                                                • PF2_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                • PF2_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                              Source metadata
                                                              Source name
                                                              Ileum biopsy
                                                              Characteristics
                                                              tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM4750942
sample_title: PF2_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                              GSM4750943

                                                              Uncertain

                                                              PF6_CD.Perifistule

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • PF6_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                    • PF6_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                    • Supported by the indexed evidence.
                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • PF6_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                      • PF6_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                    Source metadata
                                                                    Source name
                                                                    Ileum biopsy
                                                                    Characteristics
                                                                    tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                    Description
                                                                    Not reported
                                                                    Indexed organism evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Indexed assay evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Source
                                                                    GEO
                                                                    Original indexed metadata
                                                                    sample_accession: GSM4750943
sample_title: PF6_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                                    GSM4750944

                                                                    Uncertain

                                                                    PF7_CD.Perifistule

                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                    Requirements and decision evidence
                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                        • The required value is not reported.
                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • PF7_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                          • PF7_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                          • Supported by the indexed evidence.
                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • PF7_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                            • PF7_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                          Source metadata
                                                                          Source name
                                                                          Ileum biopsy
                                                                          Characteristics
                                                                          tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                          Description
                                                                          Not reported
                                                                          Indexed organism evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Indexed assay evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Source
                                                                          GEO
                                                                          Original indexed metadata
                                                                          sample_accession: GSM4750944
sample_title: PF7_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                                          GSM4750945

                                                                          Uncertain

                                                                          PF8_CD.Perifistule

                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                          Requirements and decision evidence
                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                • The required value is not reported.
                                                                                • PF8_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                • PF8_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • PF8_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                  • PF8_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                Source metadata
                                                                                Source name
                                                                                Ileum biopsy
                                                                                Characteristics
                                                                                tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                Description
                                                                                Not reported
                                                                                Indexed organism evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Indexed assay evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Source
                                                                                GEO
                                                                                Original indexed metadata
                                                                                sample_accession: GSM4750945
sample_title: PF8_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                                                GSM4750946

                                                                                Uncertain

                                                                                PF10_CD.Perifistule

                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                Requirements and decision evidence
                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • PF10_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                      • PF10_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                      • Supported by the indexed evidence.
                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • PF10_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                        • PF10_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                      Source metadata
                                                                                      Source name
                                                                                      Ileum biopsy
                                                                                      Characteristics
                                                                                      tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                      Description
                                                                                      Not reported
                                                                                      Indexed organism evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Indexed assay evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Source
                                                                                      GEO
                                                                                      Original indexed metadata
                                                                                      sample_accession: GSM4750946
sample_title: PF10_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                                                      GSM4750947

                                                                                      Uncertain

                                                                                      PF16_CD.Perifistule

                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                      Requirements and decision evidence
                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                          • The required value is not reported.
                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                            • The required value is not reported.
                                                                                            • PF16_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                            • PF16_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • PF16_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                              • PF16_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                            Source metadata
                                                                                            Source name
                                                                                            Ileum biopsy
                                                                                            Characteristics
                                                                                            tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM4750947
sample_title: PF16_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                                                            GSM4750948

                                                                                            Uncertain

                                                                                            PF20_CD.Perifistule

                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • PF20_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                  • PF20_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                  • Supported by the indexed evidence.
                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • PF20_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                    • PF20_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                  Source metadata
                                                                                                  Source name
                                                                                                  Ileum biopsy
                                                                                                  Characteristics
                                                                                                  tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                  Description
                                                                                                  Not reported
                                                                                                  Indexed organism evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Indexed assay evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Source
                                                                                                  GEO
                                                                                                  Original indexed metadata
                                                                                                  sample_accession: GSM4750948
sample_title: PF20_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                                                                  GSM4750949

                                                                                                  Uncertain

                                                                                                  PF22_CD.Perifistule

                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                  Requirements and decision evidence
                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                      • The required value is not reported.
                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • PF22_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                        • PF22_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                        • Supported by the indexed evidence.
                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • PF22_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                          • PF22_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                        Source metadata
                                                                                                        Source name
                                                                                                        Ileum biopsy
                                                                                                        Characteristics
                                                                                                        tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                        Description
                                                                                                        Not reported
                                                                                                        Indexed organism evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Indexed assay evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Source
                                                                                                        GEO
                                                                                                        Original indexed metadata
                                                                                                        sample_accession: GSM4750949
sample_title: PF22_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                                                                        GSM4750950

                                                                                                        Uncertain

                                                                                                        PF26_CD.Perifistule

                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                        Requirements and decision evidence
                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                              • The required value is not reported.
                                                                                                              • PF26_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                              • PF26_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • PF26_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                                • PF26_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                              Source metadata
                                                                                                              Source name
                                                                                                              Ileum biopsy
                                                                                                              Characteristics
                                                                                                              tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule
                                                                                                              Description
                                                                                                              Not reported
                                                                                                              Indexed organism evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Indexed assay evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Source
                                                                                                              GEO
                                                                                                              Original indexed metadata
                                                                                                              sample_accession: GSM4750950
sample_title: PF26_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Crohn's disease with perifistule

                                                                                                              GSM4750951

                                                                                                              Uncertain

                                                                                                              F28_Non_CD.Fistule

                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                              Requirements and decision evidence
                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • F28_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                    • F28_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                    • Supported by the indexed evidence.
                                                                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • F28_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                      • F28_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                    Source metadata
                                                                                                                    Source name
                                                                                                                    Ileum biopsy
                                                                                                                    Characteristics
                                                                                                                    tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                    Description
                                                                                                                    Not reported
                                                                                                                    Indexed organism evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Indexed assay evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Source
                                                                                                                    GEO
                                                                                                                    Original indexed metadata
                                                                                                                    sample_accession: GSM4750951
sample_title: F28_Non_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule

                                                                                                                    GSM4750952

                                                                                                                    Uncertain

                                                                                                                    F11_Non_CD.Fistule

                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                    Requirements and decision evidence
                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                        • The required value is not reported.
                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                          • The required value is not reported.
                                                                                                                          • F11_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                          • F11_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • F11_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                            • F11_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                          Source metadata
                                                                                                                          Source name
                                                                                                                          Ileum biopsy
                                                                                                                          Characteristics
                                                                                                                          tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                          Description
                                                                                                                          Not reported
                                                                                                                          Indexed organism evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Indexed assay evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Source
                                                                                                                          GEO
                                                                                                                          Original indexed metadata
                                                                                                                          sample_accession: GSM4750952
sample_title: F11_Non_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule

                                                                                                                          GSM4750953

                                                                                                                          Uncertain

                                                                                                                          F13_Non_CD.Fistule

                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                          Requirements and decision evidence
                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                              • The required value is not reported.
                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                • The required value is not reported.
                                                                                                                                • F13_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                • F13_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                  • The required value is not reported.
                                                                                                                                  • F13_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                  • F13_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                Source metadata
                                                                                                                                Source name
                                                                                                                                Ileum biopsy
                                                                                                                                Characteristics
                                                                                                                                tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                Description
                                                                                                                                Not reported
                                                                                                                                Indexed organism evidence
                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                Indexed assay evidence
                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                Source
                                                                                                                                GEO
                                                                                                                                Original indexed metadata
                                                                                                                                sample_accession: GSM4750953
sample_title: F13_Non_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule

                                                                                                                                GSM4750954

                                                                                                                                Uncertain

                                                                                                                                F17_Non_CD.Fistule

                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                Requirements and decision evidence
                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                  • The required value is not reported.
                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                    • The required value is not reported.
                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                      • The required value is not reported.
                                                                                                                                      • F17_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                      • F17_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • F17_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                        • F17_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                      Source metadata
                                                                                                                                      Source name
                                                                                                                                      Ileum biopsy
                                                                                                                                      Characteristics
                                                                                                                                      tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                      Description
                                                                                                                                      Not reported
                                                                                                                                      Indexed organism evidence
                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                      Indexed assay evidence
                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                      Source
                                                                                                                                      GEO
                                                                                                                                      Original indexed metadata
                                                                                                                                      sample_accession: GSM4750954
sample_title: F17_Non_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule

                                                                                                                                      GSM4750955

                                                                                                                                      Uncertain

                                                                                                                                      F18_Non_CD.Fistule

                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                      Requirements and decision evidence
                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                          • The required value is not reported.
                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                            • The required value is not reported.
                                                                                                                                            • F18_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                            • F18_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                              • The required value is not reported.
                                                                                                                                              • F18_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                              • F18_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                            Source metadata
                                                                                                                                            Source name
                                                                                                                                            Ileum biopsy
                                                                                                                                            Characteristics
                                                                                                                                            tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                            Description
                                                                                                                                            Not reported
                                                                                                                                            Indexed organism evidence
                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                            Indexed assay evidence
                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                            Source
                                                                                                                                            GEO
                                                                                                                                            Original indexed metadata
                                                                                                                                            sample_accession: GSM4750955
sample_title: F18_Non_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule

                                                                                                                                            GSM4750956

                                                                                                                                            Uncertain

                                                                                                                                            F21_Non_CD.Fistule

                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                            Requirements and decision evidence
                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                              • The required value is not reported.
                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                • The required value is not reported.
                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                  • The required value is not reported.
                                                                                                                                                  • F21_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                                  • F21_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • F21_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                                    • F21_Non_CD.Fistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                                  Source metadata
                                                                                                                                                  Source name
                                                                                                                                                  Ileum biopsy
                                                                                                                                                  Characteristics
                                                                                                                                                  tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule
                                                                                                                                                  Description
                                                                                                                                                  Not reported
                                                                                                                                                  Indexed organism evidence
                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                  Indexed assay evidence
                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                  Source
                                                                                                                                                  GEO
                                                                                                                                                  Original indexed metadata
                                                                                                                                                  sample_accession: GSM4750956
sample_title: F21_Non_CD.Fistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with fistule

                                                                                                                                                  GSM4750957

                                                                                                                                                  Uncertain

                                                                                                                                                  PF28_Non_CD.Perifistule

                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                      • The required value is not reported.
                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                        • The required value is not reported.
                                                                                                                                                        • PF28_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                        • PF28_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • PF28_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                          • PF28_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                        Source metadata
                                                                                                                                                        Source name
                                                                                                                                                        Ileum biopsy
                                                                                                                                                        Characteristics
                                                                                                                                                        tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                        Description
                                                                                                                                                        Not reported
                                                                                                                                                        Indexed organism evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Indexed assay evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Source
                                                                                                                                                        GEO
                                                                                                                                                        Original indexed metadata
                                                                                                                                                        sample_accession: GSM4750957
sample_title: PF28_Non_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule

                                                                                                                                                        GSM4750958

                                                                                                                                                        Uncertain

                                                                                                                                                        PF11_Non_CD.Perifistule

                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                            • The required value is not reported.
                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                              • The required value is not reported.
                                                                                                                                                              • PF11_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                              • PF11_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                • PF11_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                • PF11_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                              Source metadata
                                                                                                                                                              Source name
                                                                                                                                                              Ileum biopsy
                                                                                                                                                              Characteristics
                                                                                                                                                              tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                              Description
                                                                                                                                                              Not reported
                                                                                                                                                              Indexed organism evidence
                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                              Indexed assay evidence
                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                              Source
                                                                                                                                                              GEO
                                                                                                                                                              Original indexed metadata
                                                                                                                                                              sample_accession: GSM4750958
sample_title: PF11_Non_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule

                                                                                                                                                              GSM4750959

                                                                                                                                                              Uncertain

                                                                                                                                                              PF13_Non_CD.Perifistule

                                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                              Requirements and decision evidence
                                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                    • PF13_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                    • PF13_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • PF13_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                      • PF13_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                    Source metadata
                                                                                                                                                                    Source name
                                                                                                                                                                    Ileum biopsy
                                                                                                                                                                    Characteristics
                                                                                                                                                                    tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                    Description
                                                                                                                                                                    Not reported
                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                    Source
                                                                                                                                                                    GEO
                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                    sample_accession: GSM4750959
sample_title: PF13_Non_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule

                                                                                                                                                                    GSM4750960

                                                                                                                                                                    Uncertain

                                                                                                                                                                    PF17_Non_CD.Perifistule

                                                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                    Requirements and decision evidence
                                                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                          • PF17_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                          • PF17_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                            • PF17_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                            • PF17_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                          Source metadata
                                                                                                                                                                          Source name
                                                                                                                                                                          Ileum biopsy
                                                                                                                                                                          Characteristics
                                                                                                                                                                          tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                          Description
                                                                                                                                                                          Not reported
                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                          Source
                                                                                                                                                                          GEO
                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                          sample_accession: GSM4750960
sample_title: PF17_Non_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule

                                                                                                                                                                          GSM4750961

                                                                                                                                                                          Uncertain

                                                                                                                                                                          PF18_Non_CD.Perifistule

                                                                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                          Requirements and decision evidence
                                                                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                • PF18_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                • PF18_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • PF18_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                  • PF18_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                Source metadata
                                                                                                                                                                                Source name
                                                                                                                                                                                Ileum biopsy
                                                                                                                                                                                Characteristics
                                                                                                                                                                                tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                Description
                                                                                                                                                                                Not reported
                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                Source
                                                                                                                                                                                GEO
                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                sample_accession: GSM4750961
sample_title: PF18_Non_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule

                                                                                                                                                                                GSM4750962

                                                                                                                                                                                Uncertain

                                                                                                                                                                                PF21_Non_CD.Perifistule

                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                      • PF21_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                      • PF21_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                        • PF21_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                        • PF21_Non_CD.Perifistule Ileum biopsy tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                      Source metadata
                                                                                                                                                                                      Source name
                                                                                                                                                                                      Ileum biopsy
                                                                                                                                                                                      Characteristics
                                                                                                                                                                                      tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule
                                                                                                                                                                                      Description
                                                                                                                                                                                      Not reported
                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Source
                                                                                                                                                                                      GEO
                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                      sample_accession: GSM4750962
sample_title: PF21_Non_CD.Perifistule
source_name: Ileum biopsy
characteristics: tissue: Ileum biopsy; diagnosis: Non-Crohn's disease with perifistule

                                                                                                                                                                                      Excluded samples (0)

                                                                                                                                                                                      No excluded samples.