These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.
1416_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413223
sample_title: 1416_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
2204_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413224
sample_title: 2204_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 8
1506_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413225
sample_title: 1506_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 8
1679_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: Male; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413226
sample_title: 1679_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: Male; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
1339_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413227
sample_title: 1339_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
1339_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413228
sample_title: 1339_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 7
2003_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413229
sample_title: 2003_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 2
1908_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413230
sample_title: 1908_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 3
1904_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413231
sample_title: 1904_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 1
1904_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413232
sample_title: 1904_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
1820_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413233
sample_title: 1820_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
1349_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413234
sample_title: 1349_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
1718_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413235
sample_title: 1718_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
1328_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: Female; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413236
sample_title: 1328_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: Female; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
1328_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: Female; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413237
sample_title: 1328_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: Female; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 6
2008_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413238
sample_title: 2008_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 4
1414_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413239
sample_title: 1414_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
1505_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413240
sample_title: 1505_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 7
2104_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413241
sample_title: 2104_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 2
2104_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413242
sample_title: 2104_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 2
1415_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413243
sample_title: 1415_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
1415_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413244
sample_title: 1415_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 1
1348_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413245
sample_title: 1348_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 2
1819_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413246
sample_title: 1819_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 4
2501_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413247
sample_title: 2501_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
1929_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413248
sample_title: 1929_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 5
1821_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413249
sample_title: 1821_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 8
1821_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413250
sample_title: 1821_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: re
1359_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413251
sample_title: 1359_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
1508_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413252
sample_title: 1508_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
1816_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413253
sample_title: 1816_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 3
1816_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413254
sample_title: 1816_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 3
2503_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413255
sample_title: 2503_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
1714_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: Male; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413256
sample_title: 1714_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: Male; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 4
1714_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: Male; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413257
sample_title: 1714_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: Male; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 4
2009_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413258
sample_title: 2009_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: re
2302_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413259
sample_title: 2302_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 6
2302_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413260
sample_title: 2302_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: re
1912_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413261
sample_title: 1912_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
1686_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413262
sample_title: 1686_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 1
1686_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413263
sample_title: 1686_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
1688_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413264
sample_title: 1688_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
1921_UC inflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413265
sample_title: 1921_UC inflamed sigmoid colon
source_name: UC inflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 3
1921_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413266
sample_title: 1921_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 3
1692_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413267
sample_title: 1692_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
1690_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413268
sample_title: 1690_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
2001_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413269
sample_title: 2001_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
2001_UC uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413270
sample_title: 2001_UC uninflamed ascending/descending colon
source_name: UC uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
1918_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413271
sample_title: 1918_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
1906_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413272
sample_title: 1906_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
1687_UC inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413273
sample_title: 1687_UC inflamed ascending/descending colon
source_name: UC inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Inflamed; tissue: Colon; batch: 7
1907_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413274
sample_title: 1907_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 7
2101_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413275
sample_title: 2101_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 5
1811_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413276
sample_title: 1811_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 1
1691_UC uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- UC uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413277
sample_title: 1691_UC uninflamed sigmoid colon
source_name: UC uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Ulcerative colitis; inflammation: Uninflamed; tissue: Colon; batch: 3
1695_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413278
sample_title: 1695_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
1695_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413279
sample_title: 1695_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1695_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413280
sample_title: 1695_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
2010_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413281
sample_title: 2010_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
2010_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413282
sample_title: 2010_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
2207_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413283
sample_title: 2207_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
2207_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413284
sample_title: 2207_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
1817_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413285
sample_title: 1817_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
1817_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413286
sample_title: 1817_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: re
1347_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413287
sample_title: 1347_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
1815_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413288
sample_title: 1815_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1815_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413289
sample_title: 1815_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
1818_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413290
sample_title: 1818_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: re
1351_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413291
sample_title: 1351_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
1351_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413292
sample_title: 1351_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
1351_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413293
sample_title: 1351_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: re
2507_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413294
sample_title: 2507_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
2205_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413295
sample_title: 2205_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
2205_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413296
sample_title: 2205_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
2601_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413297
sample_title: 2601_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
2007_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413298
sample_title: 2007_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
2007_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413299
sample_title: 2007_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
1417_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413300
sample_title: 1417_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
1417_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413301
sample_title: 1417_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 1
1340_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413302
sample_title: 1340_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
1340_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413303
sample_title: 1340_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 7
1340_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413304
sample_title: 1340_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
1354_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413305
sample_title: 1354_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1697_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413306
sample_title: 1697_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1697_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413307
sample_title: 1697_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
1698_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413308
sample_title: 1698_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1698_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413309
sample_title: 1698_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
1420_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413310
sample_title: 1420_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
1420_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413311
sample_title: 1420_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
1345_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413312
sample_title: 1345_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
1345_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413313
sample_title: 1345_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1345_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413314
sample_title: 1345_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
1344_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413315
sample_title: 1344_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
1344_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413316
sample_title: 1344_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1822_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413317
sample_title: 1822_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
1822_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413318
sample_title: 1822_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
1806_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413319
sample_title: 1806_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
1806_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413320
sample_title: 1806_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
1806_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413321
sample_title: 1806_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
1694_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413322
sample_title: 1694_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
1694_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413323
sample_title: 1694_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
1419_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413324
sample_title: 1419_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1419_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413325
sample_title: 1419_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
2002_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413326
sample_title: 2002_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
2002_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413327
sample_title: 2002_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 3
1808_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413328
sample_title: 1808_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
1331_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413329
sample_title: 1331_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
1331_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413330
sample_title: 1331_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 7
1928_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413331
sample_title: 1928_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
1353_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413332
sample_title: 1353_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: re
1680_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413333
sample_title: 1680_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1680_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413334
sample_title: 1680_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
1346_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413335
sample_title: 1346_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1696_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413336
sample_title: 1696_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
1696_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413337
sample_title: 1696_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
1696_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413338
sample_title: 1696_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
1336_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413339
sample_title: 1336_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1336_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413340
sample_title: 1336_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
1336_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413341
sample_title: 1336_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 5
1421_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413342
sample_title: 1421_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 6
1205_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413343
sample_title: 1205_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
1205_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413344
sample_title: 1205_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
1813_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413345
sample_title: 1813_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 3
1813_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413346
sample_title: 1813_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
1335_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413347
sample_title: 1335_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
1923_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413348
sample_title: 1923_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
1814_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413349
sample_title: 1814_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1413_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413350
sample_title: 1413_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 3
1413_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413351
sample_title: 1413_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 3
1358_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413352
sample_title: 1358_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1418_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413353
sample_title: 1418_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
1418_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413354
sample_title: 1418_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1926_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413355
sample_title: 1926_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
1926_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413356
sample_title: 1926_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1823_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413357
sample_title: 1823_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1823_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413358
sample_title: 1823_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: re
1203_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413359
sample_title: 1203_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
1700_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413360
sample_title: 1700_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1700_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413361
sample_title: 1700_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 4
1504_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413362
sample_title: 1504_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1504_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413363
sample_title: 1504_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 5
1341_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413364
sample_title: 1341_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
1341_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413365
sample_title: 1341_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: re
1350_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413366
sample_title: 1350_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: re
1329_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413367
sample_title: 1329_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1352_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413368
sample_title: 1352_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
1352_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413369
sample_title: 1352_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1352_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413370
sample_title: 1352_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 4
1357_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413371
sample_title: 1357_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
1357_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413372
sample_title: 1357_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
1357_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413373
sample_title: 1357_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
2005_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413374
sample_title: 2005_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
2005_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413375
sample_title: 2005_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1355_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413376
sample_title: 1355_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
1338_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413377
sample_title: 1338_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
1338_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413378
sample_title: 1338_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 3
1338_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413379
sample_title: 1338_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
1507_Crohn's inflamed ascending/descending colon_rep1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413380
sample_title: 1507_Crohn's inflamed ascending/descending colon_rep1
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
1507_Crohn's inflamed ascending/descending colon_rep2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413381
sample_title: 1507_Crohn's inflamed ascending/descending colon_rep2
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
1507_Crohn's inflamed ascending/descending colon_rep3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413382
sample_title: 1507_Crohn's inflamed ascending/descending colon_rep3
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
1507_Crohn's inflamed ascending/descending colon_rep4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413383
sample_title: 1507_Crohn's inflamed ascending/descending colon_rep4
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
2502_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413384
sample_title: 2502_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
2506_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413385
sample_title: 2506_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
2506_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413386
sample_title: 2506_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1927_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413387
sample_title: 1927_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1927_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413388
sample_title: 1927_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
2004_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413389
sample_title: 2004_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
2004_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413390
sample_title: 2004_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1332_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413391
sample_title: 1332_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
1332_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413392
sample_title: 1332_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 7
2206_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413393
sample_title: 2206_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1342_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413394
sample_title: 1342_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1342_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413395
sample_title: 1342_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 2
1342_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413396
sample_title: 1342_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: re
1343_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413397
sample_title: 1343_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
1343_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413398
sample_title: 1343_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: re
1824_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413399
sample_title: 1824_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1824_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413400
sample_title: 1824_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
1824_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413401
sample_title: 1824_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 4
2006_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413402
sample_title: 2006_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
2006_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413403
sample_title: 2006_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
2203_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413404
sample_title: 2203_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 8
2203_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413405
sample_title: 2203_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
2203_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413406
sample_title: 2203_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
1681_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413407
sample_title: 1681_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1356_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413408
sample_title: 1356_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 4
1356_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413409
sample_title: 1356_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 4
1356_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413410
sample_title: 1356_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 4
1204_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413411
sample_title: 1204_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 1
1717_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413412
sample_title: 1717_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
1717_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413413
sample_title: 1717_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
1810_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413414
sample_title: 1810_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
1810_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413415
sample_title: 1810_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 3
1333_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413416
sample_title: 1333_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
1805_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413417
sample_title: 1805_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
1805_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413418
sample_title: 1805_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
1805_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413419
sample_title: 1805_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
1683_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413420
sample_title: 1683_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
1683_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413421
sample_title: 1683_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
1683_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: re
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413422
sample_title: 1683_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: re
1678_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413423
sample_title: 1678_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
1678_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413424
sample_title: 1678_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
1684_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413425
sample_title: 1684_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
1684_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413426
sample_title: 1684_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
1715_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413427
sample_title: 1715_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 3
1715_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413428
sample_title: 1715_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 3
1713_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413429
sample_title: 1713_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
1713_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413430
sample_title: 1713_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 6
1716_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413431
sample_title: 1716_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 1
1716_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413432
sample_title: 1716_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 1
1716_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413433
sample_title: 1716_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 1
1330_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413434
sample_title: 1330_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 7
1330_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413435
sample_title: 1330_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 7
1503_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413436
sample_title: 1503_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 5
1503_Crohn's inflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413437
sample_title: 1503_Crohn's inflamed terminal ileum
source_name: Crohn's inflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Ileum; batch: 5
1503_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413438
sample_title: 1503_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 5
1682_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413439
sample_title: 1682_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 6
1682_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413440
sample_title: 1682_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 6
1712_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413441
sample_title: 1712_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 2
1712_Crohn's inflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's inflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413442
sample_title: 1712_Crohn's inflamed ascending/descending colon
source_name: Crohn's inflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Inflamed; tissue: Colon; batch: 2
1712_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413443
sample_title: 1712_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Male; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 2
1677_Crohn's uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed terminal ileum
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413444
sample_title: 1677_Crohn's uninflamed terminal ileum
source_name: Crohn's uninflamed terminal ileum
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Ileum; batch: 8
1677_Crohn's uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Crohn's uninflamed ascending/descending colon
- Characteristics
- Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413445
sample_title: 1677_Crohn's uninflamed ascending/descending colon
source_name: Crohn's uninflamed ascending/descending colon
characteristics: Sex: Female; diagnosis: Crohn's disease; inflammation: Uninflamed; tissue: Colon; batch: 8
2102_Controls uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413446
sample_title: 2102_Controls uninflamed terminal ileum
source_name: Controls uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 5
2102_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413447
sample_title: 2102_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
2102_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413448
sample_title: 2102_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
1915_Controls uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413449
sample_title: 1915_Controls uninflamed terminal ileum
source_name: Controls uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 5
1915_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413450
sample_title: 1915_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
1915_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413451
sample_title: 1915_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
1901_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413452
sample_title: 1901_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 1
1901_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413453
sample_title: 1901_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 1
1905_Controls uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413454
sample_title: 1905_Controls uninflamed terminal ileum
source_name: Controls uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 7
1905_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413455
sample_title: 1905_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 7
1905_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413456
sample_title: 1905_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 7
1914_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413457
sample_title: 1914_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
1693_Controls uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413458
sample_title: 1693_Controls uninflamed terminal ileum
source_name: Controls uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 3
1693_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413459
sample_title: 1693_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
1693_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413460
sample_title: 1693_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
1910_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413461
sample_title: 1910_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 7
1910_Controls uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413462
sample_title: 1910_Controls uninflamed terminal ileum
source_name: Controls uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 7
1910_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413463
sample_title: 1910_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 7
1902_Controls uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413464
sample_title: 1902_Controls uninflamed terminal ileum
source_name: Controls uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 3
1902_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413465
sample_title: 1902_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
1902_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413466
sample_title: 1902_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
1903_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413467
sample_title: 1903_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
1903_Controls uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413468
sample_title: 1903_Controls uninflamed terminal ileum
source_name: Controls uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 5
1903_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413469
sample_title: 1903_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 5
1917_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413470
sample_title: 1917_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 1
1917_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413471
sample_title: 1917_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 1
1911_Controls uninflamed terminal ileum
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed terminal ileum
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413472
sample_title: 1911_Controls uninflamed terminal ileum
source_name: Controls uninflamed terminal ileum
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Ileum; batch: 3
1911_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413473
sample_title: 1911_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
1911_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413474
sample_title: 1911_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
1909_Controls uninflamed sigmoid colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed sigmoid colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413475
sample_title: 1909_Controls uninflamed sigmoid colon
source_name: Controls uninflamed sigmoid colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
1909_Controls uninflamed ascending/descending colon
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Controls uninflamed ascending/descending colon
- Characteristics
- Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM5413476
sample_title: 1909_Controls uninflamed ascending/descending colon
source_name: Controls uninflamed ascending/descending colon
characteristics: Sex: not determined; diagnosis: Healthy control; inflammation: Uninflamed; tissue: Colon; batch: 3