Matching samples

GSE169082 · Transcriptome Analysis of PBMCs in peripheral blood of patients with RA

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (0)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

No uncertain samples.

Excluded samples (7)

GSM5176189

Excluded

RA-1

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Does not meet requirement
        • The reported value differs from the selected requirement.
        • RA-1 PBMCs diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • specimen category excludes: Biofluid — Does not meet requirement
          • The reported value differs from the selected requirement.
          • RA-1 PBMCs diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
        Source metadata
        Source name
        PBMCs
        Characteristics
        diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
        Description
        Not reported
        Indexed organism evidence
        INFERRED · PARENT_INHERITED: Not reported
        Indexed assay evidence
        INFERRED · PARENT_INHERITED: Not reported
        Source
        GEO
        Original indexed metadata
        sample_accession: GSM5176189
sample_title: RA-1
source_name: PBMCs
characteristics: diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs

        GSM5176190

        Excluded

        RA-2

        Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

        Requirements and decision evidence
        • organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • specimen category: Tissue or biopsy — Does not meet requirement
              • The reported value differs from the selected requirement.
              • RA-2 PBMCs diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • specimen category excludes: Biofluid — Does not meet requirement
                • The reported value differs from the selected requirement.
                • RA-2 PBMCs diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
              Source metadata
              Source name
              PBMCs
              Characteristics
              diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM5176190
sample_title: RA-2
source_name: PBMCs
characteristics: diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs

              GSM5176191

              Excluded

              RA-3

              Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

              Requirements and decision evidence
              • organism: Homo sapiens — Insufficient evidence
                • The required value is not reported.
                • assay type: bulk RNA-seq — Insufficient evidence
                  • The required value is not reported.
                  • specimen category: Tissue or biopsy — Does not meet requirement
                    • The reported value differs from the selected requirement.
                    • RA-3 PBMCs diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Does not meet requirement
                      • The reported value differs from the selected requirement.
                      • RA-3 PBMCs diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
                    Source metadata
                    Source name
                    PBMCs
                    Characteristics
                    diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
                    Description
                    Not reported
                    Indexed organism evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Indexed assay evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Source
                    GEO
                    Original indexed metadata
                    sample_accession: GSM5176191
sample_title: RA-3
source_name: PBMCs
characteristics: diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs

                    GSM5176192

                    Excluded

                    RA-C

                    Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                    Requirements and decision evidence
                    • organism: Homo sapiens — Insufficient evidence
                      • The required value is not reported.
                      • assay type: bulk RNA-seq — Insufficient evidence
                        • The required value is not reported.
                        • specimen category: Tissue or biopsy — Does not meet requirement
                          • The reported value differs from the selected requirement.
                          • RA-C PBMCs diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                          • Supported by the indexed evidence.
                          • specimen category excludes: Biofluid — Does not meet requirement
                            • The reported value differs from the selected requirement.
                            • RA-C PBMCs diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
                          Source metadata
                          Source name
                          PBMCs
                          Characteristics
                          diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM5176192
sample_title: RA-C
source_name: PBMCs
characteristics: diagnosis: RA patient; tissue: Peripheral blood; cell type: PBMCs

                          GSM5176193

                          Excluded

                          control_1

                          Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

                          Requirements and decision evidence
                          • organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • specimen category: Tissue or biopsy — Does not meet requirement
                                • The reported value differs from the selected requirement.
                                • control_1 PBMCs diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                • Supported by the indexed evidence.
                                • specimen category excludes: Biofluid — Does not meet requirement
                                  • The reported value differs from the selected requirement.
                                  • control_1 PBMCs diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                                Source metadata
                                Source name
                                PBMCs
                                Characteristics
                                diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM5176193
sample_title: control_1
source_name: PBMCs
characteristics: diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs

                                GSM5176194

                                Excluded

                                control_2

                                Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Does not meet requirement
                                      • The reported value differs from the selected requirement.
                                      • control_2 PBMCs diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                      • Supported by the indexed evidence.
                                      • specimen category excludes: Biofluid — Does not meet requirement
                                        • The reported value differs from the selected requirement.
                                        • control_2 PBMCs diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                                      Source metadata
                                      Source name
                                      PBMCs
                                      Characteristics
                                      diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                                      Description
                                      Not reported
                                      Indexed organism evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Indexed assay evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Source
                                      GEO
                                      Original indexed metadata
                                      sample_accession: GSM5176194
sample_title: control_2
source_name: PBMCs
characteristics: diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs

                                      GSM5176195

                                      Excluded

                                      control_3

                                      Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

                                      Requirements and decision evidence
                                      • organism: Homo sapiens — Insufficient evidence
                                        • The required value is not reported.
                                        • assay type: bulk RNA-seq — Insufficient evidence
                                          • The required value is not reported.
                                          • specimen category: Tissue or biopsy — Does not meet requirement
                                            • The reported value differs from the selected requirement.
                                            • control_3 PBMCs diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                            • Supported by the indexed evidence.
                                            • specimen category excludes: Biofluid — Does not meet requirement
                                              • The reported value differs from the selected requirement.
                                              • control_3 PBMCs diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                                            Source metadata
                                            Source name
                                            PBMCs
                                            Characteristics
                                            diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs
                                            Description
                                            Not reported
                                            Indexed organism evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Indexed assay evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Source
                                            GEO
                                            Original indexed metadata
                                            sample_accession: GSM5176195
sample_title: control_3
source_name: PBMCs
characteristics: diagnosis: normal control; tissue: Peripheral blood; cell type: PBMCs