Matching samples

GSE197112 · Development of gene expression signatures for human liver fibrosis

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

4 case / 4 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (8)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM5909318

Uncertain

fibrosis1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • fibrosis1 liver fibrosis people biopsy tissue1 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
        • fibrosis1 liver fibrosis people biopsy tissue1 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • specimen category excludes: Biofluid — Insufficient evidence
          • The required value is not reported.
          • fibrosis1 liver fibrosis people biopsy tissue1 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
          • fibrosis1 liver fibrosis people biopsy tissue1 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
        Source metadata
        Source name
        liver fibrosis people biopsy tissue1
        Characteristics
        disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
        Description
        Not reported
        Indexed organism evidence
        INFERRED · PARENT_INHERITED: Not reported
        Indexed assay evidence
        INFERRED · PARENT_INHERITED: Not reported
        Source
        GEO
        Original indexed metadata
        sample_accession: GSM5909318
sample_title: fibrosis1
source_name: liver fibrosis people biopsy tissue1
characteristics: disease state: liver fibrosis; tissue: liver; Sex: pooled male and female

        GSM5909319

        Uncertain

        fibrosis2

        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

        Requirements and decision evidence
        • organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • specimen category: Tissue or biopsy — Insufficient evidence
              • The required value is not reported.
              • fibrosis2 liver fibrosis people biopsy tissue2 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
              • fibrosis2 liver fibrosis people biopsy tissue2 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • specimen category excludes: Biofluid — Insufficient evidence
                • The required value is not reported.
                • fibrosis2 liver fibrosis people biopsy tissue2 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                • fibrosis2 liver fibrosis people biopsy tissue2 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
              Source metadata
              Source name
              liver fibrosis people biopsy tissue2
              Characteristics
              disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM5909319
sample_title: fibrosis2
source_name: liver fibrosis people biopsy tissue2
characteristics: disease state: liver fibrosis; tissue: liver; Sex: pooled male and female

              GSM5909320

              Uncertain

              fibrosis3

              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

              Requirements and decision evidence
              • organism: Homo sapiens — Insufficient evidence
                • The required value is not reported.
                • assay type: bulk RNA-seq — Insufficient evidence
                  • The required value is not reported.
                  • specimen category: Tissue or biopsy — Insufficient evidence
                    • The required value is not reported.
                    • fibrosis3 liver fibrosis people biopsy tissue3 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                    • fibrosis3 liver fibrosis people biopsy tissue3 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Insufficient evidence
                      • The required value is not reported.
                      • fibrosis3 liver fibrosis people biopsy tissue3 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                      • fibrosis3 liver fibrosis people biopsy tissue3 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                    Source metadata
                    Source name
                    liver fibrosis people biopsy tissue3
                    Characteristics
                    disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                    Description
                    Not reported
                    Indexed organism evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Indexed assay evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Source
                    GEO
                    Original indexed metadata
                    sample_accession: GSM5909320
sample_title: fibrosis3
source_name: liver fibrosis people biopsy tissue3
characteristics: disease state: liver fibrosis; tissue: liver; Sex: pooled male and female

                    GSM5909321

                    Uncertain

                    fibrosis4

                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                    Requirements and decision evidence
                    • organism: Homo sapiens — Insufficient evidence
                      • The required value is not reported.
                      • assay type: bulk RNA-seq — Insufficient evidence
                        • The required value is not reported.
                        • specimen category: Tissue or biopsy — Insufficient evidence
                          • The required value is not reported.
                          • fibrosis4 liver fibrosis people biopsy tissue4 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                          • fibrosis4 liver fibrosis people biopsy tissue4 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                          • Supported by the indexed evidence.
                          • specimen category excludes: Biofluid — Insufficient evidence
                            • The required value is not reported.
                            • fibrosis4 liver fibrosis people biopsy tissue4 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                            • fibrosis4 liver fibrosis people biopsy tissue4 disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                          Source metadata
                          Source name
                          liver fibrosis people biopsy tissue4
                          Characteristics
                          disease state: liver fibrosis; tissue: liver; Sex: pooled male and female
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM5909321
sample_title: fibrosis4
source_name: liver fibrosis people biopsy tissue4
characteristics: disease state: liver fibrosis; tissue: liver; Sex: pooled male and female

                          GSM5909322

                          Uncertain

                          non-fibrosis1

                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                          Requirements and decision evidence
                          • organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • specimen category: Tissue or biopsy — Insufficient evidence
                                • The required value is not reported.
                                • non-fibrosis1 normal people liver biopsy tissue1 disease state: normal; tissue: liver; Sex: pooled male and female
                                • non-fibrosis1 normal people liver biopsy tissue1 disease state: normal; tissue: liver; Sex: pooled male and female
                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                • Supported by the indexed evidence.
                                • specimen category excludes: Biofluid — Insufficient evidence
                                  • The required value is not reported.
                                  • non-fibrosis1 normal people liver biopsy tissue1 disease state: normal; tissue: liver; Sex: pooled male and female
                                  • non-fibrosis1 normal people liver biopsy tissue1 disease state: normal; tissue: liver; Sex: pooled male and female
                                Source metadata
                                Source name
                                normal people liver biopsy tissue1
                                Characteristics
                                disease state: normal; tissue: liver; Sex: pooled male and female
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM5909322
sample_title: non-fibrosis1
source_name: normal people liver biopsy tissue1
characteristics: disease state: normal; tissue: liver; Sex: pooled male and female

                                GSM5909323

                                Uncertain

                                non-fibrosis2

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • non-fibrosis2 normal people liver biopsy tissue2 disease state: normal; tissue: liver; Sex: pooled male and female
                                      • non-fibrosis2 normal people liver biopsy tissue2 disease state: normal; tissue: liver; Sex: pooled male and female
                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                      • Supported by the indexed evidence.
                                      • specimen category excludes: Biofluid — Insufficient evidence
                                        • The required value is not reported.
                                        • non-fibrosis2 normal people liver biopsy tissue2 disease state: normal; tissue: liver; Sex: pooled male and female
                                        • non-fibrosis2 normal people liver biopsy tissue2 disease state: normal; tissue: liver; Sex: pooled male and female
                                      Source metadata
                                      Source name
                                      normal people liver biopsy tissue2
                                      Characteristics
                                      disease state: normal; tissue: liver; Sex: pooled male and female
                                      Description
                                      Not reported
                                      Indexed organism evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Indexed assay evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Source
                                      GEO
                                      Original indexed metadata
                                      sample_accession: GSM5909323
sample_title: non-fibrosis2
source_name: normal people liver biopsy tissue2
characteristics: disease state: normal; tissue: liver; Sex: pooled male and female

                                      GSM5909324

                                      Uncertain

                                      non-fibrosis3

                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                      Requirements and decision evidence
                                      • organism: Homo sapiens — Insufficient evidence
                                        • The required value is not reported.
                                        • assay type: bulk RNA-seq — Insufficient evidence
                                          • The required value is not reported.
                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                            • The required value is not reported.
                                            • non-fibrosis3 normal people liver biopsy tissue3 disease state: normal; tissue: liver; Sex: pooled male and female
                                            • non-fibrosis3 normal people liver biopsy tissue3 disease state: normal; tissue: liver; Sex: pooled male and female
                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                            • Supported by the indexed evidence.
                                            • specimen category excludes: Biofluid — Insufficient evidence
                                              • The required value is not reported.
                                              • non-fibrosis3 normal people liver biopsy tissue3 disease state: normal; tissue: liver; Sex: pooled male and female
                                              • non-fibrosis3 normal people liver biopsy tissue3 disease state: normal; tissue: liver; Sex: pooled male and female
                                            Source metadata
                                            Source name
                                            normal people liver biopsy tissue3
                                            Characteristics
                                            disease state: normal; tissue: liver; Sex: pooled male and female
                                            Description
                                            Not reported
                                            Indexed organism evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Indexed assay evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Source
                                            GEO
                                            Original indexed metadata
                                            sample_accession: GSM5909324
sample_title: non-fibrosis3
source_name: normal people liver biopsy tissue3
characteristics: disease state: normal; tissue: liver; Sex: pooled male and female

                                            GSM5909325

                                            Uncertain

                                            non-fibrosis4

                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                            Requirements and decision evidence
                                            • organism: Homo sapiens — Insufficient evidence
                                              • The required value is not reported.
                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                • The required value is not reported.
                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                  • The required value is not reported.
                                                  • non-fibrosis4 normal people liver biopsy tissue4 disease state: normal; tissue: liver; Sex: pooled male and female
                                                  • non-fibrosis4 normal people liver biopsy tissue4 disease state: normal; tissue: liver; Sex: pooled male and female
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                    • The required value is not reported.
                                                    • non-fibrosis4 normal people liver biopsy tissue4 disease state: normal; tissue: liver; Sex: pooled male and female
                                                    • non-fibrosis4 normal people liver biopsy tissue4 disease state: normal; tissue: liver; Sex: pooled male and female
                                                  Source metadata
                                                  Source name
                                                  normal people liver biopsy tissue4
                                                  Characteristics
                                                  disease state: normal; tissue: liver; Sex: pooled male and female
                                                  Description
                                                  Not reported
                                                  Indexed organism evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Indexed assay evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Source
                                                  GEO
                                                  Original indexed metadata
                                                  sample_accession: GSM5909325
sample_title: non-fibrosis4
source_name: normal people liver biopsy tissue4
characteristics: disease state: normal; tissue: liver; Sex: pooled male and female

                                                  Excluded samples (0)

                                                  No excluded samples.