These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.
Duodenum-05
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Duodenum
- Characteristics
- disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 44; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631159
sample_title: Duodenum-05
source_name: Duodenum
characteristics: disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 44; Sex: female; race: Japanese
Duodenum-06
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Duodenum
- Characteristics
- disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 70; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631160
sample_title: Duodenum-06
source_name: Duodenum
characteristics: disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 70; Sex: female; race: Japanese
Duodenum-09
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Duodenum
- Characteristics
- disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 26; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631161
sample_title: Duodenum-09
source_name: Duodenum
characteristics: disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 26; Sex: female; race: Japanese
Duodenum-10
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Duodenum
- Characteristics
- disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 74; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631162
sample_title: Duodenum-10
source_name: Duodenum
characteristics: disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 74; Sex: male; race: Japanese
Rectum-04
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Rectum
- Characteristics
- disease state: non; tissue: Rectum; sampling region: non-inflammatory area; age: 72; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631163
sample_title: Rectum-04
source_name: Rectum
characteristics: disease state: non; tissue: Rectum; sampling region: non-inflammatory area; age: 72; Sex: male; race: Japanese
Colon-13
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: non; tissue: Colon; sampling region: non-inflammatory area; age: 71; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631164
sample_title: Colon-13
source_name: Colon
characteristics: disease state: non; tissue: Colon; sampling region: non-inflammatory area; age: 71; Sex: female; race: Japanese
Duodenum-12
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Duodenum
- Characteristics
- disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 20; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631165
sample_title: Duodenum-12
source_name: Duodenum
characteristics: disease state: non; tissue: Duodenum; sampling region: non-inflammatory area; age: 20; Sex: male; race: Japanese
Ileum-05
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Ileum
- Characteristics
- disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 61; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631166
sample_title: Ileum-05
source_name: Ileum
characteristics: disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 61; Sex: male; race: Japanese
Colon-07
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 61; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631167
sample_title: Colon-07
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 61; Sex: male; race: Japanese
Colon-08
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 34; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631168
sample_title: Colon-08
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 34; Sex: female; race: Japanese
Duodenum-07
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Duodenum
- Characteristics
- disease state: IBD; tissue: Duodenum; sampling region: non-inflammatory area; age: 34; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631169
sample_title: Duodenum-07
source_name: Duodenum
characteristics: disease state: IBD; tissue: Duodenum; sampling region: non-inflammatory area; age: 34; Sex: male; race: Japanese
Ileum-06
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Ileum
- Characteristics
- disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 34; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631170
sample_title: Ileum-06
source_name: Ileum
characteristics: disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 34; Sex: male; race: Japanese
Colon-09
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 34; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631171
sample_title: Colon-09
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 34; Sex: male; race: Japanese
Ileum-07
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Ileum
- Characteristics
- disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 34; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631172
sample_title: Ileum-07
source_name: Ileum
characteristics: disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 34; Sex: male; race: Japanese
Duodenum-11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Duodenum
- Characteristics
- disease state: IBD; tissue: Duodenum; sampling region: non-inflammatory area; age: 31; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631173
sample_title: Duodenum-11
source_name: Duodenum
characteristics: disease state: IBD; tissue: Duodenum; sampling region: non-inflammatory area; age: 31; Sex: male; race: Japanese
Ileum-08
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Ileum
- Characteristics
- disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 62; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631174
sample_title: Ileum-08
source_name: Ileum
characteristics: disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 62; Sex: male; race: Japanese
Rectum-03
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Rectum
- Characteristics
- disease state: IBD; tissue: Rectum; sampling region: non-inflammatory area; age: 62; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631175
sample_title: Rectum-03
source_name: Rectum
characteristics: disease state: IBD; tissue: Rectum; sampling region: non-inflammatory area; age: 62; Sex: male; race: Japanese
Colon-22
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 60; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631176
sample_title: Colon-22
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 60; Sex: female; race: Japanese
Colon-11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 33; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631177
sample_title: Colon-11
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 33; Sex: male; race: Japanese
Colon-12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 59; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631178
sample_title: Colon-12
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 59; Sex: male; race: Japanese
Ileum-09
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Ileum
- Characteristics
- disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 31; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631179
sample_title: Ileum-09
source_name: Ileum
characteristics: disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 31; Sex: male; race: Japanese
Colon-23
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 56; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631180
sample_title: Colon-23
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 56; Sex: male; race: Japanese
Colon-14
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 45; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631181
sample_title: Colon-14
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 45; Sex: female; race: Japanese
Ileum-10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Ileum
- Characteristics
- disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 31; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631182
sample_title: Ileum-10
source_name: Ileum
characteristics: disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 31; Sex: male; race: Japanese
Rectum-05
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Rectum
- Characteristics
- disease state: IBD; tissue: Rectum; sampling region: non-inflammatory area; age: 31; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631183
sample_title: Rectum-05
source_name: Rectum
characteristics: disease state: IBD; tissue: Rectum; sampling region: non-inflammatory area; age: 31; Sex: male; race: Japanese
Colon-15
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: non; tissue: Colon; sampling region: non-inflammatory area; age: 43; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631184
sample_title: Colon-15
source_name: Colon
characteristics: disease state: non; tissue: Colon; sampling region: non-inflammatory area; age: 43; Sex: female; race: Japanese
Colon-16
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 22; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631185
sample_title: Colon-16
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 22; Sex: female; race: Japanese
Colon-17
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 21; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631186
sample_title: Colon-17
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 21; Sex: female; race: Japanese
Colon-18
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: non; tissue: Colon; sampling region: non-inflammatory area; age: 63; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631187
sample_title: Colon-18
source_name: Colon
characteristics: disease state: non; tissue: Colon; sampling region: non-inflammatory area; age: 63; Sex: male; race: Japanese
Colon-19
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 57; Sex: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631188
sample_title: Colon-19
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 57; Sex: female; race: Japanese
Ileum-01
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Ileum
- Characteristics
- disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 26; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631189
sample_title: Ileum-01
source_name: Ileum
characteristics: disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 26; Sex: male; race: Japanese
Colon-01
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 26; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631190
sample_title: Colon-01
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 26; Sex: male; race: Japanese
Jejunum-01
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Jejunum
- Characteristics
- disease state: non; tissue: Jejunum; sampling region: non-inflammatory area; age: 78; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631191
sample_title: Jejunum-01
source_name: Jejunum
characteristics: disease state: non; tissue: Jejunum; sampling region: non-inflammatory area; age: 78; Sex: male; race: Japanese
Colon-20
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 59; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631192
sample_title: Colon-20
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 59; Sex: male; race: Japanese
Colon-21
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Colon
- Characteristics
- disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 37; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631193
sample_title: Colon-21
source_name: Colon
characteristics: disease state: IBD; tissue: Colon; sampling region: non-inflammatory area; age: 37; Sex: male; race: Japanese
Jejunum-02
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Jejunum
- Characteristics
- disease state: non; tissue: Jejunum; sampling region: non-inflammatory area; age: 61; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631194
sample_title: Jejunum-02
source_name: Jejunum
characteristics: disease state: non; tissue: Jejunum; sampling region: non-inflammatory area; age: 61; Sex: male; race: Japanese
Ileum-11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Ileum
- Characteristics
- disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 48; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631195
sample_title: Ileum-11
source_name: Ileum
characteristics: disease state: IBD; tissue: Ileum; sampling region: non-inflammatory area; age: 48; Sex: male; race: Japanese
Jejunum-03
Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.
Requirements and decision evidence
-
Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Case: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
-
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
Control: specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Jejunum
- Characteristics
- disease state: non; tissue: Jejunum; sampling region: non-inflammatory area; age: 35; Sex: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM6631196
sample_title: Jejunum-03
source_name: Jejunum
characteristics: disease state: non; tissue: Jejunum; sampling region: non-inflammatory area; age: 35; Sex: male; race: Japanese
Ileum-04
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 33; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074267
sample_title: Ileum-04
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 33; genotype: male; race: Japanese
Colon-06
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 33; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074268
sample_title: Colon-06
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 33; genotype: male; race: Japanese
Duodenum-04
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 53; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074269
sample_title: Duodenum-04
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 53; genotype: male; race: Japanese
Ileum-12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 54; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074270
sample_title: Ileum-12
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 54; genotype: male; race: Japanese
Colon-24
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 22; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074271
sample_title: Colon-24
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 22; genotype: male; race: Japanese
Colon-25
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 22; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074272
sample_title: Colon-25
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 22; genotype: male; race: Japanese
Colon-26
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 40; genotype: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074273
sample_title: Colon-26
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 40; genotype: female; race: Japanese
Duodenum-03
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 42; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074274
sample_title: Duodenum-03
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 42; genotype: male; race: Japanese
Duodenum-02
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 54; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074275
sample_title: Duodenum-02
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 54; genotype: male; race: Japanese
Ileum-13
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 26; genotype: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074276
sample_title: Ileum-13
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 26; genotype: female; race: Japanese
Colon-27
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 26; genotype: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074277
sample_title: Colon-27
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 26; genotype: female; race: Japanese
Rectum-02
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 54; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074278
sample_title: Rectum-02
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 54; genotype: male; race: Japanese
Ileum-14
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 51; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074279
sample_title: Ileum-14
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 51; genotype: male; race: Japanese
Colon-02
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 51; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074280
sample_title: Colon-02
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 51; genotype: male; race: Japanese
Rectum-01
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 51; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074281
sample_title: Rectum-01
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 51; genotype: male; race: Japanese
Duodenum-01
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 51; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074282
sample_title: Duodenum-01
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 51; genotype: male; race: Japanese
Colon-03
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 27; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074283
sample_title: Colon-03
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 27; genotype: male; race: Japanese
Ileum-02
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 44; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074284
sample_title: Ileum-02
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 44; genotype: male; race: Japanese
Colon-04
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 44; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074285
sample_title: Colon-04
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 44; genotype: male; race: Japanese
Ileum-03
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 23; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074286
sample_title: Ileum-03
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 23; genotype: male; race: Japanese
Colon-05
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 23; genotype: male; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074287
sample_title: Colon-05
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 23; genotype: male; race: Japanese
Ileum-15
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 29; genotype: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074288
sample_title: Ileum-15
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 29; genotype: female; race: Japanese
Colon-28
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- IBD
- Characteristics
- tissue: IBD; sampling region: non-inflammatory area; age: 29; genotype: female; race: Japanese
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM7074289
sample_title: Colon-28
source_name: IBD
characteristics: tissue: IBD; sampling region: non-inflammatory area; age: 29; genotype: female; race: Japanese