Matching samples

GSE242140 · Study of the Role of Pomegranate Juice Ellagitannins in the Modulation of Inflammation in Inflammatory Bowel Disease

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (0)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

No uncertain samples.

Excluded samples (20)

GSM7749606

Excluded

PBMC_t0_POMJ_patient01

Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Does not meet requirement
        • The reported value differs from the selected requirement.
        • PBMC_t0_POMJ_patient01 peripheral blood mononuclear cells, t0, pomegranate juice, patient 01 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • specimen category excludes: Biofluid — Does not meet requirement
          • The reported value differs from the selected requirement.
          • PBMC_t0_POMJ_patient01 peripheral blood mononuclear cells, t0, pomegranate juice, patient 01 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
        Source metadata
        Source name
        peripheral blood mononuclear cells, t0, pomegranate juice, patient 01
        Characteristics
        tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
        Description
        Not reported
        Indexed organism evidence
        INFERRED · PARENT_INHERITED: Not reported
        Indexed assay evidence
        INFERRED · PARENT_INHERITED: Not reported
        Source
        GEO
        Original indexed metadata
        sample_accession: GSM7749606
sample_title: PBMC_t0_POMJ_patient01
source_name: peripheral blood mononuclear cells, t0, pomegranate juice, patient 01
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

        GSM7749607

        Excluded

        PBMC_t1_POMJ_patient01

        Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

        Requirements and decision evidence
        • organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • specimen category: Tissue or biopsy — Does not meet requirement
              • The reported value differs from the selected requirement.
              • PBMC_t1_POMJ_patient01 peripheral blood mononuclear cells, t1, pomegranate juice, patient 01 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • specimen category excludes: Biofluid — Does not meet requirement
                • The reported value differs from the selected requirement.
                • PBMC_t1_POMJ_patient01 peripheral blood mononuclear cells, t1, pomegranate juice, patient 01 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
              Source metadata
              Source name
              peripheral blood mononuclear cells, t1, pomegranate juice, patient 01
              Characteristics
              tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM7749607
sample_title: PBMC_t1_POMJ_patient01
source_name: peripheral blood mononuclear cells, t1, pomegranate juice, patient 01
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

              GSM7749608

              Excluded

              PBMC_t0_pbo_patient02

              Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

              Requirements and decision evidence
              • organism: Homo sapiens — Insufficient evidence
                • The required value is not reported.
                • assay type: bulk RNA-seq — Insufficient evidence
                  • The required value is not reported.
                  • specimen category: Tissue or biopsy — Does not meet requirement
                    • The reported value differs from the selected requirement.
                    • PBMC_t0_pbo_patient02 peripheral blood mononuclear cells, t0, placebo, patient 02 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Does not meet requirement
                      • The reported value differs from the selected requirement.
                      • PBMC_t0_pbo_patient02 peripheral blood mononuclear cells, t0, placebo, patient 02 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                    Source metadata
                    Source name
                    peripheral blood mononuclear cells, t0, placebo, patient 02
                    Characteristics
                    tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                    Description
                    Not reported
                    Indexed organism evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Indexed assay evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Source
                    GEO
                    Original indexed metadata
                    sample_accession: GSM7749608
sample_title: PBMC_t0_pbo_patient02
source_name: peripheral blood mononuclear cells, t0, placebo, patient 02
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                    GSM7749609

                    Excluded

                    PBMC_t1_pbo_patient02

                    Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

                    Requirements and decision evidence
                    • organism: Homo sapiens — Insufficient evidence
                      • The required value is not reported.
                      • assay type: bulk RNA-seq — Insufficient evidence
                        • The required value is not reported.
                        • specimen category: Tissue or biopsy — Does not meet requirement
                          • The reported value differs from the selected requirement.
                          • PBMC_t1_pbo_patient02 peripheral blood mononuclear cells, t1, placebo, patient 02 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                          • Supported by the indexed evidence.
                          • specimen category excludes: Biofluid — Does not meet requirement
                            • The reported value differs from the selected requirement.
                            • PBMC_t1_pbo_patient02 peripheral blood mononuclear cells, t1, placebo, patient 02 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                          Source metadata
                          Source name
                          peripheral blood mononuclear cells, t1, placebo, patient 02
                          Characteristics
                          tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM7749609
sample_title: PBMC_t1_pbo_patient02
source_name: peripheral blood mononuclear cells, t1, placebo, patient 02
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                          GSM7749610

                          Excluded

                          PBMC_t0_POMJ_patient03

                          Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                          Requirements and decision evidence
                          • organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • specimen category: Tissue or biopsy — Does not meet requirement
                                • The reported value differs from the selected requirement.
                                • PBMC_t0_POMJ_patient03 peripheral blood mononuclear cells, t0, pomegranate juice, patient 03 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Ulcerat...
                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                • Supported by the indexed evidence.
                                • specimen category excludes: Biofluid — Does not meet requirement
                                  • The reported value differs from the selected requirement.
                                  • PBMC_t0_POMJ_patient03 peripheral blood mononuclear cells, t0, pomegranate juice, patient 03 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Ulcerat...
                                Source metadata
                                Source name
                                peripheral blood mononuclear cells, t0, pomegranate juice, patient 03
                                Characteristics
                                tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Ulcerative colitis
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM7749610
sample_title: PBMC_t0_POMJ_patient03
source_name: peripheral blood mononuclear cells, t0, pomegranate juice, patient 03
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Ulcerative colitis

                                GSM7749611

                                Excluded

                                PBMC_t1_POMJ_patient03

                                Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Does not meet requirement
                                      • The reported value differs from the selected requirement.
                                      • PBMC_t1_POMJ_patient03 peripheral blood mononuclear cells, t1, pomegranate juice, patient 03 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Ulcerat...
                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                      • Supported by the indexed evidence.
                                      • specimen category excludes: Biofluid — Does not meet requirement
                                        • The reported value differs from the selected requirement.
                                        • PBMC_t1_POMJ_patient03 peripheral blood mononuclear cells, t1, pomegranate juice, patient 03 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Ulcerat...
                                      Source metadata
                                      Source name
                                      peripheral blood mononuclear cells, t1, pomegranate juice, patient 03
                                      Characteristics
                                      tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Ulcerative colitis
                                      Description
                                      Not reported
                                      Indexed organism evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Indexed assay evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Source
                                      GEO
                                      Original indexed metadata
                                      sample_accession: GSM7749611
sample_title: PBMC_t1_POMJ_patient03
source_name: peripheral blood mononuclear cells, t1, pomegranate juice, patient 03
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Ulcerative colitis

                                      GSM7749612

                                      Excluded

                                      PBMC_t0_POMJ_patient04

                                      Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                      Requirements and decision evidence
                                      • organism: Homo sapiens — Insufficient evidence
                                        • The required value is not reported.
                                        • assay type: bulk RNA-seq — Insufficient evidence
                                          • The required value is not reported.
                                          • specimen category: Tissue or biopsy — Does not meet requirement
                                            • The reported value differs from the selected requirement.
                                            • PBMC_t0_POMJ_patient04 peripheral blood mononuclear cells, t0, pomegranate juice, patient 04 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                            • Supported by the indexed evidence.
                                            • specimen category excludes: Biofluid — Does not meet requirement
                                              • The reported value differs from the selected requirement.
                                              • PBMC_t0_POMJ_patient04 peripheral blood mononuclear cells, t0, pomegranate juice, patient 04 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                            Source metadata
                                            Source name
                                            peripheral blood mononuclear cells, t0, pomegranate juice, patient 04
                                            Characteristics
                                            tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                            Description
                                            Not reported
                                            Indexed organism evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Indexed assay evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Source
                                            GEO
                                            Original indexed metadata
                                            sample_accession: GSM7749612
sample_title: PBMC_t0_POMJ_patient04
source_name: peripheral blood mononuclear cells, t0, pomegranate juice, patient 04
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                                            GSM7749613

                                            Excluded

                                            PBMC_t1_POMJ_patient04

                                            Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                            Requirements and decision evidence
                                            • organism: Homo sapiens — Insufficient evidence
                                              • The required value is not reported.
                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                • The required value is not reported.
                                                • specimen category: Tissue or biopsy — Does not meet requirement
                                                  • The reported value differs from the selected requirement.
                                                  • PBMC_t1_POMJ_patient04 peripheral blood mononuclear cells, t1, pomegranate juice, patient 04 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Does not meet requirement
                                                    • The reported value differs from the selected requirement.
                                                    • PBMC_t1_POMJ_patient04 peripheral blood mononuclear cells, t1, pomegranate juice, patient 04 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                  Source metadata
                                                  Source name
                                                  peripheral blood mononuclear cells, t1, pomegranate juice, patient 04
                                                  Characteristics
                                                  tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                  Description
                                                  Not reported
                                                  Indexed organism evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Indexed assay evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Source
                                                  GEO
                                                  Original indexed metadata
                                                  sample_accession: GSM7749613
sample_title: PBMC_t1_POMJ_patient04
source_name: peripheral blood mononuclear cells, t1, pomegranate juice, patient 04
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                                                  GSM7749614

                                                  Excluded

                                                  PBMC_t0_POMJ_patient05

                                                  Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                                  Requirements and decision evidence
                                                  • organism: Homo sapiens — Insufficient evidence
                                                    • The required value is not reported.
                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                      • The required value is not reported.
                                                      • specimen category: Tissue or biopsy — Does not meet requirement
                                                        • The reported value differs from the selected requirement.
                                                        • PBMC_t0_POMJ_patient05 peripheral blood mononuclear cells, t0, pomegranate juice, patient 05 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                        • Supported by the indexed evidence.
                                                        • specimen category excludes: Biofluid — Does not meet requirement
                                                          • The reported value differs from the selected requirement.
                                                          • PBMC_t0_POMJ_patient05 peripheral blood mononuclear cells, t0, pomegranate juice, patient 05 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                        Source metadata
                                                        Source name
                                                        peripheral blood mononuclear cells, t0, pomegranate juice, patient 05
                                                        Characteristics
                                                        tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                        Description
                                                        Not reported
                                                        Indexed organism evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Indexed assay evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Source
                                                        GEO
                                                        Original indexed metadata
                                                        sample_accession: GSM7749614
sample_title: PBMC_t0_POMJ_patient05
source_name: peripheral blood mononuclear cells, t0, pomegranate juice, patient 05
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                                                        GSM7749615

                                                        Excluded

                                                        PBMC_t1_POMJ_patient05

                                                        Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                                        Requirements and decision evidence
                                                        • organism: Homo sapiens — Insufficient evidence
                                                          • The required value is not reported.
                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                            • The required value is not reported.
                                                            • specimen category: Tissue or biopsy — Does not meet requirement
                                                              • The reported value differs from the selected requirement.
                                                              • PBMC_t1_POMJ_patient05 peripheral blood mononuclear cells, t1, pomegranate juice, patient 05 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              • specimen category excludes: Biofluid — Does not meet requirement
                                                                • The reported value differs from the selected requirement.
                                                                • PBMC_t1_POMJ_patient05 peripheral blood mononuclear cells, t1, pomegranate juice, patient 05 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                              Source metadata
                                                              Source name
                                                              peripheral blood mononuclear cells, t1, pomegranate juice, patient 05
                                                              Characteristics
                                                              tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM7749615
sample_title: PBMC_t1_POMJ_patient05
source_name: peripheral blood mononuclear cells, t1, pomegranate juice, patient 05
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                                                              GSM7749616

                                                              Excluded

                                                              PBMC_t0_pbo_patient06

                                                              Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Does not meet requirement
                                                                    • The reported value differs from the selected requirement.
                                                                    • PBMC_t0_pbo_patient06 peripheral blood mononuclear cells, t0, placebo, patient 06 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Crohn's disease
                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                    • Supported by the indexed evidence.
                                                                    • specimen category excludes: Biofluid — Does not meet requirement
                                                                      • The reported value differs from the selected requirement.
                                                                      • PBMC_t0_pbo_patient06 peripheral blood mononuclear cells, t0, placebo, patient 06 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Crohn's disease
                                                                    Source metadata
                                                                    Source name
                                                                    peripheral blood mononuclear cells, t0, placebo, patient 06
                                                                    Characteristics
                                                                    tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Crohn's disease
                                                                    Description
                                                                    Not reported
                                                                    Indexed organism evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Indexed assay evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Source
                                                                    GEO
                                                                    Original indexed metadata
                                                                    sample_accession: GSM7749616
sample_title: PBMC_t0_pbo_patient06
source_name: peripheral blood mononuclear cells, t0, placebo, patient 06
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Crohn's disease

                                                                    GSM7749617

                                                                    Excluded

                                                                    PBMC_t1_pbo_patient06

                                                                    Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

                                                                    Requirements and decision evidence
                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                        • The required value is not reported.
                                                                        • specimen category: Tissue or biopsy — Does not meet requirement
                                                                          • The reported value differs from the selected requirement.
                                                                          • PBMC_t1_pbo_patient06 peripheral blood mononuclear cells, t1, placebo, patient 06 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Crohn's disease
                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                          • Supported by the indexed evidence.
                                                                          • specimen category excludes: Biofluid — Does not meet requirement
                                                                            • The reported value differs from the selected requirement.
                                                                            • PBMC_t1_pbo_patient06 peripheral blood mononuclear cells, t1, placebo, patient 06 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Crohn's disease
                                                                          Source metadata
                                                                          Source name
                                                                          peripheral blood mononuclear cells, t1, placebo, patient 06
                                                                          Characteristics
                                                                          tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Crohn's disease
                                                                          Description
                                                                          Not reported
                                                                          Indexed organism evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Indexed assay evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Source
                                                                          GEO
                                                                          Original indexed metadata
                                                                          sample_accession: GSM7749617
sample_title: PBMC_t1_pbo_patient06
source_name: peripheral blood mononuclear cells, t1, placebo, patient 06
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Crohn's disease

                                                                          GSM7749618

                                                                          Excluded

                                                                          PBMC_t0_pbo_patient07

                                                                          Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

                                                                          Requirements and decision evidence
                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • specimen category: Tissue or biopsy — Does not meet requirement
                                                                                • The reported value differs from the selected requirement.
                                                                                • PBMC_t0_pbo_patient07 peripheral blood mononuclear cells, t0, placebo, patient 07 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Does not meet requirement
                                                                                  • The reported value differs from the selected requirement.
                                                                                  • PBMC_t0_pbo_patient07 peripheral blood mononuclear cells, t0, placebo, patient 07 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                                                Source metadata
                                                                                Source name
                                                                                peripheral blood mononuclear cells, t0, placebo, patient 07
                                                                                Characteristics
                                                                                tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                                                Description
                                                                                Not reported
                                                                                Indexed organism evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Indexed assay evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Source
                                                                                GEO
                                                                                Original indexed metadata
                                                                                sample_accession: GSM7749618
sample_title: PBMC_t0_pbo_patient07
source_name: peripheral blood mononuclear cells, t0, placebo, patient 07
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                                                                                GSM7749619

                                                                                Excluded

                                                                                PBMC_t1_pbo_patient07

                                                                                Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.

                                                                                Requirements and decision evidence
                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • specimen category: Tissue or biopsy — Does not meet requirement
                                                                                      • The reported value differs from the selected requirement.
                                                                                      • PBMC_t1_pbo_patient07 peripheral blood mononuclear cells, t1, placebo, patient 07 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                      • Supported by the indexed evidence.
                                                                                      • specimen category excludes: Biofluid — Does not meet requirement
                                                                                        • The reported value differs from the selected requirement.
                                                                                        • PBMC_t1_pbo_patient07 peripheral blood mononuclear cells, t1, placebo, patient 07 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                                                      Source metadata
                                                                                      Source name
                                                                                      peripheral blood mononuclear cells, t1, placebo, patient 07
                                                                                      Characteristics
                                                                                      tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                                                      Description
                                                                                      Not reported
                                                                                      Indexed organism evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Indexed assay evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Source
                                                                                      GEO
                                                                                      Original indexed metadata
                                                                                      sample_accession: GSM7749619
sample_title: PBMC_t1_pbo_patient07
source_name: peripheral blood mononuclear cells, t1, placebo, patient 07
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                                                                                      GSM7749620

                                                                                      Excluded

                                                                                      PBMC_t0_POMJ_patient09

                                                                                      Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                                                                      Requirements and decision evidence
                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                          • The required value is not reported.
                                                                                          • specimen category: Tissue or biopsy — Does not meet requirement
                                                                                            • The reported value differs from the selected requirement.
                                                                                            • PBMC_t0_POMJ_patient09 peripheral blood mononuclear cells, t0, pomegranate juice, patient 09 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            • specimen category excludes: Biofluid — Does not meet requirement
                                                                                              • The reported value differs from the selected requirement.
                                                                                              • PBMC_t0_POMJ_patient09 peripheral blood mononuclear cells, t0, pomegranate juice, patient 09 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                                                            Source metadata
                                                                                            Source name
                                                                                            peripheral blood mononuclear cells, t0, pomegranate juice, patient 09
                                                                                            Characteristics
                                                                                            tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM7749620
sample_title: PBMC_t0_POMJ_patient09
source_name: peripheral blood mononuclear cells, t0, pomegranate juice, patient 09
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                                                                                            GSM7749621

                                                                                            Excluded

                                                                                            PBMC_t1_POMJ_patient09

                                                                                            Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • specimen category: Tissue or biopsy — Does not meet requirement
                                                                                                  • The reported value differs from the selected requirement.
                                                                                                  • PBMC_t1_POMJ_patient09 peripheral blood mononuclear cells, t1, pomegranate juice, patient 09 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                  • Supported by the indexed evidence.
                                                                                                  • specimen category excludes: Biofluid — Does not meet requirement
                                                                                                    • The reported value differs from the selected requirement.
                                                                                                    • PBMC_t1_POMJ_patient09 peripheral blood mononuclear cells, t1, pomegranate juice, patient 09 tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerativ...
                                                                                                  Source metadata
                                                                                                  Source name
                                                                                                  peripheral blood mononuclear cells, t1, pomegranate juice, patient 09
                                                                                                  Characteristics
                                                                                                  tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis
                                                                                                  Description
                                                                                                  Not reported
                                                                                                  Indexed organism evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Indexed assay evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Source
                                                                                                  GEO
                                                                                                  Original indexed metadata
                                                                                                  sample_accession: GSM7749621
sample_title: PBMC_t1_POMJ_patient09
source_name: peripheral blood mononuclear cells, t1, pomegranate juice, patient 09
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: male; disease: Ulcerative colitis

                                                                                                  GSM7749622

                                                                                                  Excluded

                                                                                                  PBMC_t0_POMJ_patient10

                                                                                                  Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                                                                                  Requirements and decision evidence
                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                      • The required value is not reported.
                                                                                                      • specimen category: Tissue or biopsy — Does not meet requirement
                                                                                                        • The reported value differs from the selected requirement.
                                                                                                        • PBMC_t0_POMJ_patient10 peripheral blood mononuclear cells, t0, pomegranate juice, patient 10 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's...
                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                        • Supported by the indexed evidence.
                                                                                                        • specimen category excludes: Biofluid — Does not meet requirement
                                                                                                          • The reported value differs from the selected requirement.
                                                                                                          • PBMC_t0_POMJ_patient10 peripheral blood mononuclear cells, t0, pomegranate juice, patient 10 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's...
                                                                                                        Source metadata
                                                                                                        Source name
                                                                                                        peripheral blood mononuclear cells, t0, pomegranate juice, patient 10
                                                                                                        Characteristics
                                                                                                        tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's disease
                                                                                                        Description
                                                                                                        Not reported
                                                                                                        Indexed organism evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Indexed assay evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Source
                                                                                                        GEO
                                                                                                        Original indexed metadata
                                                                                                        sample_accession: GSM7749622
sample_title: PBMC_t0_POMJ_patient10
source_name: peripheral blood mononuclear cells, t0, pomegranate juice, patient 10
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's disease

                                                                                                        GSM7749623

                                                                                                        Excluded

                                                                                                        PBMC_t1_POMJ_patient10

                                                                                                        Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                                                                                        Requirements and decision evidence
                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • specimen category: Tissue or biopsy — Does not meet requirement
                                                                                                              • The reported value differs from the selected requirement.
                                                                                                              • PBMC_t1_POMJ_patient10 peripheral blood mononuclear cells, t1, pomegranate juice, patient 10 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's...
                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • specimen category excludes: Biofluid — Does not meet requirement
                                                                                                                • The reported value differs from the selected requirement.
                                                                                                                • PBMC_t1_POMJ_patient10 peripheral blood mononuclear cells, t1, pomegranate juice, patient 10 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's...
                                                                                                              Source metadata
                                                                                                              Source name
                                                                                                              peripheral blood mononuclear cells, t1, pomegranate juice, patient 10
                                                                                                              Characteristics
                                                                                                              tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's disease
                                                                                                              Description
                                                                                                              Not reported
                                                                                                              Indexed organism evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Indexed assay evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Source
                                                                                                              GEO
                                                                                                              Original indexed metadata
                                                                                                              sample_accession: GSM7749623
sample_title: PBMC_t1_POMJ_patient10
source_name: peripheral blood mononuclear cells, t1, pomegranate juice, patient 10
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's disease

                                                                                                              GSM7749624

                                                                                                              Excluded

                                                                                                              PBMC_t0_POMJ_patient14

                                                                                                              Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                                                                                              Requirements and decision evidence
                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • specimen category: Tissue or biopsy — Does not meet requirement
                                                                                                                    • The reported value differs from the selected requirement.
                                                                                                                    • PBMC_t0_POMJ_patient14 peripheral blood mononuclear cells, t0, pomegranate juice, patient 14 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's...
                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                    • Supported by the indexed evidence.
                                                                                                                    • specimen category excludes: Biofluid — Does not meet requirement
                                                                                                                      • The reported value differs from the selected requirement.
                                                                                                                      • PBMC_t0_POMJ_patient14 peripheral blood mononuclear cells, t0, pomegranate juice, patient 14 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's...
                                                                                                                    Source metadata
                                                                                                                    Source name
                                                                                                                    peripheral blood mononuclear cells, t0, pomegranate juice, patient 14
                                                                                                                    Characteristics
                                                                                                                    tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's disease
                                                                                                                    Description
                                                                                                                    Not reported
                                                                                                                    Indexed organism evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Indexed assay evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Source
                                                                                                                    GEO
                                                                                                                    Original indexed metadata
                                                                                                                    sample_accession: GSM7749624
sample_title: PBMC_t0_POMJ_patient14
source_name: peripheral blood mononuclear cells, t0, pomegranate juice, patient 14
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's disease

                                                                                                                    GSM7749625

                                                                                                                    Excluded

                                                                                                                    PBMC_t1_POMJ_patient14

                                                                                                                    Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.

                                                                                                                    Requirements and decision evidence
                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                        • The required value is not reported.
                                                                                                                        • specimen category: Tissue or biopsy — Does not meet requirement
                                                                                                                          • The reported value differs from the selected requirement.
                                                                                                                          • PBMC_t1_POMJ_patient14 peripheral blood mononuclear cells, t1, pomegranate juice, patient 14 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's...
                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          • specimen category excludes: Biofluid — Does not meet requirement
                                                                                                                            • The reported value differs from the selected requirement.
                                                                                                                            • PBMC_t1_POMJ_patient14 peripheral blood mononuclear cells, t1, pomegranate juice, patient 14 tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's...
                                                                                                                          Source metadata
                                                                                                                          Source name
                                                                                                                          peripheral blood mononuclear cells, t1, pomegranate juice, patient 14
                                                                                                                          Characteristics
                                                                                                                          tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's disease
                                                                                                                          Description
                                                                                                                          Not reported
                                                                                                                          Indexed organism evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Indexed assay evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Source
                                                                                                                          GEO
                                                                                                                          Original indexed metadata
                                                                                                                          sample_accession: GSM7749625
sample_title: PBMC_t1_POMJ_patient14
source_name: peripheral blood mononuclear cells, t1, pomegranate juice, patient 14
characteristics: tissue: peripheral blood mononuclear cells (PBMCs); gender: female; disease: Crohn's disease