Matching samples

GSE195557 · TNFR2 is critical for TNF-induced rheumatoid arthritis fibroblast-like synoviocyte inflammation

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

8 case / 8 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (16)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM5840489

Uncertain

St1_sictrl_ctrl

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation control marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
          • Supported by the indexed evidence.
          • specimen category excludes: Biofluid — Meets requirement
            • Supported by the indexed evidence.
            Source metadata
            Source name
            Fibrobst-like synoviocytes
            Characteristics
            tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: Control; patient: St1
            Description
            Not reported
            Indexed organism evidence
            INFERRED · PARENT_INHERITED: Not reported
            Indexed assay evidence
            INFERRED · PARENT_INHERITED: Not reported
            Source
            GEO
            Original indexed metadata
            sample_accession: GSM5840489
sample_title: St1_sictrl_ctrl
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: Control; patient: St1

            GSM5840490

            Uncertain

            St1_siTNFR2_TNF

            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation marker detected.

            Requirements and decision evidence
            • organism: Homo sapiens — Insufficient evidence
              • The required value is not reported.
              • assay type: bulk RNA-seq — Insufficient evidence
                • The required value is not reported.
                • specimen category: Tissue or biopsy — Insufficient evidence
                  • The required value is not reported.
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Meets requirement
                      • Supported by the indexed evidence.
                      Source metadata
                      Source name
                      Fibrobst-like synoviocytes
                      Characteristics
                      tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: TNF; patient: St1
                      Description
                      Not reported
                      Indexed organism evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Indexed assay evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Source
                      GEO
                      Original indexed metadata
                      sample_accession: GSM5840490
sample_title: St1_siTNFR2_TNF
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: TNF; patient: St1

                      GSM5840491

                      Uncertain

                      St2_sictrl_ctrl

                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation control marker detected.

                      Requirements and decision evidence
                      • organism: Homo sapiens — Insufficient evidence
                        • The required value is not reported.
                        • assay type: bulk RNA-seq — Insufficient evidence
                          • The required value is not reported.
                          • specimen category: Tissue or biopsy — Insufficient evidence
                            • The required value is not reported.
                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                              • Supported by the indexed evidence.
                              • specimen category excludes: Biofluid — Meets requirement
                                • Supported by the indexed evidence.
                                Source metadata
                                Source name
                                Fibrobst-like synoviocytes
                                Characteristics
                                tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: Control; patient: St2
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM5840491
sample_title: St2_sictrl_ctrl
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: Control; patient: St2

                                GSM5840492

                                Uncertain

                                St2_sictrl_TNF

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation control marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                        • Supported by the indexed evidence.
                                        • specimen category excludes: Biofluid — Meets requirement
                                          • Supported by the indexed evidence.
                                          Source metadata
                                          Source name
                                          Fibrobst-like synoviocytes
                                          Characteristics
                                          tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: TNF; patient: St2
                                          Description
                                          Not reported
                                          Indexed organism evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Indexed assay evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Source
                                          GEO
                                          Original indexed metadata
                                          sample_accession: GSM5840492
sample_title: St2_sictrl_TNF
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: TNF; patient: St2

                                          GSM5840493

                                          Uncertain

                                          St2_siTNFR2_ctrl

                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation marker detected.

                                          Requirements and decision evidence
                                          • organism: Homo sapiens — Insufficient evidence
                                            • The required value is not reported.
                                            • assay type: bulk RNA-seq — Insufficient evidence
                                              • The required value is not reported.
                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                • The required value is not reported.
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Meets requirement
                                                    • Supported by the indexed evidence.
                                                    Source metadata
                                                    Source name
                                                    Fibrobst-like synoviocytes
                                                    Characteristics
                                                    tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: Control; patient: St2
                                                    Description
                                                    Not reported
                                                    Indexed organism evidence
                                                    INFERRED · PARENT_INHERITED: Not reported
                                                    Indexed assay evidence
                                                    INFERRED · PARENT_INHERITED: Not reported
                                                    Source
                                                    GEO
                                                    Original indexed metadata
                                                    sample_accession: GSM5840493
sample_title: St2_siTNFR2_ctrl
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: Control; patient: St2

                                                    GSM5840494

                                                    Uncertain

                                                    St1_sictrl_TNF

                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation control marker detected.

                                                    Requirements and decision evidence
                                                    • organism: Homo sapiens — Insufficient evidence
                                                      • The required value is not reported.
                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                        • The required value is not reported.
                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                          • The required value is not reported.
                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                            • Supported by the indexed evidence.
                                                            • specimen category excludes: Biofluid — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              Source metadata
                                                              Source name
                                                              Fibrobst-like synoviocytes
                                                              Characteristics
                                                              tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: TNF; patient: St1
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM5840494
sample_title: St1_sictrl_TNF
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: TNF; patient: St1

                                                              GSM5840495

                                                              Uncertain

                                                              St2_siTNFR2_TNF

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                      • Supported by the indexed evidence.
                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                        • Supported by the indexed evidence.
                                                                        Source metadata
                                                                        Source name
                                                                        Fibrobst-like synoviocytes
                                                                        Characteristics
                                                                        tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: TNF; patient: St2
                                                                        Description
                                                                        Not reported
                                                                        Indexed organism evidence
                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                        Indexed assay evidence
                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                        Source
                                                                        GEO
                                                                        Original indexed metadata
                                                                        sample_accession: GSM5840495
sample_title: St2_siTNFR2_TNF
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: TNF; patient: St2

                                                                        GSM5840496

                                                                        Uncertain

                                                                        St3_sictrl_ctrl

                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation control marker detected.

                                                                        Requirements and decision evidence
                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                  • Supported by the indexed evidence.
                                                                                  Source metadata
                                                                                  Source name
                                                                                  Fibrobst-like synoviocytes
                                                                                  Characteristics
                                                                                  tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: Control; patient: St3
                                                                                  Description
                                                                                  Not reported
                                                                                  Indexed organism evidence
                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                  Indexed assay evidence
                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                  Source
                                                                                  GEO
                                                                                  Original indexed metadata
                                                                                  sample_accession: GSM5840496
sample_title: St3_sictrl_ctrl
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: Control; patient: St3

                                                                                  GSM5840497

                                                                                  Uncertain

                                                                                  St3_sictrl_TNF

                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation control marker detected.

                                                                                  Requirements and decision evidence
                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                          • Supported by the indexed evidence.
                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            Source metadata
                                                                                            Source name
                                                                                            Fibrobst-like synoviocytes
                                                                                            Characteristics
                                                                                            tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: TNF; patient: St3
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM5840497
sample_title: St3_sictrl_TNF
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: TNF; patient: St3

                                                                                            GSM5840498

                                                                                            Uncertain

                                                                                            St3_siTNFR2_ctrl

                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                    • Supported by the indexed evidence.
                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                      • Supported by the indexed evidence.
                                                                                                      Source metadata
                                                                                                      Source name
                                                                                                      Fibrobst-like synoviocytes
                                                                                                      Characteristics
                                                                                                      tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: Control; patient: St3
                                                                                                      Description
                                                                                                      Not reported
                                                                                                      Indexed organism evidence
                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                      Indexed assay evidence
                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                      Source
                                                                                                      GEO
                                                                                                      Original indexed metadata
                                                                                                      sample_accession: GSM5840498
sample_title: St3_siTNFR2_ctrl
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: Control; patient: St3

                                                                                                      GSM5840499

                                                                                                      Uncertain

                                                                                                      St3_siTNFR2_TNF

                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation marker detected.

                                                                                                      Requirements and decision evidence
                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • specimen category excludes: Biofluid — Meets requirement
                                                                                                                • Supported by the indexed evidence.
                                                                                                                Source metadata
                                                                                                                Source name
                                                                                                                Fibrobst-like synoviocytes
                                                                                                                Characteristics
                                                                                                                tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: TNF; patient: St3
                                                                                                                Description
                                                                                                                Not reported
                                                                                                                Indexed organism evidence
                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                Indexed assay evidence
                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                Source
                                                                                                                GEO
                                                                                                                Original indexed metadata
                                                                                                                sample_accession: GSM5840499
sample_title: St3_siTNFR2_TNF
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: TNF; patient: St3

                                                                                                                GSM5840500

                                                                                                                Uncertain

                                                                                                                St4_sictrl_ctrl

                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation control marker detected.

                                                                                                                Requirements and decision evidence
                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                        • Supported by the indexed evidence.
                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          Source metadata
                                                                                                                          Source name
                                                                                                                          Fibrobst-like synoviocytes
                                                                                                                          Characteristics
                                                                                                                          tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: Control; patient: St4
                                                                                                                          Description
                                                                                                                          Not reported
                                                                                                                          Indexed organism evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Indexed assay evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Source
                                                                                                                          GEO
                                                                                                                          Original indexed metadata
                                                                                                                          sample_accession: GSM5840500
sample_title: St4_sictrl_ctrl
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: Control; patient: St4

                                                                                                                          GSM5840501

                                                                                                                          Uncertain

                                                                                                                          St4_sictrl_TNF

                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation control marker detected.

                                                                                                                          Requirements and decision evidence
                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                              • The required value is not reported.
                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                • The required value is not reported.
                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                  • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                    Source metadata
                                                                                                                                    Source name
                                                                                                                                    Fibrobst-like synoviocytes
                                                                                                                                    Characteristics
                                                                                                                                    tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: TNF; patient: St4
                                                                                                                                    Description
                                                                                                                                    Not reported
                                                                                                                                    Indexed organism evidence
                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                    Indexed assay evidence
                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                    Source
                                                                                                                                    GEO
                                                                                                                                    Original indexed metadata
                                                                                                                                    sample_accession: GSM5840501
sample_title: St4_sictrl_TNF
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siControl; treatment: TNF; patient: St4

                                                                                                                                    GSM5840502

                                                                                                                                    Uncertain

                                                                                                                                    St4_siTNFR2_ctrl

                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation marker detected.

                                                                                                                                    Requirements and decision evidence
                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                      • The required value is not reported.
                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                          • The required value is not reported.
                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                            • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                              Source metadata
                                                                                                                                              Source name
                                                                                                                                              Fibrobst-like synoviocytes
                                                                                                                                              Characteristics
                                                                                                                                              tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: Control; patient: St4
                                                                                                                                              Description
                                                                                                                                              Not reported
                                                                                                                                              Indexed organism evidence
                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                              Indexed assay evidence
                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                              Source
                                                                                                                                              GEO
                                                                                                                                              Original indexed metadata
                                                                                                                                              sample_accession: GSM5840502
sample_title: St4_siTNFR2_ctrl
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: Control; patient: St4

                                                                                                                                              GSM5840503

                                                                                                                                              Uncertain

                                                                                                                                              St4_siTNFR2_TNF

                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation marker detected.

                                                                                                                                              Requirements and decision evidence
                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                • The required value is not reported.
                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                  • The required value is not reported.
                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                        Source metadata
                                                                                                                                                        Source name
                                                                                                                                                        Fibrobst-like synoviocytes
                                                                                                                                                        Characteristics
                                                                                                                                                        tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: TNF; patient: St4
                                                                                                                                                        Description
                                                                                                                                                        Not reported
                                                                                                                                                        Indexed organism evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Indexed assay evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Source
                                                                                                                                                        GEO
                                                                                                                                                        Original indexed metadata
                                                                                                                                                        sample_accession: GSM5840503
sample_title: St4_siTNFR2_TNF
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: TNF; patient: St4

                                                                                                                                                        GSM5840504

                                                                                                                                                        Uncertain

                                                                                                                                                        St1_siTNFR2_ctrl

                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Genetic perturbation marker detected.

                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                            • The required value is not reported.
                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                              • The required value is not reported.
                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                  Source metadata
                                                                                                                                                                  Source name
                                                                                                                                                                  Fibrobst-like synoviocytes
                                                                                                                                                                  Characteristics
                                                                                                                                                                  tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: Control; patient: St1
                                                                                                                                                                  Description
                                                                                                                                                                  Not reported
                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                  Source
                                                                                                                                                                  GEO
                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                  sample_accession: GSM5840504
sample_title: St1_siTNFR2_ctrl
source_name: Fibrobst-like synoviocytes
characteristics: tissue: Fibrobst-like synoviocytes; disease: Rheumatoid Arthritis; knockdown: siTNFR2; treatment: Control; patient: St1

                                                                                                                                                                  Excluded samples (0)

                                                                                                                                                                  No excluded samples.