Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips

Whole-study status Not suitable

Dataset does not meet the current suitability threshold.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

34 case / 32 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: bulk RNA-seq
Organism: Homo sapiens
Whole-study samples: 66 samples
Specimen: Tissue
Reported/interpreted study design: Disease/model vs control Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Ozkan A, Sperry M, Horvath V, Ingber D
Contact name: Alican Ozkan
Submission date: 2024-09-24
Last update: 2025-03-11
Organization: Harvard University
Department: Wyss Institute
Public date: 2025-01-02
Experiment types: Expression profiling by high throughput sequencing
Platforms: GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Series type: Series
SubSeries: Not available
BioProject: PRJNA1164829

Summary

Inflammatory bowel disease (IBD) patients exhibit compromised intestinal barrier function, enhanced inflammation, and increased cancer risk, with symptoms sometimes being exacerbated in women during pregnancy. To investigate the IBD phenotype and disease progression in human intestine, we leveraged organ-on-a-chip (Organ Chip) technology to engineer human Colon Chips lined by homotypic or heterotypic recombinants of intestinal epithelium interfaced with stromal fibroblasts isolated from Healthy or IBD patient-derived colon resections. Chips created with both epithelial and stromal cells from the same ulcerative colitis or Crohn's disease patient showed increased IBD-associated gene pathway activation, elevated pro-inflammatory cytokines, reduced mucus layer thickness, increased intestinal barrier permeability, compared to homotypic Healthy Colon Chips. When heterotypic tissue recombinants were created, the IBD stromal fibroblasts induced the IBD phenotype in healthy epithelium, and healthy colonic fibroblasts partially reduced inflammation in the IBD epithelium. Using this system, we discovered that peristalsis-like mechanical deformations directly impact colon tissue physiology by increasing mucin gene expression, mucus thickness, and barrier permeability in both Healthy and IBD Chips, and that they only stimulate a fibrotic response in IBD Chips. We also found that both inflammation and fibrosis were accentuated in IBD Chips created with cells from a female patient that were exposed to pregnancy-associated hormones. Interestingly, exposure to a carcinogen (N-ethyl-N-nitrosourea) for 3 weeks in vitro induced histological changes and gene duplication in the IBD Chips, but not in the Healthy Chips. These data suggest that the stroma plays a key role in driving inflammation and disease progression in IBD patients and that human Organ Chip technology may represent a new preclinical tool to gain insight into these mechanisms as well as to identify novel diagnostic biomarkers and therapeutics.

Overall design

Comparative gene expression profiling analysis of RNA-seq data for IBD pathology (Crohn's disease and Ulcerative Colitis) modeled in Human Colon Chips.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 66 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Planned source for curated expression experiment links.	No match found
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 2 linked publications 2 DOIs Primary publication Human Organ Chips Reveal New Inflammatory Bowel Disease Drivers. medRxiv : the preprint server for health sciences, 2025 PubMed DOI Human Organ Chips Reveal New Inflammatory Bowel Disease Drivers. Research square, 2025 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

100 pts

Clarity: 100%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Ready after review

100% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

10/10 pts

No dataset warnings are present.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

Verify the proposed sample assignments and case-versus-control comparison against the GEO metadata before using them in DESeq2 or another differential-expression tool.
Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Review the grouping table for biologically meaningful differences that the automated checks may not detect.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

By Siftome standards, no expert review was triggered.

Why This Is Ranked Here

Tumor vs normal

Not suitable Dataset does not meet the current suitability threshold.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Disease context Crohn's disease, fibrosis, inflammatory bowel disease, ulcerative colitis Disease context came from Normalization rules.
Likely case group Ulcerative colitis 34 samples
Likely control group Healthy control 32 samples

Ranking Facts

Supporting evidence

Comparison: Disease/model vs control. Specimen: Tissue. Comparison suitability: 0%.
Prioritized assay: bulk RNA-seq is the active assay expectation.
Interpreted disease metadata: Crohn's disease, Fibrosis, Inflammatory bowel disease, Ulcerative colitis.
Processed data is available for downstream review.
External evidence: PubMed links 2 publications; 2 DOIs available: PMID 39677416, PMID 39975910.
Publication context: Human Organ Chips Reveal New Inflammatory Bowel Disease Drivers.. medRxiv : the preprint server for health sciences, 2025. PMID 39677416. DOI 10.1101/2024.12.05.24318563.
Publication context: Human Organ Chips Reveal New Inflammatory Bowel Disease Drivers.. Research square, 2025. PMID 39975910. DOI 10.21203/rs.3.rs-5627712/v1.

Cautions

Disease/control design without a tumor/normal comparison is outside tumor/normal triage.
Overall score capped because comparison suitability is weak for the selected search intent.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

No dataset warnings

Normalized Fields

240 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source colon GSM8535393 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535394 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535395 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535396 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535397 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535398 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535399 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535400 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535401 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535402 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535403 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535404 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535405 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535406 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535407 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535408 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535409 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535410 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535411 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535412 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535413 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535414 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535415 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535416 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535417 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535418 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535419 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535420 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535421 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535422 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535423 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535424 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535425 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535426 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535427 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535428 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535429 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535430 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535431 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535432 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535433 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535434 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535435 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535436 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535437 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535438 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535439 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535440 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535441 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535442 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535443 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535444 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535445 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535446 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535447 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535448 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535449 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535450 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535451 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535452 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535453 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535454 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535455 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535456 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535457 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM8535458 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colon tissue: colon sample-anatomical-source-v1 sample-local anatomical source

assay_type bulk RNA-seq GSE277964 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence bulk rna-seq dataset_accession: GSE277964 dataset_title: Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips organism: Homo sapiens... keyword match keyword match: bulk rna-seq

disease Crohn's disease GSE277964 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease dataset_accession: GSE277964 dataset_title: Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips organism: Homo sapiens... controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease fibrosis GSE277964 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis dataset_accession: GSE277964 dataset_title: Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips organism: Homo sapiens... controlled vocabulary controlled vocabulary disease match: fibrosis

disease inflammatory bowel disease GSE277964 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence inflammatory bowel disease dataset_accession: GSE277964 dataset_title: Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips organism: Homo sapiens... controlled vocabulary controlled vocabulary disease match: inflammatory bowel disease

disease ulcerative colitis GSE277964 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis dataset_accession: GSE277964 dataset_title: Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips organism: Homo sapiens... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535393 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535393 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535394 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535394 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535395 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535395 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535396 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535396 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535397 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535397 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535398 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535398 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535399 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535399 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535400 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535400 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535401 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535401 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535402 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535402 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535403 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535403 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535404 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535404 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535405 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535405 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535406 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535406 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535407 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep3 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535407 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep3 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535408 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep3 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535408 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep3 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535409 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H3, rep1 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535410 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H3, rep1 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535411 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H3, rep2 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535412 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H3, rep2 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535413 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H3, rep3 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535414 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H3, rep3 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535415 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, no strain, donor H3, rep1 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535416 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, no strain, donor H3, rep1 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535417 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, no strain, donor H3, rep2 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535418 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, no strain, donor H3, rep2 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535419 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, no strain, donor H3, rep3 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535420 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, no strain, donor H3, rep3 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535421 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535421 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535422 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535422 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535423 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535423 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535424 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535424 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535425 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535425 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease inflammatory bowel disease GSM8535426 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ibd

disease ulcerative colitis GSM8535426 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM8535427 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon epithelium, IBD, crohn's, no strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535427 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, crohn's, no strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535428 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon fibroblast, IBD, crohn's, no strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535428 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, crohn's, no strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535429 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon epithelium, IBD, crohn's, no strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535429 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, crohn's, no strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535430 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon fibroblast, IBD, crohn's, no strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535430 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, crohn's, no strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535431 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon epithelium, IBD, crohn's, no strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535431 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, crohn's, no strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535432 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon fibroblast, IBD, crohn's, no strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535432 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, crohn's, no strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535433 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, no strain, donor H1, rep1 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535434 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, no strain, donor H1, rep1 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535435 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, no strain, donor H1, rep2 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535436 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, no strain, donor H1, rep2 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535437 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, no strain, donor H2, rep1 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535438 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, no strain, donor H2, rep1 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535439 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, no strain, donor H2, rep2 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535440 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, no strain, donor H2, rep2 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535441 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon epithelium, IBD, crohn's, strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535441 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, crohn's, strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535442 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon fibroblast, IBD, crohn's, strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535442 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, crohn's, strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535443 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon epithelium, IBD, crohn's, strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535443 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, crohn's, strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535444 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon fibroblast, IBD, crohn's, strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535444 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, crohn's, strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535445 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon epithelium, IBD, crohn's, strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535445 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, IBD, crohn's, strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease Crohn's disease GSM8535446 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence Crohn's Colon fibroblast, IBD, crohn's, strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: Crohn's

disease inflammatory bowel disease GSM8535446 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, IBD, crohn's, strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535447 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H1, rep1 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535448 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H1, rep1 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535449 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H1, rep2 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535450 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H1, rep2 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535451 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H1, rep3 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535452 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H1, rep3 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535453 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H2, rep1 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535454 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H2, rep1 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535455 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H2, rep2 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535456 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H2, rep2 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535457 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon epithelium, healthy, strain, donor H2, rep3 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

disease inflammatory bowel disease GSM8535458 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ibd Colon fibroblast, healthy, strain, donor H2, rep3 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary disease match: ibd

organism Homo sapiens GSE277964 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE277964 dataset_title: Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips organism: Homo sapiens... keyword match keyword match: homo sapiens

tissue colon GSE277964 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon dataset_accession: GSE277964 dataset_title: Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips organism: Homo sapiens... controlled vocabulary controlled vocabulary tissue match: colon

tissue intestine GSE277964 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence intestine dataset_accession: GSE277964 dataset_title: Contribution of Stroma to Inflammatory Bowel Disease Progression Revealed in Patient-Derived Human Colon Chips organism: Homo sapiens... controlled vocabulary controlled vocabulary tissue match: intestine

tissue colon GSM8535393 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535394 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535395 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535396 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535397 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535398 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535399 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535400 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535401 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535402 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535403 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535404 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep1 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535405 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535406 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep2 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535407 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep3 colon donor: UC1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535408 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep3 colon donor: UC1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535409 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H3, rep1 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535410 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H3, rep1 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535411 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H3, rep2 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535412 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H3, rep2 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535413 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H3, rep3 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535414 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H3, rep3 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535415 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, no strain, donor H3, rep1 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535416 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, no strain, donor H3, rep1 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535417 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, no strain, donor H3, rep2 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535418 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, no strain, donor H3, rep2 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535419 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, no strain, donor H3, rep3 colon donor: H3; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535420 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, no strain, donor H3, rep3 colon donor: H3; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535421 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535422 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535423 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; st... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535424 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep1 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535425 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep2 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535426 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep3 colon donor: UC3; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: ulcerative colitis; stimu... controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535427 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, crohn's, no strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535428 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, crohn's, no strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535429 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, crohn's, no strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535430 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, crohn's, no strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535431 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, crohn's, no strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535432 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, crohn's, no strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535433 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, no strain, donor H1, rep1 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535434 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, no strain, donor H1, rep1 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535435 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, no strain, donor H1, rep2 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535436 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, no strain, donor H1, rep2 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535437 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, no strain, donor H2, rep1 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535438 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, no strain, donor H2, rep1 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535439 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, no strain, donor H2, rep2 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535440 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, no strain, donor H2, rep2 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: no strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535441 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, crohn's, strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535442 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, crohn's, strain, donor C1, rep1 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535443 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, crohn's, strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535444 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, crohn's, strain, donor C1, rep2 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535445 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, IBD, crohn's, strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: epithelial; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535446 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, IBD, crohn's, strain, donor C1, rep3 colon donor: C1; tissue: colon; cell type: fibroblast; phenotype: IBD; ibd subtype: crohn's; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535447 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H1, rep1 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535448 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H1, rep1 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535449 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H1, rep2 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535450 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H1, rep2 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535451 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H1, rep3 colon donor: H1; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535452 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H1, rep3 colon donor: H1; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535453 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H2, rep1 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535454 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H2, rep1 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535455 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H2, rep2 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535456 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H2, rep2 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535457 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon epithelium, healthy, strain, donor H2, rep3 colon donor: H2; tissue: colon; cell type: epithelial; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

tissue colon GSM8535458 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence colon Colon fibroblast, healthy, strain, donor H2, rep3 colon donor: H2; tissue: colon; cell type: fibroblast; phenotype: healthy; ibd subtype: N/A; stimulus: strain controlled vocabulary controlled vocabulary tissue match: colon

Sample Group Preview

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Study totals: Case 34 | Control 32 | Unassigned 0 | Excluded 0 | Ambiguous 0 66 rows shown

Group	Role	Accession	Title	Source / characteristics	Reason
Ulcerative colitis	Case	GSM8535393	Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep1	Colon Donor: UC3; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535394	Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep2	Colon Donor: UC3; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535395	Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep2	Colon Donor: UC3; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535396	Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep3	Colon Donor: UC3; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535397	Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC3, rep3	Colon Donor: UC3; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535398	Colon fibroblast, IBD, ulcerative colitis, strain, donor UC3, rep1	Colon Donor: UC3; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535399	Colon epithelium, IBD, ulcerative colitis, strain, donor UC1, rep1	Colon Donor: UC1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535400	Colon fibroblast, IBD, ulcerative colitis, strain, donor UC1, rep1	Colon Donor: UC1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535401	Colon epithelium, IBD, ulcerative colitis, strain, donor UC1, rep2	Colon Donor: UC1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535402	Colon fibroblast, IBD, ulcerative colitis, strain, donor UC1, rep2	Colon Donor: UC1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535403	Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep1	Colon Donor: UC1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535404	Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep1	Colon Donor: UC1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535405	Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep2	Colon Donor: UC1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535406	Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep2	Colon Donor: UC1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535407	Colon epithelium, IBD, ulcerative colitis, no strain, donor UC1, rep3	Colon Donor: UC1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535408	Colon fibroblast, IBD, ulcerative colitis, no strain, donor UC1, rep3	Colon Donor: UC1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535421	Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep2	Colon Donor: UC3; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535422	Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep1	Colon Donor: UC3; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535423	Colon epithelium, IBD, ulcerative colitis, no strain, donor UC3, rep3	Colon Donor: UC3; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: No strain	Case marker detected.
Ulcerative colitis	Case	GSM8535424	Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep1	Colon Donor: UC3; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535425	Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep2	Colon Donor: UC3; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Ulcerative colitis	Case	GSM8535426	Colon epithelium, IBD, ulcerative colitis, strain, donor UC3, rep3	Colon Donor: UC3; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Ulcerative colitis; Stimulus: Strain	Case marker detected.
Crohn's disease	Case	GSM8535427	Colon epithelium, IBD, crohn's, no strain, donor C1, rep1	Colon Donor: C1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: No strain	Case marker detected.
Crohn's disease	Case	GSM8535428	Colon fibroblast, IBD, crohn's, no strain, donor C1, rep1	Colon Donor: C1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: No strain	Case marker detected.
Crohn's disease	Case	GSM8535429	Colon epithelium, IBD, crohn's, no strain, donor C1, rep2	Colon Donor: C1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: No strain	Case marker detected.
Crohn's disease	Case	GSM8535430	Colon fibroblast, IBD, crohn's, no strain, donor C1, rep2	Colon Donor: C1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: No strain	Case marker detected.
Crohn's disease	Case	GSM8535431	Colon epithelium, IBD, crohn's, no strain, donor C1, rep3	Colon Donor: C1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: No strain	Case marker detected.
Crohn's disease	Case	GSM8535432	Colon fibroblast, IBD, crohn's, no strain, donor C1, rep3	Colon Donor: C1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: No strain	Case marker detected.
Crohn's disease	Case	GSM8535441	Colon epithelium, IBD, crohn's, strain, donor C1, rep1	Colon Donor: C1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: Strain	Case marker detected.
Crohn's disease	Case	GSM8535442	Colon fibroblast, IBD, crohn's, strain, donor C1, rep1	Colon Donor: C1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: Strain	Case marker detected.
Crohn's disease	Case	GSM8535443	Colon epithelium, IBD, crohn's, strain, donor C1, rep2	Colon Donor: C1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: Strain	Case marker detected.
Crohn's disease	Case	GSM8535444	Colon fibroblast, IBD, crohn's, strain, donor C1, rep2	Colon Donor: C1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: Strain	Case marker detected.
Crohn's disease	Case	GSM8535445	Colon epithelium, IBD, crohn's, strain, donor C1, rep3	Colon Donor: C1; Tissue: Colon; Cell type: Epithelial; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: Strain	Case marker detected.
Crohn's disease	Case	GSM8535446	Colon fibroblast, IBD, crohn's, strain, donor C1, rep3	Colon Donor: C1; Tissue: Colon; Cell type: Fibroblast; Phenotype: IBD; Ibd subtype: Crohn's; Stimulus: Strain	Case marker detected.
Healthy control	Control	GSM8535409	Colon epithelium, healthy, strain, donor H3, rep1	Colon Donor: H3; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535410	Colon fibroblast, healthy, strain, donor H3, rep1	Colon Donor: H3; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535411	Colon epithelium, healthy, strain, donor H3, rep2	Colon Donor: H3; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535412	Colon fibroblast, healthy, strain, donor H3, rep2	Colon Donor: H3; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535413	Colon epithelium, healthy, strain, donor H3, rep3	Colon Donor: H3; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535414	Colon fibroblast, healthy, strain, donor H3, rep3	Colon Donor: H3; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535415	Colon epithelium, healthy, no strain, donor H3, rep1	Colon Donor: H3; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535416	Colon fibroblast, healthy, no strain, donor H3, rep1	Colon Donor: H3; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535417	Colon epithelium, healthy, no strain, donor H3, rep2	Colon Donor: H3; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535418	Colon fibroblast, healthy, no strain, donor H3, rep2	Colon Donor: H3; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535419	Colon epithelium, healthy, no strain, donor H3, rep3	Colon Donor: H3; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535420	Colon fibroblast, healthy, no strain, donor H3, rep3	Colon Donor: H3; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535433	Colon epithelium, healthy, no strain, donor H1, rep1	Colon Donor: H1; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535434	Colon fibroblast, healthy, no strain, donor H1, rep1	Colon Donor: H1; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535435	Colon epithelium, healthy, no strain, donor H1, rep2	Colon Donor: H1; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535436	Colon fibroblast, healthy, no strain, donor H1, rep2	Colon Donor: H1; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535437	Colon epithelium, healthy, no strain, donor H2, rep1	Colon Donor: H2; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535438	Colon fibroblast, healthy, no strain, donor H2, rep1	Colon Donor: H2; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535439	Colon epithelium, healthy, no strain, donor H2, rep2	Colon Donor: H2; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535440	Colon fibroblast, healthy, no strain, donor H2, rep2	Colon Donor: H2; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: No strain	Sample-local control marker detected.
Healthy control	Control	GSM8535447	Colon epithelium, healthy, strain, donor H1, rep1	Colon Donor: H1; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535448	Colon fibroblast, healthy, strain, donor H1, rep1	Colon Donor: H1; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535449	Colon epithelium, healthy, strain, donor H1, rep2	Colon Donor: H1; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535450	Colon fibroblast, healthy, strain, donor H1, rep2	Colon Donor: H1; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535451	Colon epithelium, healthy, strain, donor H1, rep3	Colon Donor: H1; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535452	Colon fibroblast, healthy, strain, donor H1, rep3	Colon Donor: H1; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535453	Colon epithelium, healthy, strain, donor H2, rep1	Colon Donor: H2; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535454	Colon fibroblast, healthy, strain, donor H2, rep1	Colon Donor: H2; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535455	Colon epithelium, healthy, strain, donor H2, rep2	Colon Donor: H2; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535456	Colon fibroblast, healthy, strain, donor H2, rep2	Colon Donor: H2; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535457	Colon epithelium, healthy, strain, donor H2, rep3	Colon Donor: H2; Tissue: Colon; Cell type: Epithelial; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.
Healthy control	Control	GSM8535458	Colon fibroblast, healthy, strain, donor H2, rep3	Colon Donor: H2; Tissue: Colon; Cell type: Fibroblast; Phenotype: Healthy; Ibd subtype: N/A; Stimulus: Strain	Sample-local control marker detected.

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Carry Siftome's disease, organism, specimen, assay, data type, and accession into a validation project. Uncertain fields remain Unknown.

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Use as Discovery Cohort