Matching samples

GSE224758 · Gene expression profiling of colon biopsies from ulcerative colitis patients and healthy volunteers

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

16 case / 6 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (22)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM7031376

Uncertain

ulcerative colitis colon biopsy, rep 1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • ulcerative colitis colon biopsy, rep 1 colon tissue: colon; condition: active ulcerative colitis
        • ulcerative colitis colon biopsy, rep 1 colon tissue: colon; condition: active ulcerative colitis
      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • specimen category excludes: Biofluid — Insufficient evidence
          • The required value is not reported.
          • ulcerative colitis colon biopsy, rep 1 colon tissue: colon; condition: active ulcerative colitis
          • ulcerative colitis colon biopsy, rep 1 colon tissue: colon; condition: active ulcerative colitis
        Source metadata
        Source name
        colon
        Characteristics
        tissue: colon; condition: active ulcerative colitis
        Description
        Not reported
        Indexed organism evidence
        INFERRED · PARENT_INHERITED: Not reported
        Indexed assay evidence
        INFERRED · PARENT_INHERITED: Not reported
        Source
        GEO
        Original indexed metadata
        sample_accession: GSM7031376
sample_title: ulcerative colitis colon biopsy, rep 1
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

        GSM7031377

        Uncertain

        ulcerative colitis colon biopsy, rep 2

        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

        Requirements and decision evidence
        • organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • specimen category: Tissue or biopsy — Insufficient evidence
              • The required value is not reported.
              • ulcerative colitis colon biopsy, rep 2 colon tissue: colon; condition: active ulcerative colitis
              • ulcerative colitis colon biopsy, rep 2 colon tissue: colon; condition: active ulcerative colitis
            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • specimen category excludes: Biofluid — Insufficient evidence
                • The required value is not reported.
                • ulcerative colitis colon biopsy, rep 2 colon tissue: colon; condition: active ulcerative colitis
                • ulcerative colitis colon biopsy, rep 2 colon tissue: colon; condition: active ulcerative colitis
              Source metadata
              Source name
              colon
              Characteristics
              tissue: colon; condition: active ulcerative colitis
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM7031377
sample_title: ulcerative colitis colon biopsy, rep 2
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

              GSM7031378

              Uncertain

              ulcerative colitis colon biopsy, rep 3

              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

              Requirements and decision evidence
              • organism: Homo sapiens — Insufficient evidence
                • The required value is not reported.
                • assay type: bulk RNA-seq — Insufficient evidence
                  • The required value is not reported.
                  • specimen category: Tissue or biopsy — Insufficient evidence
                    • The required value is not reported.
                    • ulcerative colitis colon biopsy, rep 3 colon tissue: colon; condition: active ulcerative colitis
                    • ulcerative colitis colon biopsy, rep 3 colon tissue: colon; condition: active ulcerative colitis
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Insufficient evidence
                      • The required value is not reported.
                      • ulcerative colitis colon biopsy, rep 3 colon tissue: colon; condition: active ulcerative colitis
                      • ulcerative colitis colon biopsy, rep 3 colon tissue: colon; condition: active ulcerative colitis
                    Source metadata
                    Source name
                    colon
                    Characteristics
                    tissue: colon; condition: active ulcerative colitis
                    Description
                    Not reported
                    Indexed organism evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Indexed assay evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Source
                    GEO
                    Original indexed metadata
                    sample_accession: GSM7031378
sample_title: ulcerative colitis colon biopsy, rep 3
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                    GSM7031379

                    Uncertain

                    healthy colon biopsy, rep 1

                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                    Requirements and decision evidence
                    • organism: Homo sapiens — Insufficient evidence
                      • The required value is not reported.
                      • assay type: bulk RNA-seq — Insufficient evidence
                        • The required value is not reported.
                        • specimen category: Tissue or biopsy — Insufficient evidence
                          • The required value is not reported.
                          • healthy colon biopsy, rep 1 colon tissue: colon; condition: healthy
                          • healthy colon biopsy, rep 1 colon tissue: colon; condition: healthy
                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                          • Supported by the indexed evidence.
                          • specimen category excludes: Biofluid — Insufficient evidence
                            • The required value is not reported.
                            • healthy colon biopsy, rep 1 colon tissue: colon; condition: healthy
                            • healthy colon biopsy, rep 1 colon tissue: colon; condition: healthy
                          Source metadata
                          Source name
                          colon
                          Characteristics
                          tissue: colon; condition: healthy
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM7031379
sample_title: healthy colon biopsy, rep 1
source_name: colon
characteristics: tissue: colon; condition: healthy

                          GSM7031380

                          Uncertain

                          healthy colon biopsy, rep 2

                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                          Requirements and decision evidence
                          • organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • specimen category: Tissue or biopsy — Insufficient evidence
                                • The required value is not reported.
                                • healthy colon biopsy, rep 2 colon tissue: colon; condition: healthy
                                • healthy colon biopsy, rep 2 colon tissue: colon; condition: healthy
                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                • Supported by the indexed evidence.
                                • specimen category excludes: Biofluid — Insufficient evidence
                                  • The required value is not reported.
                                  • healthy colon biopsy, rep 2 colon tissue: colon; condition: healthy
                                  • healthy colon biopsy, rep 2 colon tissue: colon; condition: healthy
                                Source metadata
                                Source name
                                colon
                                Characteristics
                                tissue: colon; condition: healthy
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM7031380
sample_title: healthy colon biopsy, rep 2
source_name: colon
characteristics: tissue: colon; condition: healthy

                                GSM7031381

                                Uncertain

                                healthy colon biopsy, rep 3

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • healthy colon biopsy, rep 3 colon tissue: colon; condition: healthy
                                      • healthy colon biopsy, rep 3 colon tissue: colon; condition: healthy
                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                      • Supported by the indexed evidence.
                                      • specimen category excludes: Biofluid — Insufficient evidence
                                        • The required value is not reported.
                                        • healthy colon biopsy, rep 3 colon tissue: colon; condition: healthy
                                        • healthy colon biopsy, rep 3 colon tissue: colon; condition: healthy
                                      Source metadata
                                      Source name
                                      colon
                                      Characteristics
                                      tissue: colon; condition: healthy
                                      Description
                                      Not reported
                                      Indexed organism evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Indexed assay evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Source
                                      GEO
                                      Original indexed metadata
                                      sample_accession: GSM7031381
sample_title: healthy colon biopsy, rep 3
source_name: colon
characteristics: tissue: colon; condition: healthy

                                      GSM7031382

                                      Uncertain

                                      ulcerative colitis colon biopsy, rep 4

                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                      Requirements and decision evidence
                                      • organism: Homo sapiens — Insufficient evidence
                                        • The required value is not reported.
                                        • assay type: bulk RNA-seq — Insufficient evidence
                                          • The required value is not reported.
                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                            • The required value is not reported.
                                            • ulcerative colitis colon biopsy, rep 4 colon tissue: colon; condition: active ulcerative colitis
                                            • ulcerative colitis colon biopsy, rep 4 colon tissue: colon; condition: active ulcerative colitis
                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                            • Supported by the indexed evidence.
                                            • specimen category excludes: Biofluid — Insufficient evidence
                                              • The required value is not reported.
                                              • ulcerative colitis colon biopsy, rep 4 colon tissue: colon; condition: active ulcerative colitis
                                              • ulcerative colitis colon biopsy, rep 4 colon tissue: colon; condition: active ulcerative colitis
                                            Source metadata
                                            Source name
                                            colon
                                            Characteristics
                                            tissue: colon; condition: active ulcerative colitis
                                            Description
                                            Not reported
                                            Indexed organism evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Indexed assay evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Source
                                            GEO
                                            Original indexed metadata
                                            sample_accession: GSM7031382
sample_title: ulcerative colitis colon biopsy, rep 4
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                            GSM7031383

                                            Uncertain

                                            ulcerative colitis colon biopsy, rep 5

                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                            Requirements and decision evidence
                                            • organism: Homo sapiens — Insufficient evidence
                                              • The required value is not reported.
                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                • The required value is not reported.
                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                  • The required value is not reported.
                                                  • ulcerative colitis colon biopsy, rep 5 colon tissue: colon; condition: active ulcerative colitis
                                                  • ulcerative colitis colon biopsy, rep 5 colon tissue: colon; condition: active ulcerative colitis
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                    • The required value is not reported.
                                                    • ulcerative colitis colon biopsy, rep 5 colon tissue: colon; condition: active ulcerative colitis
                                                    • ulcerative colitis colon biopsy, rep 5 colon tissue: colon; condition: active ulcerative colitis
                                                  Source metadata
                                                  Source name
                                                  colon
                                                  Characteristics
                                                  tissue: colon; condition: active ulcerative colitis
                                                  Description
                                                  Not reported
                                                  Indexed organism evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Indexed assay evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Source
                                                  GEO
                                                  Original indexed metadata
                                                  sample_accession: GSM7031383
sample_title: ulcerative colitis colon biopsy, rep 5
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                  GSM7031384

                                                  Uncertain

                                                  ulcerative colitis colon biopsy, rep 6

                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                  Requirements and decision evidence
                                                  • organism: Homo sapiens — Insufficient evidence
                                                    • The required value is not reported.
                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                      • The required value is not reported.
                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                        • The required value is not reported.
                                                        • ulcerative colitis colon biopsy, rep 6 colon tissue: colon; condition: active ulcerative colitis
                                                        • ulcerative colitis colon biopsy, rep 6 colon tissue: colon; condition: active ulcerative colitis
                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                        • Supported by the indexed evidence.
                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                          • The required value is not reported.
                                                          • ulcerative colitis colon biopsy, rep 6 colon tissue: colon; condition: active ulcerative colitis
                                                          • ulcerative colitis colon biopsy, rep 6 colon tissue: colon; condition: active ulcerative colitis
                                                        Source metadata
                                                        Source name
                                                        colon
                                                        Characteristics
                                                        tissue: colon; condition: active ulcerative colitis
                                                        Description
                                                        Not reported
                                                        Indexed organism evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Indexed assay evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Source
                                                        GEO
                                                        Original indexed metadata
                                                        sample_accession: GSM7031384
sample_title: ulcerative colitis colon biopsy, rep 6
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                        GSM7031385

                                                        Uncertain

                                                        ulcerative colitis colon biopsy, rep 7

                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                        Requirements and decision evidence
                                                        • organism: Homo sapiens — Insufficient evidence
                                                          • The required value is not reported.
                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                            • The required value is not reported.
                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                              • The required value is not reported.
                                                              • ulcerative colitis colon biopsy, rep 7 colon tissue: colon; condition: active ulcerative colitis
                                                              • ulcerative colitis colon biopsy, rep 7 colon tissue: colon; condition: active ulcerative colitis
                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                • The required value is not reported.
                                                                • ulcerative colitis colon biopsy, rep 7 colon tissue: colon; condition: active ulcerative colitis
                                                                • ulcerative colitis colon biopsy, rep 7 colon tissue: colon; condition: active ulcerative colitis
                                                              Source metadata
                                                              Source name
                                                              colon
                                                              Characteristics
                                                              tissue: colon; condition: active ulcerative colitis
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM7031385
sample_title: ulcerative colitis colon biopsy, rep 7
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                              GSM7031386

                                                              Uncertain

                                                              ulcerative colitis colon biopsy, rep 8

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • ulcerative colitis colon biopsy, rep 8 colon tissue: colon; condition: active ulcerative colitis
                                                                    • ulcerative colitis colon biopsy, rep 8 colon tissue: colon; condition: active ulcerative colitis
                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                    • Supported by the indexed evidence.
                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • ulcerative colitis colon biopsy, rep 8 colon tissue: colon; condition: active ulcerative colitis
                                                                      • ulcerative colitis colon biopsy, rep 8 colon tissue: colon; condition: active ulcerative colitis
                                                                    Source metadata
                                                                    Source name
                                                                    colon
                                                                    Characteristics
                                                                    tissue: colon; condition: active ulcerative colitis
                                                                    Description
                                                                    Not reported
                                                                    Indexed organism evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Indexed assay evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Source
                                                                    GEO
                                                                    Original indexed metadata
                                                                    sample_accession: GSM7031386
sample_title: ulcerative colitis colon biopsy, rep 8
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                    GSM7031387

                                                                    Uncertain

                                                                    ulcerative colitis colon biopsy, rep 9

                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                    Requirements and decision evidence
                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                        • The required value is not reported.
                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • ulcerative colitis colon biopsy, rep 9 colon tissue: colon; condition: active ulcerative colitis
                                                                          • ulcerative colitis colon biopsy, rep 9 colon tissue: colon; condition: active ulcerative colitis
                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                          • Supported by the indexed evidence.
                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • ulcerative colitis colon biopsy, rep 9 colon tissue: colon; condition: active ulcerative colitis
                                                                            • ulcerative colitis colon biopsy, rep 9 colon tissue: colon; condition: active ulcerative colitis
                                                                          Source metadata
                                                                          Source name
                                                                          colon
                                                                          Characteristics
                                                                          tissue: colon; condition: active ulcerative colitis
                                                                          Description
                                                                          Not reported
                                                                          Indexed organism evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Indexed assay evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Source
                                                                          GEO
                                                                          Original indexed metadata
                                                                          sample_accession: GSM7031387
sample_title: ulcerative colitis colon biopsy, rep 9
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                          GSM7031388

                                                                          Uncertain

                                                                          healthy colon biopsy, rep 4

                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                          Requirements and decision evidence
                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                • The required value is not reported.
                                                                                • healthy colon biopsy, rep 4 colon tissue: colon; condition: healthy
                                                                                • healthy colon biopsy, rep 4 colon tissue: colon; condition: healthy
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • healthy colon biopsy, rep 4 colon tissue: colon; condition: healthy
                                                                                  • healthy colon biopsy, rep 4 colon tissue: colon; condition: healthy
                                                                                Source metadata
                                                                                Source name
                                                                                colon
                                                                                Characteristics
                                                                                tissue: colon; condition: healthy
                                                                                Description
                                                                                Not reported
                                                                                Indexed organism evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Indexed assay evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Source
                                                                                GEO
                                                                                Original indexed metadata
                                                                                sample_accession: GSM7031388
sample_title: healthy colon biopsy, rep 4
source_name: colon
characteristics: tissue: colon; condition: healthy

                                                                                GSM7031389

                                                                                Uncertain

                                                                                healthy colon biopsy, rep 5

                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                Requirements and decision evidence
                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • healthy colon biopsy, rep 5 colon tissue: colon; condition: healthy
                                                                                      • healthy colon biopsy, rep 5 colon tissue: colon; condition: healthy
                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                      • Supported by the indexed evidence.
                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • healthy colon biopsy, rep 5 colon tissue: colon; condition: healthy
                                                                                        • healthy colon biopsy, rep 5 colon tissue: colon; condition: healthy
                                                                                      Source metadata
                                                                                      Source name
                                                                                      colon
                                                                                      Characteristics
                                                                                      tissue: colon; condition: healthy
                                                                                      Description
                                                                                      Not reported
                                                                                      Indexed organism evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Indexed assay evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Source
                                                                                      GEO
                                                                                      Original indexed metadata
                                                                                      sample_accession: GSM7031389
sample_title: healthy colon biopsy, rep 5
source_name: colon
characteristics: tissue: colon; condition: healthy

                                                                                      GSM7031390

                                                                                      Uncertain

                                                                                      healthy colon biopsy, rep 6

                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                      Requirements and decision evidence
                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                          • The required value is not reported.
                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                            • The required value is not reported.
                                                                                            • healthy colon biopsy, rep 6 colon tissue: colon; condition: healthy
                                                                                            • healthy colon biopsy, rep 6 colon tissue: colon; condition: healthy
                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • healthy colon biopsy, rep 6 colon tissue: colon; condition: healthy
                                                                                              • healthy colon biopsy, rep 6 colon tissue: colon; condition: healthy
                                                                                            Source metadata
                                                                                            Source name
                                                                                            colon
                                                                                            Characteristics
                                                                                            tissue: colon; condition: healthy
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM7031390
sample_title: healthy colon biopsy, rep 6
source_name: colon
characteristics: tissue: colon; condition: healthy

                                                                                            GSM7031391

                                                                                            Uncertain

                                                                                            ulcerative colitis colon biopsy, rep 10

                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • ulcerative colitis colon biopsy, rep 10 colon tissue: colon; condition: active ulcerative colitis
                                                                                                  • ulcerative colitis colon biopsy, rep 10 colon tissue: colon; condition: active ulcerative colitis
                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                  • Supported by the indexed evidence.
                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • ulcerative colitis colon biopsy, rep 10 colon tissue: colon; condition: active ulcerative colitis
                                                                                                    • ulcerative colitis colon biopsy, rep 10 colon tissue: colon; condition: active ulcerative colitis
                                                                                                  Source metadata
                                                                                                  Source name
                                                                                                  colon
                                                                                                  Characteristics
                                                                                                  tissue: colon; condition: active ulcerative colitis
                                                                                                  Description
                                                                                                  Not reported
                                                                                                  Indexed organism evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Indexed assay evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Source
                                                                                                  GEO
                                                                                                  Original indexed metadata
                                                                                                  sample_accession: GSM7031391
sample_title: ulcerative colitis colon biopsy, rep 10
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                                                  GSM7031392

                                                                                                  Uncertain

                                                                                                  ulcerative colitis colon biopsy, rep 11

                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                  Requirements and decision evidence
                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                      • The required value is not reported.
                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • ulcerative colitis colon biopsy, rep 11 colon tissue: colon; condition: active ulcerative colitis
                                                                                                        • ulcerative colitis colon biopsy, rep 11 colon tissue: colon; condition: active ulcerative colitis
                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                        • Supported by the indexed evidence.
                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • ulcerative colitis colon biopsy, rep 11 colon tissue: colon; condition: active ulcerative colitis
                                                                                                          • ulcerative colitis colon biopsy, rep 11 colon tissue: colon; condition: active ulcerative colitis
                                                                                                        Source metadata
                                                                                                        Source name
                                                                                                        colon
                                                                                                        Characteristics
                                                                                                        tissue: colon; condition: active ulcerative colitis
                                                                                                        Description
                                                                                                        Not reported
                                                                                                        Indexed organism evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Indexed assay evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Source
                                                                                                        GEO
                                                                                                        Original indexed metadata
                                                                                                        sample_accession: GSM7031392
sample_title: ulcerative colitis colon biopsy, rep 11
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                                                        GSM7031393

                                                                                                        Uncertain

                                                                                                        ulcerative colitis colon biopsy, rep 12

                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                        Requirements and decision evidence
                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                              • The required value is not reported.
                                                                                                              • ulcerative colitis colon biopsy, rep 12 colon tissue: colon; condition: active ulcerative colitis
                                                                                                              • ulcerative colitis colon biopsy, rep 12 colon tissue: colon; condition: active ulcerative colitis
                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • ulcerative colitis colon biopsy, rep 12 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                • ulcerative colitis colon biopsy, rep 12 colon tissue: colon; condition: active ulcerative colitis
                                                                                                              Source metadata
                                                                                                              Source name
                                                                                                              colon
                                                                                                              Characteristics
                                                                                                              tissue: colon; condition: active ulcerative colitis
                                                                                                              Description
                                                                                                              Not reported
                                                                                                              Indexed organism evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Indexed assay evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Source
                                                                                                              GEO
                                                                                                              Original indexed metadata
                                                                                                              sample_accession: GSM7031393
sample_title: ulcerative colitis colon biopsy, rep 12
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                                                              GSM7031394

                                                                                                              Uncertain

                                                                                                              ulcerative colitis colon biopsy, rep 13

                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                              Requirements and decision evidence
                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • ulcerative colitis colon biopsy, rep 13 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                    • ulcerative colitis colon biopsy, rep 13 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                    • Supported by the indexed evidence.
                                                                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • ulcerative colitis colon biopsy, rep 13 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                      • ulcerative colitis colon biopsy, rep 13 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                    Source metadata
                                                                                                                    Source name
                                                                                                                    colon
                                                                                                                    Characteristics
                                                                                                                    tissue: colon; condition: active ulcerative colitis
                                                                                                                    Description
                                                                                                                    Not reported
                                                                                                                    Indexed organism evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Indexed assay evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Source
                                                                                                                    GEO
                                                                                                                    Original indexed metadata
                                                                                                                    sample_accession: GSM7031394
sample_title: ulcerative colitis colon biopsy, rep 13
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                                                                    GSM7031395

                                                                                                                    Uncertain

                                                                                                                    ulcerative colitis colon biopsy, rep 14

                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                    Requirements and decision evidence
                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                        • The required value is not reported.
                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                          • The required value is not reported.
                                                                                                                          • ulcerative colitis colon biopsy, rep 14 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                          • ulcerative colitis colon biopsy, rep 14 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • ulcerative colitis colon biopsy, rep 14 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                            • ulcerative colitis colon biopsy, rep 14 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                          Source metadata
                                                                                                                          Source name
                                                                                                                          colon
                                                                                                                          Characteristics
                                                                                                                          tissue: colon; condition: active ulcerative colitis
                                                                                                                          Description
                                                                                                                          Not reported
                                                                                                                          Indexed organism evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Indexed assay evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Source
                                                                                                                          GEO
                                                                                                                          Original indexed metadata
                                                                                                                          sample_accession: GSM7031395
sample_title: ulcerative colitis colon biopsy, rep 14
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                                                                          GSM7031396

                                                                                                                          Uncertain

                                                                                                                          ulcerative colitis colon biopsy, rep 15

                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                          Requirements and decision evidence
                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                              • The required value is not reported.
                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                • The required value is not reported.
                                                                                                                                • ulcerative colitis colon biopsy, rep 15 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                                • ulcerative colitis colon biopsy, rep 15 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                  • The required value is not reported.
                                                                                                                                  • ulcerative colitis colon biopsy, rep 15 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                                  • ulcerative colitis colon biopsy, rep 15 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                                Source metadata
                                                                                                                                Source name
                                                                                                                                colon
                                                                                                                                Characteristics
                                                                                                                                tissue: colon; condition: active ulcerative colitis
                                                                                                                                Description
                                                                                                                                Not reported
                                                                                                                                Indexed organism evidence
                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                Indexed assay evidence
                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                Source
                                                                                                                                GEO
                                                                                                                                Original indexed metadata
                                                                                                                                sample_accession: GSM7031396
sample_title: ulcerative colitis colon biopsy, rep 15
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                                                                                GSM7031397

                                                                                                                                Uncertain

                                                                                                                                ulcerative colitis colon biopsy, rep 16

                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                Requirements and decision evidence
                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                  • The required value is not reported.
                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                    • The required value is not reported.
                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                      • The required value is not reported.
                                                                                                                                      • ulcerative colitis colon biopsy, rep 16 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                                      • ulcerative colitis colon biopsy, rep 16 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • ulcerative colitis colon biopsy, rep 16 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                                        • ulcerative colitis colon biopsy, rep 16 colon tissue: colon; condition: active ulcerative colitis
                                                                                                                                      Source metadata
                                                                                                                                      Source name
                                                                                                                                      colon
                                                                                                                                      Characteristics
                                                                                                                                      tissue: colon; condition: active ulcerative colitis
                                                                                                                                      Description
                                                                                                                                      Not reported
                                                                                                                                      Indexed organism evidence
                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                      Indexed assay evidence
                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                      Source
                                                                                                                                      GEO
                                                                                                                                      Original indexed metadata
                                                                                                                                      sample_accession: GSM7031397
sample_title: ulcerative colitis colon biopsy, rep 16
source_name: colon
characteristics: tissue: colon; condition: active ulcerative colitis

                                                                                                                                      Excluded samples (0)

                                                                                                                                      No excluded samples.