These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.
CNTO1275CRD3002-20554 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20554 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20554; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20554 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20554; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20554 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20554; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20554 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20554; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20554; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268367
sample_title: CNTO1275CRD3002-20554 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20554; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20667 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20667 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20667; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20667 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20667; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20667 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20667; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20667 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20667; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20667; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268368
sample_title: CNTO1275CRD3002-20667 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20667; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20449 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20449 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20449; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20449 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20449; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20449 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20449; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20449 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20449; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20449; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268369
sample_title: CNTO1275CRD3002-20449 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20449; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20927 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20927 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20927; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20927 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20927; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20927 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20927; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20927 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20927; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20927; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268370
sample_title: CNTO1275CRD3002-20927 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20927; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20270 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20270 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20270; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20270 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20270; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20270 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20270; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20270 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20270; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20270; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268371
sample_title: CNTO1275CRD3002-20270 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20270; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
CNTO1275CRD3002-20072 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20072 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20072; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20072 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20072; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20072 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20072; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20072 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20072; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20072; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268372
sample_title: CNTO1275CRD3002-20072 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20072; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20109 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20109 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20109; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20109 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20109; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20109 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20109; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20109 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20109; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20109; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268373
sample_title: CNTO1275CRD3002-20109 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20109; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20346 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20346 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20346; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20346 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20346; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20346 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20346; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20346 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20346; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20346; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268374
sample_title: CNTO1275CRD3002-20346 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20346; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
HC-1 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-1 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-1; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-1 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-1; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-1 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-1; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-1 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-1; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-1; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268375
sample_title: HC-1 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-1; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-2 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-2 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-2; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-2 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-2; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-2 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-2; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-2 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-2; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-2; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268376
sample_title: HC-2 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-2; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-3 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-3 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-3; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-3 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-3; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-3 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-3; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-3 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-3; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-3; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268377
sample_title: HC-3 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-3; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-4 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-4 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-4; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-4 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-4; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-4 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-4; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-4 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-4; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-4; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268378
sample_title: HC-4 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-4; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-5 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-5 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-5; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-5 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-5; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-5 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-5; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-5 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-5; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-5; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268379
sample_title: HC-5 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-5; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-6 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-6 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-6; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-6 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-6; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-6 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-6; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-6 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-6; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-6; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268380
sample_title: HC-6 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-6; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-7 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-7 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-7; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-7 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-7; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-7 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-7; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-7 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-7; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-7; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268381
sample_title: HC-7 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-7; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-8 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-8 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-8; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-8 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-8; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-8 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-8; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-8 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-8; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-8; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268382
sample_title: HC-8 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-8; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-9 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-9 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-9; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-9 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-9; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-9 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-9; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
- HC-9 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-9; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at ...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-9; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268383
sample_title: HC-9 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-9; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-10 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-10 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-10; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-10 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-10; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-10 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-10; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-10 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-10; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-10; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268384
sample_title: HC-10 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-10; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-11 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-11 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-11; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-11 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-11; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-11 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-11; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-11 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-11; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-11; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268385
sample_title: HC-11 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-11; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-12 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-12 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-12; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-12 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-12; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-12 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-12; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-12 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-12; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-12; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268386
sample_title: HC-12 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-12; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-13 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-13 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-13; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-13 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-13; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-13 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-13; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-13 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-13; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-13; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268387
sample_title: HC-13 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-13; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-14 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-14 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-14; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-14 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-14; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-14 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-14; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-14 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-14; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-14; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268388
sample_title: HC-14 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-14; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-15 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-15 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-15; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-15 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-15; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-15 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-15; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-15 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-15; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-15; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268389
sample_title: HC-15 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-15; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-16 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-16 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-16; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-16 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-16; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-16 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-16; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-16 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-16; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-16; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268390
sample_title: HC-16 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-16; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-17 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-17 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-17; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-17 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-17; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-17 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-17; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-17 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-17; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-17; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268391
sample_title: HC-17 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-17; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-18 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-18 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-18; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-18 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-18; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-18 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-18; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-18 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-18; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-18; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268392
sample_title: HC-18 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-18; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-19 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-19 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-19; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-19 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-19; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-19 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-19; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-19 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-19; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-19; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268393
sample_title: HC-19 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-19; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-20 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-20 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-20; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-20 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-20; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-20 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-20; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-20 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-20; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-20; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268394
sample_title: HC-20 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-20; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-21 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-21 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-21; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-21 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-21; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-21 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-21; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-21 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-21; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-21; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268395
sample_title: HC-21 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-21; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-22 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-22 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-22; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-22 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-22; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-22 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-22; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-22 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-22; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-22; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268396
sample_title: HC-22 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-22; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
HC-23 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- HC-23 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-23; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-23 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-23; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- HC-23 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-23; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
- HC-23 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: HC-23; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing a...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: HC-23; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268397
sample_title: HC-23 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: HC-23; visit: I-WK0; diagnosis: healthy control; treatment: NA; inflamed area at week 0: NA; mucosal healing at week 8: NA
CNTO1275CRD3002-20660 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20660 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20660; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20660 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20660; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20660 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20660; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20660 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20660; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20660; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268398
sample_title: CNTO1275CRD3002-20660 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20660; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20458 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20458 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20458; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20458 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20458; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20458 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20458; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20458 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20458; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20458; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268399
sample_title: CNTO1275CRD3002-20458 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20458; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20393 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20393 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20393; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20393 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20393; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20393 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20393; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20393 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20393; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20393; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268400
sample_title: CNTO1275CRD3002-20393 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20393; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20908 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20908 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20908; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20908 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20908; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20908 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20908; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20908 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20908; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20908; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268401
sample_title: CNTO1275CRD3002-20908 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20908; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20679 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20679 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20679; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20679 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20679; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20679 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20679; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20679 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20679; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20679; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268402
sample_title: CNTO1275CRD3002-20679 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20679; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20291 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20291 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20291; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20291 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20291; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20291 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20291; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20291 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20291; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20291; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268403
sample_title: CNTO1275CRD3002-20291 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20291; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20209 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20209 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20209; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20209 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20209; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20209 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20209; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20209 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20209; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20209; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268404
sample_title: CNTO1275CRD3002-20209 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20209; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20196 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20196 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20196; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20196 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20196; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20196 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20196; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20196 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20196; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20196; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268405
sample_title: CNTO1275CRD3002-20196 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20196; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20441 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20441 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20441; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20441 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20441; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20441 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20441; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20441 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20441; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20441; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268406
sample_title: CNTO1275CRD3002-20441 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20441; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20685 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20685 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20685; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20685 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20685; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20685 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20685; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20685 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20685; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20685; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268407
sample_title: CNTO1275CRD3002-20685 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20685; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20851 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20851 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20851; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20851 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20851; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20851 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20851; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20851 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20851; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20851; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268408
sample_title: CNTO1275CRD3002-20851 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20851; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20930 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20930 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20930; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20930 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20930; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20930 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20930; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20930 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20930; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20930; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268409
sample_title: CNTO1275CRD3002-20930 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20930; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20616 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20616 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20616; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20616 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20616; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20616 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20616; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20616 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20616; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20616; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268410
sample_title: CNTO1275CRD3002-20616 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20616; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20149 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20149 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20149; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20149 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20149; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20149 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20149; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20149 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20149; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20149; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268411
sample_title: CNTO1275CRD3002-20149 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20149; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20171 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20171 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20171; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20171 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20171; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20171 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20171; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20171 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20171; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20171; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268412
sample_title: CNTO1275CRD3002-20171 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20171; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20106 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20106 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20106; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20106 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20106; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20106 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20106; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20106 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20106; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20106; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268413
sample_title: CNTO1275CRD3002-20106 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20106; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20682 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20682 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20682; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20682 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20682; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20682 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20682; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20682 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20682; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20682; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268414
sample_title: CNTO1275CRD3002-20682 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20682; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20843 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20843 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20843; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20843 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20843; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20843 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20843; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20843 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20843; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20843; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268415
sample_title: CNTO1275CRD3002-20843 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20843; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20963 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20963 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20963; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20963 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20963; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20963 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20963; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20963 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20963; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20963; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268416
sample_title: CNTO1275CRD3002-20963 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20963; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20548 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20548 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20548; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20548 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20548; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20548 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20548; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20548 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20548; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20548; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268417
sample_title: CNTO1275CRD3002-20548 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20548; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20673 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20673 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20673; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20673 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20673; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20673 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20673; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20673 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20673; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20673; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268418
sample_title: CNTO1275CRD3002-20673 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20673; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20978 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20978 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20978; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20978 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20978; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20978 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20978; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20978 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20978; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20978; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268419
sample_title: CNTO1275CRD3002-20978 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20978; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20542 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20542 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20542; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20542 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20542; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20542 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20542; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20542 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20542; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20542; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268420
sample_title: CNTO1275CRD3002-20542 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20542; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20133 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20133 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20133; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20133 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20133; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20133 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20133; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20133 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20133; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20133; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268421
sample_title: CNTO1275CRD3002-20133 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20133; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20286 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20286 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20286; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20286 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20286; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20286 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20286; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20286 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20286; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20286; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268422
sample_title: CNTO1275CRD3002-20286 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20286; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20863 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20863 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20863; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20863 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20863; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20863 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20863; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20863 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20863; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20863; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268423
sample_title: CNTO1275CRD3002-20863 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20863; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
CNTO1275CRD3002-20484 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20484 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20484; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20484 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20484; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20484 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20484; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20484 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20484; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20484; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268424
sample_title: CNTO1275CRD3002-20484 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20484; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20058 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20058 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20058; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20058 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20058; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20058 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20058; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20058 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20058; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20058; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268425
sample_title: CNTO1275CRD3002-20058 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20058; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20004 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20004 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20004; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20004 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20004; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20004 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20004; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20004 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20004; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20004; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268426
sample_title: CNTO1275CRD3002-20004 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20004; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20155 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20155 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20155; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20155 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20155; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20155 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20155; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20155 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20155; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20155; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268427
sample_title: CNTO1275CRD3002-20155 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20155; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20814 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20814 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20814; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20814 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20814; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20814 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20814; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20814 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20814; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20814; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268428
sample_title: CNTO1275CRD3002-20814 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20814; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20429 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20429 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20429; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20429 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20429; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20429 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20429; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20429 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20429; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20429; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268429
sample_title: CNTO1275CRD3002-20429 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20429; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20986 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20986 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20986; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20986 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20986; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20986 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20986; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20986 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20986; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20986; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268430
sample_title: CNTO1275CRD3002-20986 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20986; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20116 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20116 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20116; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20116 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20116; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20116 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20116; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20116 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20116; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20116; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268431
sample_title: CNTO1275CRD3002-20116 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20116; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20047 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20047 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20047; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20047 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20047; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20047 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20047; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20047 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20047; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20047; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268432
sample_title: CNTO1275CRD3002-20047 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20047; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20021 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20021 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20021; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20021 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20021; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20021 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20021; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20021 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20021; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20021; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268433
sample_title: CNTO1275CRD3002-20021 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20021; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20894 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20894 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20894; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20894 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20894; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20894 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20894; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20894 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20894; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20894; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268434
sample_title: CNTO1275CRD3002-20894 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20894; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20009 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20009 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20009; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20009 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20009; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20009 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20009; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20009 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20009; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20009; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268435
sample_title: CNTO1275CRD3002-20009 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20009; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20541 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20541 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20541; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20541 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20541; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20541 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20541; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20541 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20541; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20541; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268436
sample_title: CNTO1275CRD3002-20541 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20541; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20757 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20757 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20757; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20757 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20757; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20757 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20757; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20757 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20757; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20757; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268437
sample_title: CNTO1275CRD3002-20757 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20757; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20187 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20187 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20187; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20187 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20187; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20187 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20187; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20187 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20187; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20187; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268438
sample_title: CNTO1275CRD3002-20187 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20187; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20176 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20176 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20176; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20176 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20176; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20176 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20176; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20176 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20176; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20176; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268439
sample_title: CNTO1275CRD3002-20176 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20176; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20878 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20878 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20878; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20878 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20878; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20878 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20878; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20878 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20878; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20878; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268440
sample_title: CNTO1275CRD3002-20878 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20878; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: NA
CNTO1275CRD3002-20805 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20805 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20805; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20805 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20805; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20805 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20805; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20805 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20805; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20805; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268441
sample_title: CNTO1275CRD3002-20805 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20805; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20529 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20529 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20529; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20529 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20529; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20529 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20529; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20529 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20529; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20529; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268442
sample_title: CNTO1275CRD3002-20529 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20529; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20621 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20621 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20621; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20621 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20621; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20621 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20621; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20621 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20621; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20621; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268443
sample_title: CNTO1275CRD3002-20621 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20621; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20345 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20345 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20345; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20345 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20345; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20345 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20345; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20345 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20345; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20345; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268444
sample_title: CNTO1275CRD3002-20345 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20345; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20504 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20504 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20504; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20504 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20504; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20504 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20504; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20504 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20504; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20504; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268445
sample_title: CNTO1275CRD3002-20504 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20504; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20279 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20279 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20279; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20279 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20279; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20279 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20279; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20279 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20279; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20279; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268446
sample_title: CNTO1275CRD3002-20279 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20279; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20182 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20182 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20182; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20182 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20182; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20182 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20182; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20182 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20182; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20182; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268447
sample_title: CNTO1275CRD3002-20182 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20182; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20798 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20798 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20798; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20798 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20798; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20798 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20798; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20798 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20798; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20798; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268448
sample_title: CNTO1275CRD3002-20798 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20798; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20623 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20623 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20623; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20623 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20623; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20623 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20623; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20623 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20623; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20623; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268449
sample_title: CNTO1275CRD3002-20623 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20623; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20104 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20104 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20104; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20104 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20104; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20104 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20104; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20104 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20104; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20104; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268450
sample_title: CNTO1275CRD3002-20104 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20104; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20244 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20244 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20244; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20244 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20244; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20244 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20244; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20244 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20244; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20244; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268451
sample_title: CNTO1275CRD3002-20244 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20244; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20219 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20219 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20219; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20219 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20219; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20219 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20219; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20219 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20219; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20219; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268452
sample_title: CNTO1275CRD3002-20219 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20219; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: NA
CNTO1275CRD3002-20082 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20082 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20082; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20082 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20082; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20082 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20082; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20082 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20082; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20082; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268453
sample_title: CNTO1275CRD3002-20082 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20082; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: NA
CNTO1275CRD3002-20215 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20215 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20215; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20215 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20215; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20215 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20215; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20215 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20215; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20215; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268454
sample_title: CNTO1275CRD3002-20215 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20215; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20304 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20304 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20304; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20304 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20304; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20304 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20304; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20304 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20304; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20304; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268455
sample_title: CNTO1275CRD3002-20304 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20304; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20329 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20329 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20329; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20329 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20329; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20329 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20329; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20329 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20329; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20329; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268456
sample_title: CNTO1275CRD3002-20329 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20329; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20231 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20231 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20231; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20231 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20231; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20231 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20231; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20231 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20231; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20231; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268457
sample_title: CNTO1275CRD3002-20231 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20231; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20678 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20678 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20678; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20678 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20678; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20678 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20678; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20678 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20678; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20678; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268458
sample_title: CNTO1275CRD3002-20678 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20678; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20217 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20217 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20217; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20217 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20217; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20217 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20217; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20217 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20217; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20217; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268459
sample_title: CNTO1275CRD3002-20217 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20217; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: Y
CNTO1275CRD3002-20656 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20656 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20656; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20656 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20656; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20656 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20656; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20656 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20656; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20656; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268460
sample_title: CNTO1275CRD3002-20656 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20656; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20865 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20865 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20865; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20865 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20865; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20865 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20865; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20865 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20865; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20865; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268461
sample_title: CNTO1275CRD3002-20865 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20865; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20848 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20848 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20848; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20848 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20848; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20848 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20848; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20848 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20848; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20848; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268462
sample_title: CNTO1275CRD3002-20848 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20848; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20087 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20087 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20087; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20087 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20087; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20087 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20087; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20087 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20087; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20087; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268463
sample_title: CNTO1275CRD3002-20087 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20087; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20732 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20732 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20732; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20732 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20732; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20732 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20732; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20732 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20732; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20732; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268464
sample_title: CNTO1275CRD3002-20732 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20732; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: Y
CNTO1275CRD3002-21011 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21011 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21011; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-21011 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21011; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21011 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21011; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-21011 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21011; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-21011; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268465
sample_title: CNTO1275CRD3002-21011 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-21011; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20781 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20781 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20781; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20781 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20781; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20781 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20781; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20781 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20781; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20781; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268466
sample_title: CNTO1275CRD3002-20781 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20781; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20438 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20438 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20438; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20438 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20438; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20438 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20438; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20438 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20438; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20438; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268467
sample_title: CNTO1275CRD3002-20438 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20438; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20245 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20245 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20245; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20245 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20245; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20245 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20245; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20245 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20245; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20245; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268468
sample_title: CNTO1275CRD3002-20245 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20245; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20198 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20198 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20198; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20198 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20198; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20198 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20198; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20198 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20198; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20198; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268469
sample_title: CNTO1275CRD3002-20198 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20198; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20459 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20459 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20459; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20459 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20459; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20459 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20459; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20459 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20459; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20459; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268470
sample_title: CNTO1275CRD3002-20459 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20459; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-21043 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21043 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21043; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-21043 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21043; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21043 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21043; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-21043 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21043; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-21043; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268471
sample_title: CNTO1275CRD3002-21043 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-21043; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20604 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20604 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20604; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20604 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20604; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20604 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20604; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20604 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20604; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20604; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268472
sample_title: CNTO1275CRD3002-20604 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20604; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20969 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20969 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20969; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20969 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20969; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20969 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20969; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20969 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20969; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20969; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268473
sample_title: CNTO1275CRD3002-20969 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20969; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20962 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20962 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20962; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20962 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20962; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20962 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20962; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20962 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20962; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20962; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268474
sample_title: CNTO1275CRD3002-20962 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20962; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20637 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20637 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20637; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20637 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20637; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20637 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20637; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20637 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20637; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20637; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268475
sample_title: CNTO1275CRD3002-20637 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20637; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20559 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20559 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20559; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20559 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20559; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20559 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20559; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20559 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20559; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20559; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268476
sample_title: CNTO1275CRD3002-20559 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20559; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20051 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20051 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20051; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20051 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20051; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20051 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20051; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20051 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20051; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20051; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268477
sample_title: CNTO1275CRD3002-20051 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20051; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20531 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20531 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20531; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20531 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20531; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20531 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20531; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20531 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20531; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20531; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268478
sample_title: CNTO1275CRD3002-20531 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20531; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20432 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20432 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20432; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20432 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20432; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20432 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20432; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20432 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20432; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20432; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268479
sample_title: CNTO1275CRD3002-20432 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20432; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20481 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20481 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20481; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20481 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20481; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20481 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20481; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20481 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20481; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20481; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268480
sample_title: CNTO1275CRD3002-20481 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20481; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20290 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20290 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20290; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20290 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20290; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20290 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20290; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20290 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20290; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20290; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268481
sample_title: CNTO1275CRD3002-20290 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20290; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-21032 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21032 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21032; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-21032 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21032; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21032 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21032; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-21032 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21032; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-21032; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268482
sample_title: CNTO1275CRD3002-21032 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-21032; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20971 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20971 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20971; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20971 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20971; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20971 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20971; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20971 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20971; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20971; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268483
sample_title: CNTO1275CRD3002-20971 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20971; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20791 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20791 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20791; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20791 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20791; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20791 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20791; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20791 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20791; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20791; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268484
sample_title: CNTO1275CRD3002-20791 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20791; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20148 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20148 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20148; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20148 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20148; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20148 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20148; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20148 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20148; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20148; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268485
sample_title: CNTO1275CRD3002-20148 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20148; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20547 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20547 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20547; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20547 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20547; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20547 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20547; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20547 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20547; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20547; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268486
sample_title: CNTO1275CRD3002-20547 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20547; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20980 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20980 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20980; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20980 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20980; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20980 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20980; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20980 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20980; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20980; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268487
sample_title: CNTO1275CRD3002-20980 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20980; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20472 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20472 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20472; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20472 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20472; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20472 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20472; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20472 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20472; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20472; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268488
sample_title: CNTO1275CRD3002-20472 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20472; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20922 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20922 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20922; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20922 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20922; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20922 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20922; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20922 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20922; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20922; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268489
sample_title: CNTO1275CRD3002-20922 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20922; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20653 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20653 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20653; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20653 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20653; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20653 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20653; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20653 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20653; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20653; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268490
sample_title: CNTO1275CRD3002-20653 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20653; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20367 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20367 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20367; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20367 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20367; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20367 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20367; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20367 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20367; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20367; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268491
sample_title: CNTO1275CRD3002-20367 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20367; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20783 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20783 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20783; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20783 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20783; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20783 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20783; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20783 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20783; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20783; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268492
sample_title: CNTO1275CRD3002-20783 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20783; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20886 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20886 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20886; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20886 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20886; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20886 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20886; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20886 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20886; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20886; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268493
sample_title: CNTO1275CRD3002-20886 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20886; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-21035 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21035 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21035; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-21035 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21035; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21035 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21035; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-21035 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21035; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-21035; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268494
sample_title: CNTO1275CRD3002-21035 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-21035; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20514 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20514 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20514; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20514 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20514; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20514 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20514; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20514 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20514; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20514; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268495
sample_title: CNTO1275CRD3002-20514 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20514; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20295 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20295 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20295; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20295 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20295; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20295 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20295; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20295 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20295; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20295; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268496
sample_title: CNTO1275CRD3002-20295 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20295; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20838 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20838 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20838; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20838 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20838; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20838 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20838; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20838 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20838; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20838; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268497
sample_title: CNTO1275CRD3002-20838 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20838; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: Y
CNTO1275CRD3002-20292 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20292 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20292; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20292 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20292; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20292 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20292; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20292 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20292; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20292; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268498
sample_title: CNTO1275CRD3002-20292 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20292; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20959 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20959 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20959; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20959 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20959; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20959 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20959; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20959 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20959; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20959; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268499
sample_title: CNTO1275CRD3002-20959 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20959; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20928 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20928 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20928; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20928 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20928; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20928 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20928; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20928 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20928; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20928; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268500
sample_title: CNTO1275CRD3002-20928 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20928; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20829 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20829 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20829; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20829 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20829; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20829 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20829; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20829 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20829; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20829; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268501
sample_title: CNTO1275CRD3002-20829 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20829; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20929 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20929 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20929; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20929 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20929; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20929 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20929; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20929 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20929; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20929; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268502
sample_title: CNTO1275CRD3002-20929 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20929; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (520 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-20937 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20937 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20937; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20937 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20937; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20937 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20937; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20937 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20937; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20937; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268503
sample_title: CNTO1275CRD3002-20937 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20937; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
CNTO1275CRD3002-20681 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20681 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20681; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20681 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20681; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20681 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20681; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20681 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20681; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20681; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268504
sample_title: CNTO1275CRD3002-20681 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20681; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-21019 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21019 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21019; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-21019 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21019; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21019 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21019; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-21019 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21019; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-21019; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268505
sample_title: CNTO1275CRD3002-21019 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-21019; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: NA
CNTO1275CRD3002-21010 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21010 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21010; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-21010 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21010; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21010 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21010; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-21010 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21010; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-21010; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268506
sample_title: CNTO1275CRD3002-21010 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-21010; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-21016 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21016 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21016; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-21016 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21016; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-21016 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21016; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-21016 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-21016; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-21016; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268507
sample_title: CNTO1275CRD3002-21016 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-21016; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20151 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20151 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20151; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20151 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20151; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20151 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20151; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20151 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20151; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20151; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268508
sample_title: CNTO1275CRD3002-20151 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20151; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
CNTO1275CRD3002-20194 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20194 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20194; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20194 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20194; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20194 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20194; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20194 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20194; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20194; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268509
sample_title: CNTO1275CRD3002-20194 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20194; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
CNTO1275CRD3002-20170 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20170 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20170; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20170 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20170; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20170 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20170; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20170 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20170; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20170; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268510
sample_title: CNTO1275CRD3002-20170 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20170; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: NA
CNTO1275CRD3002-20404 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20404 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20404; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20404 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20404; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20404 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20404; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20404 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20404; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20404; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268511
sample_title: CNTO1275CRD3002-20404 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20404; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (390 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20237 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20237 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20237; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20237 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20237; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20237 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20237; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
- CNTO1275CRD3002-20237 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20237; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/k...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20237; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268512
sample_title: CNTO1275CRD3002-20237 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20237; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 6 mg/kg (260 mg); inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20358 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20358 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20358; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20358 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20358; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20358 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20358; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
- CNTO1275CRD3002-20358 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20358; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflam...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20358; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268513
sample_title: CNTO1275CRD3002-20358 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20358; visit: I-WK0; diagnosis: Crohn's disease; treatment: Placebo IV; inflamed area at week 0: Ileum and colon; mucosal healing at week 8: N
CNTO1275CRD3002-20675 rectum biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20675 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20675; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20675 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20675; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO1275CRD3002-20675 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20675; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
- CNTO1275CRD3002-20675 rectum biopsy week 0 rectum biopsy tissue: rectum; donor id: CNTO1275CRD3002-20675; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg...
Source metadata
- Source name
- rectum biopsy
- Characteristics
- tissue: rectum; donor id: CNTO1275CRD3002-20675; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6268514
sample_title: CNTO1275CRD3002-20675 rectum biopsy week 0
source_name: rectum biopsy
characteristics: tissue: rectum; donor id: CNTO1275CRD3002-20675; visit: I-WK0; diagnosis: Crohn's disease; treatment: Ustekinumab 130 mg IV; inflamed area at week 0: Colon only; mucosal healing at week 8: N