Matching samples

GSE15933 · Analysis of Gene Expression changes in human intestinal endothelial-to-mesenchymal transition - UNTREATED/CONTROL GROUP

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

0 case / 4 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (4)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM399760

Uncertain

HIMEC normal 1 unstimulated 12h

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Treatment control marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
          • Supported by the indexed evidence.
          • specimen category excludes: Biofluid — Meets requirement
            • Supported by the indexed evidence.
            Source metadata
            Source name
            human intestinal microvascular endothelial cells, control patient 1, unstimulated, 12 hours
            Characteristics
            tissue: Intestinal mucosa; gender: Male; age: 56 yrs; disease state: normal
            Description
            Not reported
            Indexed organism evidence
            INFERRED · PARENT_INHERITED: Not reported
            Indexed assay evidence
            INFERRED · PARENT_INHERITED: Not reported
            Source
            GEO
            Original indexed metadata
            sample_accession: GSM399760
sample_title: HIMEC normal 1 unstimulated 12h
source_name: human intestinal microvascular endothelial cells, control patient 1, unstimulated, 12 hours
characteristics: tissue: Intestinal mucosa; gender: Male; age: 56 yrs; disease state: normal

            GSM399764

            Uncertain

            HIMEC ulcerative colitis unstimulated 12h

            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Treatment control marker detected.

            Requirements and decision evidence
            • organism: Homo sapiens — Insufficient evidence
              • The required value is not reported.
              • assay type: bulk RNA-seq — Insufficient evidence
                • The required value is not reported.
                • specimen category: Tissue or biopsy — Insufficient evidence
                  • The required value is not reported.
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Meets requirement
                      • Supported by the indexed evidence.
                      Source metadata
                      Source name
                      human intestinal microvascular endothelial cells, ulcerative colitis patient, unstimulated, 12 hours
                      Characteristics
                      tissue: Intestinal mucosa; gender: Female; age: 34 yrs; disease state: ulcerative colitis
                      Description
                      Not reported
                      Indexed organism evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Indexed assay evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Source
                      GEO
                      Original indexed metadata
                      sample_accession: GSM399764
sample_title: HIMEC ulcerative colitis unstimulated 12h
source_name: human intestinal microvascular endothelial cells, ulcerative colitis patient, unstimulated, 12 hours
characteristics: tissue: Intestinal mucosa; gender: Female; age: 34 yrs; disease state: ulcerative colitis

                      GSM399767

                      Uncertain

                      HIMEC Crohn's disease unstimulated 12h

                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Treatment control marker detected.

                      Requirements and decision evidence
                      • organism: Homo sapiens — Insufficient evidence
                        • The required value is not reported.
                        • assay type: bulk RNA-seq — Insufficient evidence
                          • The required value is not reported.
                          • specimen category: Tissue or biopsy — Insufficient evidence
                            • The required value is not reported.
                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                              • Supported by the indexed evidence.
                              • specimen category excludes: Biofluid — Meets requirement
                                • Supported by the indexed evidence.
                                Source metadata
                                Source name
                                human intestinal microvascular endothelial cells, crohn’s disease patient, unstimulated, 12 hours
                                Characteristics
                                tissue: Intestinal mucosa; gender: Male; age: 37 yrs; disease state: Crohn's disease
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM399767
sample_title: HIMEC Crohn's disease unstimulated 12h
source_name: human intestinal microvascular endothelial cells, crohn’s disease patient, unstimulated, 12 hours
characteristics: tissue: Intestinal mucosa; gender: Male; age: 37 yrs; disease state: Crohn's disease

                                GSM399768

                                Uncertain

                                HIMEC normal 2 unstimulated 12h

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Treatment control marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                        • Supported by the indexed evidence.
                                        • specimen category excludes: Biofluid — Meets requirement
                                          • Supported by the indexed evidence.
                                          Source metadata
                                          Source name
                                          human intestinal microvascular endothelial cells, control patient 2, unstimulated, 12 hours
                                          Characteristics
                                          tissue: Intestinal mucosa; gender: Male; age: 48 yrs; disease state: normal
                                          Description
                                          Not reported
                                          Indexed organism evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Indexed assay evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Source
                                          GEO
                                          Original indexed metadata
                                          sample_accession: GSM399768
sample_title: HIMEC normal 2 unstimulated 12h
source_name: human intestinal microvascular endothelial cells, control patient 2, unstimulated, 12 hours
characteristics: tissue: Intestinal mucosa; gender: Male; age: 48 yrs; disease state: normal

                                          Excluded samples (0)

                                          No excluded samples.