These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.
CNTO148UCO2001-100002 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100002 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100002; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100002 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100002; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100002 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100002; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100002 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100002; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100002; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557038
sample_title: CNTO148UCO2001-100002 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100002; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100003 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100003 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100003; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100003 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100003; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100003 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100003; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100003 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100003; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100003; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557039
sample_title: CNTO148UCO2001-100003 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100003; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100007 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100007 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100007; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100007 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100007; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100007 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100007; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100007 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100007; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100007; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557041
sample_title: CNTO148UCO2001-100007 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100007; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100009 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100009 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100009; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100009 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100009; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100009 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100009; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100009 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100009; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100009; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557042
sample_title: CNTO148UCO2001-100009 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100009; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100010 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100010 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100010; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100010 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100010; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100010 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100010; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100010 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100010; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100010; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557044
sample_title: CNTO148UCO2001-100010 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100010; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100012 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100012 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100012; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100012 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100012; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100012 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100012; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100012 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100012; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100012; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557045
sample_title: CNTO148UCO2001-100012 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100012; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100017 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100017 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100017; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100017 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100017; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100017 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100017; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100017 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100017; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100017; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557047
sample_title: CNTO148UCO2001-100017 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100017; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100019 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100019 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100019; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100019 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100019; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100019 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100019; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100019 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100019; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100019; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557048
sample_title: CNTO148UCO2001-100019 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100019; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100020 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100020 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100020; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100020 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100020; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100020 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100020; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100020 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100020; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100020; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557049
sample_title: CNTO148UCO2001-100020 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100020; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100021 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100021 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100021; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100021 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100021; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100021 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100021; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100021 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100021; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100021; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557051
sample_title: CNTO148UCO2001-100021 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100021; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100027 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100027 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100027; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100027 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100027; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100027 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100027; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100027 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100027; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100027; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557052
sample_title: CNTO148UCO2001-100027 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100027; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100028 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100028 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100028; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100028 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100028; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100028 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100028; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100028 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100028; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100028; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557054
sample_title: CNTO148UCO2001-100028 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100028; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100029 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100029 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100029; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100029 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100029; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100029 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100029; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100029 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100029; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100029; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557055
sample_title: CNTO148UCO2001-100029 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100029; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100030 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100030 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100030; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100030 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100030; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100030 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100030; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100030 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100030; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100030; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557057
sample_title: CNTO148UCO2001-100030 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100030; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100032 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100032 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100032; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100032 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100032; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100032 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100032; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100032 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100032; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100032; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557058
sample_title: CNTO148UCO2001-100032 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100032; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100033 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100033 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100033; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100033 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100033; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100033 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100033; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100033 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100033; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100033; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557059
sample_title: CNTO148UCO2001-100033 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100033; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100035 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100035 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100035; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100035 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100035; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100035 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100035; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100035 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100035; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100035; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557061
sample_title: CNTO148UCO2001-100035 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100035; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100036 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100036 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100036; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100036 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100036; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100036 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100036; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100036 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100036; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100036; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557062
sample_title: CNTO148UCO2001-100036 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100036; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100038 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100038 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100038; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100038 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100038; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100038 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100038; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100038 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100038; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100038; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557063
sample_title: CNTO148UCO2001-100038 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100038; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100042 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100042 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100042; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100042 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100042; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100042 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100042; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100042 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100042; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100042; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557065
sample_title: CNTO148UCO2001-100042 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100042; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100045 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100045 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100045; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100045 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100045; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100045 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100045; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100045 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100045; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100045; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557066
sample_title: CNTO148UCO2001-100045 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100045; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100046 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100046 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100046; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100046 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100046; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100046 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100046; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100046 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100046; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100046; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557068
sample_title: CNTO148UCO2001-100046 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100046; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100047 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100047 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100047; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100047 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100047; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100047 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100047; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100047 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100047; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100047; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557069
sample_title: CNTO148UCO2001-100047 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100047; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100050 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100050 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100050; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100050 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100050; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100050 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100050; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100050 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100050; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100050; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557071
sample_title: CNTO148UCO2001-100050 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100050; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100051 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100051 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100051; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100051 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100051; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100051 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100051; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100051 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100051; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100051; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557072
sample_title: CNTO148UCO2001-100051 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100051; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100052 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100052 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100052; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100052 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100052; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100052 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100052; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100052 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100052; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100052; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557074
sample_title: CNTO148UCO2001-100052 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100052; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100053 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100053 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100053; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100053 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100053; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100053 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100053; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100053 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100053; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100053; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557075
sample_title: CNTO148UCO2001-100053 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100053; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100054 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100054 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100054; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100054 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100054; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100054 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100054; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100054 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100054; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100054; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557076
sample_title: CNTO148UCO2001-100054 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100054; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100058 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100058 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100058; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100058 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100058; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100058 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100058; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100058 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100058; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100058; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557078
sample_title: CNTO148UCO2001-100058 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100058; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100062 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100062 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100062; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100062 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100062; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100062 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100062; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100062 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100062; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100062; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557079
sample_title: CNTO148UCO2001-100062 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100062; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100064 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100064 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100064; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100064 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100064; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100064 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100064; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100064 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100064; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100064; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557080
sample_title: CNTO148UCO2001-100064 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100064; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100065 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100065 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100065; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100065 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100065; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100065 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100065; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100065 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100065; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100065; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557082
sample_title: CNTO148UCO2001-100065 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100065; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100066 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100066 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100066; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100066 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100066; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100066 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100066; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100066 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100066; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100066; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557083
sample_title: CNTO148UCO2001-100066 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100066; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100067 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100067 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100067; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100067 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100067; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100067 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100067; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100067 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100067; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100067; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557084
sample_title: CNTO148UCO2001-100067 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100067; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100070 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100070 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100070; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100070 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100070; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100070 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100070; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100070 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100070; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100070; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557086
sample_title: CNTO148UCO2001-100070 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100070; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100076 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100076 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100076; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100076 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100076; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100076 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100076; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100076 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100076; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100076; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557087
sample_title: CNTO148UCO2001-100076 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100076; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100077 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100077 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100077; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100077 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100077; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100077 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100077; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100077 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100077; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100077; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557089
sample_title: CNTO148UCO2001-100077 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100077; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100078 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100078 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100078; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100078 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100078; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100078 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100078; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100078 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100078; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100078; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557090
sample_title: CNTO148UCO2001-100078 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100078; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100079 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100079 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100079; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100079 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100079; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100079 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100079; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100079 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100079; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100079; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557092
sample_title: CNTO148UCO2001-100079 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100079; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100080 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100080 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100080; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100080 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100080; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100080 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100080; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100080 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100080; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100080; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557093
sample_title: CNTO148UCO2001-100080 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100080; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100081 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100081 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100081; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100081 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100081; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100081 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100081; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100081 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100081; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100081; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557094
sample_title: CNTO148UCO2001-100081 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100081; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100082 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100082 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100082; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100082 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100082; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100082 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100082; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100082 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100082; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100082; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557096
sample_title: CNTO148UCO2001-100082 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100082; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100084 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100084 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100084; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100084 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100084; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100084 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100084; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100084 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100084; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100084; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557097
sample_title: CNTO148UCO2001-100084 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100084; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100085 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100085 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100085; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100085 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100085; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100085 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100085; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100085 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100085; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100085; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557098
sample_title: CNTO148UCO2001-100085 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100085; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100086 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100086 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100086; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100086 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100086; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100086 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100086; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100086 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100086; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100086; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557100
sample_title: CNTO148UCO2001-100086 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100086; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100089 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100089 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100089; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100089 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100089; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100089 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100089; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100089 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100089; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100089; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557101
sample_title: CNTO148UCO2001-100089 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100089; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100091 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100091 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100091; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100091 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100091; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100091 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100091; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100091 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100091; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100091; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557102
sample_title: CNTO148UCO2001-100091 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100091; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100092 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100092 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100092; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100092 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100092; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100092 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100092; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100092 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100092; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100092; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557104
sample_title: CNTO148UCO2001-100092 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100092; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100095 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100095 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100095; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100095 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100095; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100095 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100095; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100095 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100095; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100095; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557105
sample_title: CNTO148UCO2001-100095 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100095; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100097 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100097 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100097; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100097 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100097; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100097 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100097; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100097 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100097; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100097; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557106
sample_title: CNTO148UCO2001-100097 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100097; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100099 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100099 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100099; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100099 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100099; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100099 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100099; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100099 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100099; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100099; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557108
sample_title: CNTO148UCO2001-100099 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100099; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100100 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100100 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100100; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100100 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100100; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100100 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100100; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100100 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100100; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100100; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557109
sample_title: CNTO148UCO2001-100100 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100100; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100102 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100102 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100102; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100102 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100102; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100102 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100102; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100102 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100102; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100102; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557110
sample_title: CNTO148UCO2001-100102 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100102; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100103 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100103 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100103; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100103 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100103; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100103 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100103; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100103 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100103; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100103; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557112
sample_title: CNTO148UCO2001-100103 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100103; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100104 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100104 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100104; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100104 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100104; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100104 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100104; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100104 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100104; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100104; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557113
sample_title: CNTO148UCO2001-100104 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100104; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100105 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100105 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100105; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100105 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100105; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100105 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100105; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100105 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100105; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100105; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557115
sample_title: CNTO148UCO2001-100105 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100105; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100107 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100107 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100107; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100107 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100107; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100107 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100107; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100107 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100107; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100107; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557116
sample_title: CNTO148UCO2001-100107 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100107; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100111 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100111 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100111; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100111 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100111; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100111 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100111; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100111 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100111; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100111; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557118
sample_title: CNTO148UCO2001-100111 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100111; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100112 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100112 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100112; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100112 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100112; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100112 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100112; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100112 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100112; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100112; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557119
sample_title: CNTO148UCO2001-100112 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100112; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100114 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100114 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100114; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100114 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100114; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100114 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100114; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100114 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100114; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100114; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557120
sample_title: CNTO148UCO2001-100114 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100114; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100116 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100116 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100116; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100116 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100116; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100116 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100116; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100116 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100116; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100116; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557122
sample_title: CNTO148UCO2001-100116 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100116; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100117 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100117 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100117; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100117 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100117; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100117 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100117; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100117 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100117; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100117; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557123
sample_title: CNTO148UCO2001-100117 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100117; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100119 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100119 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100119; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100119 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100119; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100119 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100119; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100119 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100119; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100119; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557124
sample_title: CNTO148UCO2001-100119 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100119; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100120 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100120 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100120; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100120 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100120; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100120 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100120; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100120 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100120; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100120; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557126
sample_title: CNTO148UCO2001-100120 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100120; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100121 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100121 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100121; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100121 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100121; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100121 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100121; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100121 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100121; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100121; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557127
sample_title: CNTO148UCO2001-100121 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100121; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: Y
CNTO148UCO2001-100123 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100123 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100123; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100123 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100123; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100123 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100123; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100123 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100123; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100123; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557128
sample_title: CNTO148UCO2001-100123 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100123; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100126 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100126 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100126; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100126 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100126; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100126 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100126; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100126 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100126; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100126; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557130
sample_title: CNTO148UCO2001-100126 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100126; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100131 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100131 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100131; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100131 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100131; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100131 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100131; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100131 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100131; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100131; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557131
sample_title: CNTO148UCO2001-100131 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100131; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100132 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100132 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100132; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100132 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100132; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100132 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100132; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100132 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100132; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100132; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557132
sample_title: CNTO148UCO2001-100132 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100132; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100134 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100134 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100134; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100134 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100134; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100134 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100134; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100134 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100134; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100134; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557134
sample_title: CNTO148UCO2001-100134 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100134; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
CNTO148UCO2001-100139 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100139 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100139; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100139 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100139; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100139 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100139; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100139 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100139; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100139; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557135
sample_title: CNTO148UCO2001-100139 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100139; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100146 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100146 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100146; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100146 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100146; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100146 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100146; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100146 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100146; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100146; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557136
sample_title: CNTO148UCO2001-100146 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100146; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100150 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100150 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100150; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100150 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100150; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100150 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100150; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100150 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100150; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100150; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557138
sample_title: CNTO148UCO2001-100150 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100150; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100151 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100151 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100151; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100151 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100151; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100151 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100151; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100151 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100151; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100151; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557139
sample_title: CNTO148UCO2001-100151 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100151; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100152 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100152 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100152; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100152 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100152; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100152 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100152; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100152 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100152; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100152; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557141
sample_title: CNTO148UCO2001-100152 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100152; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100154 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100154 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100154; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100154 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100154; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100154 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100154; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100154 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100154; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100154; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557142
sample_title: CNTO148UCO2001-100154 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100154; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100158 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100158 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100158; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100158 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100158; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100158 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100158; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100158 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100158; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100158; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557144
sample_title: CNTO148UCO2001-100158 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100158; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100160 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100160 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100160; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100160 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100160; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100160 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100160; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100160 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100160; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100160; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557145
sample_title: CNTO148UCO2001-100160 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100160; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100161 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100161 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100161; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100161 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100161; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100161 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100161; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100161 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100161; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100161; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557147
sample_title: CNTO148UCO2001-100161 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100161; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100162 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100162 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100162; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100162 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100162; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100162 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100162; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100162 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100162; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100162; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557148
sample_title: CNTO148UCO2001-100162 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100162; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100163 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100163 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100163; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100163 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100163; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100163 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100163; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100163 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100163; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100163; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557149
sample_title: CNTO148UCO2001-100163 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100163; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100164 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100164 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100164; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100164 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100164; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100164 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100164; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100164 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100164; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100164; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557151
sample_title: CNTO148UCO2001-100164 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100164; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100167 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100167 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100167; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100167 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100167; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100167 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100167; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100167 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100167; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100167; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557152
sample_title: CNTO148UCO2001-100167 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100167; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: N; clinical remission at week 6: N
CNTO148UCO2001-100168 colon biopsy week 0
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100168 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100168; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100168 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100168; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CNTO148UCO2001-100168 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100168; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
- CNTO148UCO2001-100168 colon biopsy week 0 colon biopsy tissue: colon; donor id: CNTO148UCO2001-100168; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; ...
Source metadata
- Source name
- colon biopsy
- Characteristics
- tissue: colon; donor id: CNTO148UCO2001-100168; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6557153
sample_title: CNTO148UCO2001-100168 colon biopsy week 0
source_name: colon biopsy
characteristics: tissue: colon; donor id: CNTO148UCO2001-100168; visit: week 0; diagnosis: ulcerative colitis; treatment: golimumab 200mg; mucosal healing at week 6: Y; clinical remission at week 6: N