These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.
CO1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CO1 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO1 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CO1 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO1 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
Source metadata
- Source name
- Colonic mucosal biopsy from control individual
- Characteristics
- tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364627
sample_title: CO1
source_name: Colonic mucosal biopsy from control individual
characteristics: tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
CO2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CO2 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO2 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CO2 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO2 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
Source metadata
- Source name
- Colonic mucosal biopsy from control individual
- Characteristics
- tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364628
sample_title: CO2
source_name: Colonic mucosal biopsy from control individual
characteristics: tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
CO3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CO3 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO3 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CO3 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO3 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
Source metadata
- Source name
- Colonic mucosal biopsy from control individual
- Characteristics
- tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364629
sample_title: CO3
source_name: Colonic mucosal biopsy from control individual
characteristics: tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
CO4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CO4 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO4 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CO4 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO4 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
Source metadata
- Source name
- Colonic mucosal biopsy from control individual
- Characteristics
- tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364630
sample_title: CO4
source_name: Colonic mucosal biopsy from control individual
characteristics: tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
CO5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CO5 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO5 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CO5 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO5 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
Source metadata
- Source name
- Colonic mucosal biopsy from control individual
- Characteristics
- tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364631
sample_title: CO5
source_name: Colonic mucosal biopsy from control individual
characteristics: tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
CO6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CO6 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO6 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CO6 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
- CO6 Colonic mucosal biopsy from control individual tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not appli...
Source metadata
- Source name
- Colonic mucosal biopsy from control individual
- Characteristics
- tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364632
sample_title: CO6
source_name: Colonic mucosal biopsy from control individual
characteristics: tissue: Colon; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
UCR1_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR1_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR1_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR1_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR1_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364633
sample_title: UCR1_beforeT
source_name: Colonic mucosal biopsy from UC responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
UCR2_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR2_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR2_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR2_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR2_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364634
sample_title: UCR2_beforeT
source_name: Colonic mucosal biopsy from UC responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
UCR3_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR3_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR3_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR3_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR3_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364635
sample_title: UCR3_beforeT
source_name: Colonic mucosal biopsy from UC responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
UCR4_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR4_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR4_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR4_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR4_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364636
sample_title: UCR4_beforeT
source_name: Colonic mucosal biopsy from UC responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
UCR5_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR5_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR5_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR5_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR5_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364637
sample_title: UCR5_beforeT
source_name: Colonic mucosal biopsy from UC responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
UCR6_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR6_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR6_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR6_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR6_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364638
sample_title: UCR6_beforeT
source_name: Colonic mucosal biopsy from UC responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
UCR7_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR7_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR7_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR7_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR7_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364639
sample_title: UCR7_beforeT
source_name: Colonic mucosal biopsy from UC responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
UCR8_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR8_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR8_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR8_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
- UCR8_beforeT Colonic mucosal biopsy from UC responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364640
sample_title: UCR8_beforeT
source_name: Colonic mucosal biopsy from UC responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
UCNR1_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR1_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR1_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR1_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR1_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364641
sample_title: UCNR1_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR2_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR2_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR2_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR2_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR2_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364642
sample_title: UCNR2_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR3_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR3_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR3_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR3_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR3_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364643
sample_title: UCNR3_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR4_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR4_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR4_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR4_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR4_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364644
sample_title: UCNR4_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR5_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR5_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR5_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR5_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR5_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364645
sample_title: UCNR5_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR6_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR6_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR6_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR6_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR6_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364646
sample_title: UCNR6_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR7_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR7_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR7_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR7_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR7_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364647
sample_title: UCNR7_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR8_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR8_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR8_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR8_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR8_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364648
sample_title: UCNR8_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR9_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR9_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR9_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR9_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
- UCNR9_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364649
sample_title: UCNR9_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR10_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR10_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR10_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR10_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR10_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364650
sample_title: UCNR10_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR11_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR11_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR11_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR11_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR11_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364651
sample_title: UCNR11_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR12_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR12_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR12_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR12_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR12_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364652
sample_title: UCNR12_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR13_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR13_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR13_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR13_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR13_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364653
sample_title: UCNR13_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR14_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR14_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR14_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR14_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR14_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364654
sample_title: UCNR14_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR15_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR15_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR15_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR15_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR15_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364655
sample_title: UCNR15_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCNR16_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR16_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR16_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR16_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
- UCNR16_beforeT Colonic mucosal biopsy from UC non-responder before first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first infli...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM364656
sample_title: UCNR16_beforeT
source_name: Colonic mucosal biopsy from UC non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
UCR1_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR1_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR1_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR1_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR1_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422963
sample_title: UCR1_afterT
source_name: Colonic mucosal biopsy from UC responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
UCR2_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR2_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR2_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR2_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR2_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422965
sample_title: UCR2_afterT
source_name: Colonic mucosal biopsy from UC responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
UCR3_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR3_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR3_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR3_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR3_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422967
sample_title: UCR3_afterT
source_name: Colonic mucosal biopsy from UC responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
UCR4_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR4_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR4_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR4_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR4_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422969
sample_title: UCR4_afterT
source_name: Colonic mucosal biopsy from UC responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
UCR5_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR5_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR5_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR5_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR5_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422971
sample_title: UCR5_afterT
source_name: Colonic mucosal biopsy from UC responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
UCR6_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR6_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR6_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR6_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR6_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422973
sample_title: UCR6_afterT
source_name: Colonic mucosal biopsy from UC responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
UCR7_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR7_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR7_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR7_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR7_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422975
sample_title: UCR7_afterT
source_name: Colonic mucosal biopsy from UC responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
UCR8_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCR8_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR8_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCR8_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
- UCR8_afterT Colonic mucosal biopsy from UC responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Colonic mucosal biopsy from UC responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422977
sample_title: UCR8_afterT
source_name: Colonic mucosal biopsy from UC responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
UCNR1_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR1_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR1_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR1_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR1_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422979
sample_title: UCNR1_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR2_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR2_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR2_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR2_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR2_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422981
sample_title: UCNR2_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR3_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR3_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR3_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR3_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR3_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422983
sample_title: UCNR3_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR4_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR4_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR4_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR4_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR4_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422985
sample_title: UCNR4_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR5_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR5_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR5_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR5_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR5_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422987
sample_title: UCNR5_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR6_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR6_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR6_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR6_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR6_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422989
sample_title: UCNR6_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR7_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR7_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR7_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR7_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR7_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422991
sample_title: UCNR7_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR8_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR8_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR8_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR8_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR8_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422993
sample_title: UCNR8_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR9_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR9_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR9_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR9_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
- UCNR9_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422995
sample_title: UCNR9_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR10_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR10_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR10_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR10_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR10_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422997
sample_title: UCNR10_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR11_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR11_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR11_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR11_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR11_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM422999
sample_title: UCNR11_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR12_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR12_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR12_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR12_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR12_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423001
sample_title: UCNR12_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR13_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR13_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR13_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR13_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR13_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423003
sample_title: UCNR13_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR14_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR14_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR14_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR14_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR14_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423005
sample_title: UCNR14_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR15_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR15_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR15_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR15_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR15_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423007
sample_title: UCNR15_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
UCNR16_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UCNR16_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR16_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UCNR16_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
- UCNR16_afterT Colonic mucosal biopsy from UC non-responder after first infliximab treatment tissue: Colon; disease: UC; response to infliximab: No; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from UC non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423009
sample_title: UCNR16_afterT
source_name: Colonic mucosal biopsy from UC non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: UC; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDcR1_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR1_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR1_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR1_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR1_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423010
sample_title: CDcR1_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR1_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR1_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR1_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR1_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR1_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423011
sample_title: CDcR1_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR2_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR2_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR2_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR2_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR2_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423012
sample_title: CDcR2_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR3_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR3_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR3_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR3_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR3_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423013
sample_title: CDcR3_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR3_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR3_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR3_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR3_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR3_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423014
sample_title: CDcR3_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR4_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR4_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR4_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR4_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR4_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423015
sample_title: CDcR4_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR4_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR4_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR4_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR4_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR4_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423016
sample_title: CDcR4_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR5_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR5_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR5_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR5_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR5_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423017
sample_title: CDcR5_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR5_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR5_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR5_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR5_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR5_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423018
sample_title: CDcR5_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR6_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR6_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR6_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR6_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR6_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423019
sample_title: CDcR6_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR6_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR6_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR6_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR6_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR6_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423020
sample_title: CDcR6_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR7_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR7_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR7_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR7_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR7_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423021
sample_title: CDcR7_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR7_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR7_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR7_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR7_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR7_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423022
sample_title: CDcR7_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR8_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR8_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR8_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR8_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR8_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423023
sample_title: CDcR8_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR8_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR8_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR8_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR8_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR8_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423024
sample_title: CDcR8_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR9_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR9_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR9_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR9_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
- CDcR9_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixim...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423025
sample_title: CDcR9_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR9_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR9_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR9_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR9_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDcR9_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423026
sample_title: CDcR9_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR10_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR10_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
- CDcR10_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR10_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
- CDcR10_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423027
sample_title: CDcR10_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR10_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR10_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
- CDcR10_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR10_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
- CDcR10_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423028
sample_title: CDcR10_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR11_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR11_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
- CDcR11_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR11_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
- CDcR11_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423029
sample_title: CDcR11_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR11_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR11_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
- CDcR11_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR11_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
- CDcR11_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423030
sample_title: CDcR11_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcR12_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR12_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
- CDcR12_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR12_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
- CDcR12_beforeT Colonic mucosal biopsy from CDc responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixi...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423031
sample_title: CDcR12_beforeT
source_name: Colonic mucosal biopsy from CDc responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDcR12_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcR12_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
- CDcR12_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcR12_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
- CDcR12_afterT Colonic mucosal biopsy from CDc responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: Yes; before or after first inflixima...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423032
sample_title: CDcR12_afterT
source_name: Colonic mucosal biopsy from CDc responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDcNR1_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR1_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR1_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR1_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR1_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423033
sample_title: CDcNR1_beforeT
source_name: Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDcNR1_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR1_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR1_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR1_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR1_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423034
sample_title: CDcNR1_afterT
source_name: Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDcNR2_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR2_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR2_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR2_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR2_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423035
sample_title: CDcNR2_beforeT
source_name: Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDcNR2_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR2_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR2_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR2_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR2_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423036
sample_title: CDcNR2_afterT
source_name: Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDcNR3_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR3_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR3_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR3_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR3_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423037
sample_title: CDcNR3_beforeT
source_name: Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDcNR3_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR3_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR3_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR3_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR3_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423038
sample_title: CDcNR3_afterT
source_name: Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDcNR4_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR4_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR4_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR4_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR4_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423039
sample_title: CDcNR4_beforeT
source_name: Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDcNR4_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR4_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR4_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR4_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR4_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423040
sample_title: CDcNR4_afterT
source_name: Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDcNR5_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR5_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR5_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR5_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR5_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423041
sample_title: CDcNR5_beforeT
source_name: Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDcNR5_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR5_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR5_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR5_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR5_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423042
sample_title: CDcNR5_afterT
source_name: Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDcNR6_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR6_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR6_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR6_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR6_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423043
sample_title: CDcNR6_beforeT
source_name: Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDcNR6_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR6_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR6_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR6_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR6_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423044
sample_title: CDcNR6_afterT
source_name: Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDcNR7_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR7_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR7_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR7_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
- CDcNR7_beforeT Colonic mucosal biopsy from CDc non-responder before first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first infl...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423045
sample_title: CDcNR7_beforeT
source_name: Colonic mucosal biopsy from CDc non-responder before first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDcNR7_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDcNR7_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR7_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDcNR7_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
- CDcNR7_afterT Colonic mucosal biopsy from CDc non-responder after first infliximab treatment tissue: Colon; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
- Characteristics
- tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423046
sample_title: CDcNR7_afterT
source_name: Colonic mucosal biopsy from CDc non-responder after first infliximab treatment
characteristics: tissue: Colon; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
IL1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IL1 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL1 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IL1 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL1 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
Source metadata
- Source name
- Ileal mucosal biopsy from control individual
- Characteristics
- tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423047
sample_title: IL1
source_name: Ileal mucosal biopsy from control individual
characteristics: tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
IL2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IL2 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL2 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IL2 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL2 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
Source metadata
- Source name
- Ileal mucosal biopsy from control individual
- Characteristics
- tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423048
sample_title: IL2
source_name: Ileal mucosal biopsy from control individual
characteristics: tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
IL3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IL3 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL3 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IL3 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL3 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
Source metadata
- Source name
- Ileal mucosal biopsy from control individual
- Characteristics
- tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423049
sample_title: IL3
source_name: Ileal mucosal biopsy from control individual
characteristics: tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
IL4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IL4 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL4 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IL4 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL4 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
Source metadata
- Source name
- Ileal mucosal biopsy from control individual
- Characteristics
- tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423050
sample_title: IL4
source_name: Ileal mucosal biopsy from control individual
characteristics: tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
IL5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IL5 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL5 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IL5 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL5 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
Source metadata
- Source name
- Ileal mucosal biopsy from control individual
- Characteristics
- tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423051
sample_title: IL5
source_name: Ileal mucosal biopsy from control individual
characteristics: tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
IL6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IL6 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL6 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IL6 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- IL6 Ileal mucosal biopsy from control individual tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
Source metadata
- Source name
- Ileal mucosal biopsy from control individual
- Characteristics
- tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423052
sample_title: IL6
source_name: Ileal mucosal biopsy from control individual
characteristics: tissue: Ileum; disease: Control; response to infliximab: Not applicable; before or after first infliximab treatment: Not applicable
CDiR1_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR1_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR1_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR1_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR1_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423053
sample_title: CDiR1_beforeT
source_name: Ileal mucosal biopsy from CDi responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDiR1_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR1_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR1_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR1_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR1_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423054
sample_title: CDiR1_afterT
source_name: Ileal mucosal biopsy from CDi responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDiR2_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR2_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR2_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR2_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR2_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423055
sample_title: CDiR2_beforeT
source_name: Ileal mucosal biopsy from CDi responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDiR2_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR2_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR2_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR2_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR2_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423056
sample_title: CDiR2_afterT
source_name: Ileal mucosal biopsy from CDi responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDiR3_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR3_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR3_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR3_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR3_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423057
sample_title: CDiR3_beforeT
source_name: Ileal mucosal biopsy from CDi responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDiR3_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR3_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR3_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR3_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR3_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423058
sample_title: CDiR3_afterT
source_name: Ileal mucosal biopsy from CDi responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDiR4_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR4_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR4_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR4_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR4_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423059
sample_title: CDiR4_beforeT
source_name: Ileal mucosal biopsy from CDi responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDiR4_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR4_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR4_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR4_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR4_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423060
sample_title: CDiR4_afterT
source_name: Ileal mucosal biopsy from CDi responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDiR5_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR5_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR5_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR5_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR5_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423061
sample_title: CDiR5_beforeT
source_name: Ileal mucosal biopsy from CDi responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDiR5_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR5_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR5_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR5_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR5_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423062
sample_title: CDiR5_afterT
source_name: Ileal mucosal biopsy from CDi responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDiR6_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR6_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR6_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR6_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR6_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423063
sample_title: CDiR6_beforeT
source_name: Ileal mucosal biopsy from CDi responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDiR6_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR6_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR6_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR6_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR6_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423064
sample_title: CDiR6_afterT
source_name: Ileal mucosal biopsy from CDi responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDiR7_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR7_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR7_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR7_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR7_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423065
sample_title: CDiR7_beforeT
source_name: Ileal mucosal biopsy from CDi responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDiR7_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR7_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR7_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR7_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR7_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423066
sample_title: CDiR7_afterT
source_name: Ileal mucosal biopsy from CDi responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDiR8_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR8_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR8_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR8_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
- CDiR8_beforeT Ileal mucosal biopsy from CDi responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423067
sample_title: CDiR8_beforeT
source_name: Ileal mucosal biopsy from CDi responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: Before first infliximab treatment
CDiR8_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiR8_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR8_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiR8_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
- CDiR8_afterT Ileal mucosal biopsy from CDi responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab t...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423068
sample_title: CDiR8_afterT
source_name: Ileal mucosal biopsy from CDi responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: Yes; before or after first infliximab treatment: After first infliximab treatment
CDiNR1_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR1_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR1_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR1_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR1_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423069
sample_title: CDiNR1_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR1_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR1_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR1_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR1_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR1_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423070
sample_title: CDiNR1_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR2_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR2_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR2_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR2_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR2_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423071
sample_title: CDiNR2_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR2_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR2_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR2_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR2_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR2_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423072
sample_title: CDiNR2_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR3_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR3_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR3_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR3_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR3_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423073
sample_title: CDiNR3_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR3_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR3_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR3_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR3_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR3_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423074
sample_title: CDiNR3_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR4_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR4_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR4_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR4_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR4_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423075
sample_title: CDiNR4_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR4_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR4_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR4_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR4_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR4_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423076
sample_title: CDiNR4_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR5_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR5_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR5_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR5_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR5_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423077
sample_title: CDiNR5_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR5_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR5_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR5_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR5_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR5_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423078
sample_title: CDiNR5_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR6_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR6_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR6_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR6_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR6_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423079
sample_title: CDiNR6_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR6_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR6_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR6_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR6_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR6_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423080
sample_title: CDiNR6_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR7_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR7_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR7_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR7_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR7_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423081
sample_title: CDiNR7_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR7_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR7_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR7_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR7_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR7_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423082
sample_title: CDiNR7_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR8_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR8_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR8_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR8_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR8_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423083
sample_title: CDiNR8_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR8_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR8_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR8_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR8_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR8_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423084
sample_title: CDiNR8_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR9_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR9_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR9_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR9_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
- CDiNR9_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflix...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423085
sample_title: CDiNR9_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR9_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR9_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR9_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR9_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
- CDiNR9_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixim...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423086
sample_title: CDiNR9_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
CDiNR10_beforeT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR10_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first infli...
- CDiNR10_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first infli...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR10_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first infli...
- CDiNR10_beforeT Ileal mucosal biopsy from CDi non-responder before first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first infli...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423087
sample_title: CDiNR10_beforeT
source_name: Ileal mucosal biopsy from CDi non-responder before first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: Before first infliximab treatment
CDiNR10_afterT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CDiNR10_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixi...
- CDiNR10_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixi...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CDiNR10_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixi...
- CDiNR10_afterT Ileal mucosal biopsy from CDi non-responder after first infliximab treatment tissue: Ileum; disease: CD; response to infliximab: No; before or after first inflixi...
Source metadata
- Source name
- Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
- Characteristics
- tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM423088
sample_title: CDiNR10_afterT
source_name: Ileal mucosal biopsy from CDi non-responder after first infliximab treatment
characteristics: tissue: Ileum; disease: CD; response to infliximab: No; before or after first infliximab treatment: After first infliximab treatment