GSE294985

Transcriptomes of human whole blood cells in sepsis patients

Whole-study status Exploratory only

Dataset can inform exploration but is not strong enough for primary analysis.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

View matching samples

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: bulk RNA-seq
Organism: Homo sapiens
Whole-study samples: 40 samples
Specimen: Biofluid
Reported/interpreted study design: Patient biofluid vs healthy control Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Xue H, Zhu F
Contact name: Haiyan Xue
Submission date: 2025-04-17
Last update: 2026-03-11
Organization: Peking University People's Hospital
Department: Not available
Public date: 2026-03-11
Experiment types: Expression profiling by high throughput sequencing
Platforms: GPL29480 DNBSEQ-T7 (Homo sapiens)
Series type: Series
SubSeries: Not available
BioProject: PRJNA1252151

Summary

This study focuses on the transcriptomic characteristics of whole blood cells in sepsis patients. Sepsis is a severe systemic infection that often leads to multiple organ dysfunction. Its pathogenesis is complex and involves the abnormal activation of various cellular and molecular pathways. By analyzing the transcriptomes of whole blood cells in sepsis patients through sequencing, we aim to reveal the key changes in gene expression and their potential regulatory mechanisms during the onset and progression of sepsis. The study included sepsis patients with different underlying diseases and also set up a healthy control group for comparative analysis.

Overall design

RNA-seq profiling from the whole blood cells from 10 healthy controls and 30 sepsis patients.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 40 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Planned source for curated expression experiment links.	No match found
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 1 linked publication 1 DOI Primary publication Construction of a robust sepsis prognostic classifier based on E3 ubiquitin ligase-related genes. Frontiers in molecular biosciences, 2026 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

100 pts

Clarity: 100%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Ready after review

100% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

10/10 pts

No dataset warnings are present.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

Verify the proposed sample assignments and case-versus-control comparison against the GEO metadata before using them in DESeq2 or another differential-expression tool.
Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Review the grouping table for biologically meaningful differences that the automated checks may not detect.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

By Siftome standards, no expert review was triggered.

Why This Is Ranked Here

Tumor vs normal

Exploratory only Dataset can inform exploration but is not strong enough for primary analysis.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Disease context Sepsis Disease context came from Normalization rules.
Likely case group Sepsis or systemic inflammatory response 30 samples
Likely control group Healthy control 10 samples

Intent Interpretation

Downgrade or exclusion reason Downgraded for tissue search because it is a biofluid cohort. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

Comparison: Patient biofluid vs healthy control. Specimen: Biofluid. Comparison suitability: 20%.
Prioritized assay: bulk RNA-seq is the active assay expectation.
Interpreted disease metadata: Infectious disease or host response, Sepsis.
Processed data is available for downstream review.
External evidence: PubMed links 1 publication; 1 DOI available: PMID 41783141.
Publication context: Construction of a robust sepsis prognostic classifier based on E3 ubiquitin ligase-related genes.. Frontiers in molecular biosciences, 2026. PMID 41783141. DOI 10.3389/fmolb.2026.1726356.

Cautions

Downgraded for tissue search because it is a biofluid cohort.
Blood, plasma, or serum cohort downgraded because this ranking targets tissue tumor-vs-normal comparisons.
Overall score capped because comparison suitability is weak for the selected search intent.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

No dataset warnings

Normalized Fields

184 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source blood GSM8936490 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936491 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936492 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936493 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936494 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936495 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936496 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936497 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936498 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936499 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936500 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936501 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936502 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936503 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936504 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936505 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936506 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936507 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936508 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936509 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936510 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936511 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936512 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936513 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936514 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936515 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936516 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936517 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936518 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936519 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936520 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936521 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936522 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936523 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936524 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936525 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936526 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936527 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936528 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

anatomical_source blood GSM8936529 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood tissue: whole blood cells sample-anatomical-source-v1 sample-local anatomical source

assay_type bulk RNA-seq GSE294985 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence bulk rna-seq dataset_accession: GSE294985 dataset_title: Transcriptomes of human whole blood cells in sepsis patients organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available... keyword match keyword match: bulk rna-seq

control_type healthy control GSM8936490 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 1 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl1 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936491 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 2 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl2 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936492 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 3 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl3 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936493 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 4 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl4 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936494 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 5 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl5 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936495 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 6 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl6 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936496 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 7 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl7 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936497 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 8 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl8 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936498 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 9 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl9 controlled vocabulary controlled vocabulary control type match: healthy control

control_type healthy control GSM8936499 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 10 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl10 controlled vocabulary controlled vocabulary control type match: healthy control

disease sepsis GSE294985 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis dataset_accession: GSE294985 dataset_title: Transcriptomes of human whole blood cells in sepsis patients organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available... controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936500 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 1 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep1 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936501 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 2 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep2 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936502 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 3 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep3 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936503 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 4 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep4 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936504 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 5 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep5 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936505 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 6 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep6 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936506 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 7 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep7 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936507 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 8 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep8 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936508 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 9 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep9 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936509 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 10 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep10 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936510 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 11 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep11 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936511 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 12 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep12 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936512 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 13 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep13 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936513 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 14 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep14 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936514 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 15 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep15 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936515 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 16 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep16 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936516 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 17 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep17 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936517 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 18 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep18 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936518 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 19 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep19 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936519 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 20 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep20 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936520 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 21 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep21 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936521 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 22 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep22 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936522 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 23 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep23 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936523 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 24 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep24 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936524 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 25 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep25 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936525 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 26 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep26 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936526 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 27 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep27 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936527 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 28 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep28 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936528 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 29 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep29 controlled vocabulary controlled vocabulary disease match: sepsis

disease sepsis GSM8936529 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence sepsis sepsis patient 30 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep30 controlled vocabulary controlled vocabulary disease match: sepsis

normal_tissue_type healthy donor tissue GSM8936490 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 1 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl1 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936491 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 2 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl2 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936492 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 3 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl3 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936493 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 4 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl4 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936494 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 5 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl5 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936495 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 6 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl6 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936496 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 7 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl7 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936497 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 8 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl8 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936498 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 9 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl9 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

normal_tissue_type healthy donor tissue GSM8936499 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 10 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl10 controlled vocabulary controlled vocabulary normal tissue type match: healthy control

organism Homo sapiens GSE294985 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE294985 dataset_title: Transcriptomes of human whole blood cells in sepsis patients organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available... keyword match keyword match: homo sapiens

sample_type normal tissue GSM8936490 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 1 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl1 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936491 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 2 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl2 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936492 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 3 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl3 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936493 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 4 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl4 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936494 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 5 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl5 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936495 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 6 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl6 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936496 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 7 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl7 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936497 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 8 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl8 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936498 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 9 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl9 controlled vocabulary controlled vocabulary sample type match: healthy control

sample_type normal tissue GSM8936499 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence healthy control healthy control 10 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl10 controlled vocabulary controlled vocabulary sample type match: healthy control

specimen_material whole blood GSM8936490 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 1 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl1 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936491 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 2 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl2 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936492 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 3 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl3 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936493 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 4 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl4 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936494 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 5 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl5 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936495 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 6 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl6 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936496 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 7 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl7 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936497 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 8 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl8 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936498 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 9 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl9 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936499 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood healthy control 10 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl10 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936500 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 1 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep1 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936501 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 2 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep2 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936502 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 3 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep3 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936503 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 4 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep4 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936504 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 5 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep5 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936505 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 6 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep6 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936506 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 7 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep7 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936507 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 8 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep8 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936508 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 9 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep9 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936509 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 10 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep10 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936510 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 11 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep11 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936511 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 12 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep12 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936512 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 13 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep13 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936513 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 14 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep14 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936514 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 15 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep15 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936515 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 16 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep16 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936516 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 17 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep17 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936517 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 18 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep18 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936518 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 19 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep19 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936519 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 20 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep20 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936520 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 21 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep21 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936521 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 22 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep22 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936522 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 23 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep23 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936523 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 24 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep24 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936524 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 25 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep25 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936525 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 26 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep26 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936526 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 27 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep27 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936527 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 28 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep28 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936528 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 29 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep29 controlled vocabulary controlled vocabulary specimen material match: whole blood

specimen_material whole blood GSM8936529 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence whole blood sepsis patient 30 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep30 controlled vocabulary controlled vocabulary specimen material match: whole blood

tissue blood GSE294985 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood dataset_accession: GSE294985 dataset_title: Transcriptomes of human whole blood cells in sepsis patients organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available... controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936490 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 1 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl1 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936491 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 2 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl2 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936492 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 3 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl3 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936493 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 4 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl4 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936494 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 5 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl5 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936495 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 6 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl6 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936496 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 7 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl7 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936497 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 8 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl8 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936498 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 9 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl9 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936499 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood healthy control 10 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: ctrl10 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936500 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 1 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep1 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936501 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 2 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep2 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936502 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 3 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep3 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936503 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 4 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep4 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936504 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 5 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep5 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936505 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 6 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep6 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936506 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 7 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep7 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936507 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 8 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep8 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936508 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 9 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep9 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936509 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 10 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep10 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936510 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 11 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep11 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936511 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 12 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep12 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936512 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 13 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep13 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936513 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 14 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep14 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936514 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 15 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep15 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936515 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 16 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep16 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936516 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 17 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep17 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936517 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 18 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep18 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936518 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 19 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep19 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936519 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 20 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep20 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936520 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 21 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep21 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936521 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 22 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep22 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936522 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 23 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep23 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936523 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 24 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep24 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936524 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 25 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep25 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936525 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 26 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep26 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936526 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 27 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep27 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936527 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 28 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep28 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936528 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 29 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep29 controlled vocabulary controlled vocabulary tissue match: blood

tissue blood GSM8936529 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence blood sepsis patient 30 whole blood cells tissue: whole blood cells; cell type: whole blood cells Library name: Sep30 controlled vocabulary controlled vocabulary tissue match: blood

Sample Group Preview

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Study totals: Case 30 | Control 10 | Unassigned 0 | Excluded 0 | Ambiguous 0 40 rows shown

Group	Role	Accession	Title	Source / characteristics	Reason
Sepsis or systemic inflammatory response	Case	GSM8936500	Sepsis patient 1	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936501	Sepsis patient 2	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936502	Sepsis patient 3	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936503	Sepsis patient 4	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936504	Sepsis patient 5	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936505	Sepsis patient 6	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936506	Sepsis patient 7	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936507	Sepsis patient 8	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936508	Sepsis patient 9	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936509	Sepsis patient 10	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936510	Sepsis patient 11	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936511	Sepsis patient 12	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936512	Sepsis patient 13	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936513	Sepsis patient 14	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936514	Sepsis patient 15	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936515	Sepsis patient 16	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936516	Sepsis patient 17	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936517	Sepsis patient 18	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936518	Sepsis patient 19	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936519	Sepsis patient 20	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936520	Sepsis patient 21	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936521	Sepsis patient 22	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936522	Sepsis patient 23	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936523	Sepsis patient 24	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936524	Sepsis patient 25	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936525	Sepsis patient 26	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936526	Sepsis patient 27	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936527	Sepsis patient 28	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936528	Sepsis patient 29	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Sepsis or systemic inflammatory response	Case	GSM8936529	Sepsis patient 30	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Explicit sample label case marker detected.
Healthy control	Control	GSM8936490	Healthy control 1	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936491	Healthy control 2	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936492	Healthy control 3	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936493	Healthy control 4	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936494	Healthy control 5	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936495	Healthy control 6	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936496	Healthy control 7	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936497	Healthy control 8	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936498	Healthy control 9	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.
Healthy control	Control	GSM8936499	Healthy control 10	Whole blood cells Tissue: Whole blood cells; Cell type: Whole blood cells	Sample-local control marker detected.

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Use as Discovery Cohort