GSE33258

Gene expression profiling in HCV associated liver disease

Whole-study status Not suitable

Dataset does not meet the current suitability threshold.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

View matching samples

36 case / 0 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: microarray
Organism: Homo sapiens
Whole-study samples: 36 samples
Specimen: Biopsy
Reported/interpreted study design: Unclear study design Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Ijaz B, Ahmad W, Hassan S
Contact name: Sajida Hassan
Submission date: 2011-10-26
Last update: 2020-02-18
Organization: University of the Punjab
Department: CEMB
Public date: 2011-11-21
Experiment types: Expression profiling by array
Platforms: GPL14795 Human Operon Array
Series type: Series
SubSeries: Not available
BioProject: PRJNA149045

Summary

Expression of human genes was compared in liver fibrosis stage F1, F2, F3, and F4 to find markers that can differentiate among each fibrosis stages and cirrhosis.

Overall design

Four- condition experiment, F1 vs. F2 vs. F3 vs. F4. Biological replicates: 3 Normal, 3 F1, 3 F2, 3 F3 and 3 F4 stage samples.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 36 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Planned source for curated expression experiment links.	No match found
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 2 linked publications 2 DOIs Primary publication HCV infection causes cirrhosis in human by step-wise regulation of host genes involved in cellular functioning and defense during fibrosis: Identification of bio-markers. Genes & diseases, 2019 PubMed DOI Gene expression profiling of HCV genotype 3a initial liver fibrosis and cirrhosis patients using microarray. Journal of translational medicine, 2012 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

93 pts

Clarity: 93%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Only one side of the comparison is clearly grouped. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Not ready

55% DE readiness

Contrast completeness

10/25 pts

Only one side of the contrast is present; downstream DE needs both groups.

Minimum group size

0/20 pts

Minimum group size cannot be evaluated until a complete contrast exists.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

0/10 pts

Critical warnings must be resolved before downstream analysis.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No complete case/control contrast is available.
Critical dataset warnings must be resolved.

Next Steps

Resolve critical warnings before downstream analysis.

Analysis Preparation Checklist

4/6 ready

Group labels reviewed

Blocked

No complete case/control grouping exists yet.

Review the sample grouping table and assign both case and control groups.

Minimum sample count met

Blocked

At least one group has fewer than 2 samples.

Choose a larger dataset or merge only scientifically valid groups.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Review the grouping table for biologically meaningful differences that the automated checks may not detect.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Analysis readiness has blockers that must be resolved before DE.

Analysis preparation checklist contains blocked items.

No complete case/control or treatment/control contrast is available.

At least one comparison group has fewer than two samples.

Critical dataset warnings are present.

Assay context may require expert handling before DESeq2-style analysis.

Study design is model-system or unclear and should be reviewed before analysis.

Why This Is Ranked Here

Tumor vs normal

Not suitable Dataset does not meet the current suitability threshold.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Assay differs from search intent Microarray Search intent expects bulk RNA-seq. Assay came from Normalization rules.
Disease context Fibrosis, liver fibrosis Disease context came from Normalization rules.
Likely case group Liver fibrosis 36 samples
Likely control group No control group detected 0 samples

Intent Interpretation

Downgrade or exclusion reason Comparison: Unclear study design. Specimen: Biopsy. Comparison suitability: 0%. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

Interpreted disease metadata: Fibrosis, Infectious disease or host response, Liver fibrosis.
Processed data is available for downstream review.
External evidence: PubMed links 2 publications; 2 DOIs available: PMID 22397681, PMID 32042870.
Publication context: Gene expression profiling of HCV genotype 3a initial liver fibrosis and cirrhosis patients using microarray.. Journal of translational medicine, 2012. PMID 22397681. DOI 10.1186/1479-5876-10-41.
Publication context: HCV infection causes cirrhosis in human by step-wise regulation of host genes involved in cellular functioning and defense during fibrosis: Identification of bio-markers.. Genes & diseases, 2019. PMID 32042870. DOI 10.1016/j.gendis.2019.04.007.

Cautions

Comparison: Unclear study design. Specimen: Biopsy. Comparison suitability: 0%.
Downgraded for tissue search because study design or specimen source is unclear.
Downgraded assay: microarray cohorts are separated from the RNA-seq intent.
Unclear study design downgraded for patient tissue tumor-vs-normal search intent.
Missing or unclear metadata. Unclear study design downgraded for patient tissue tumor-vs-normal search intent.
Overall score capped because comparison suitability is weak for the selected search intent.
Missing or unclear metadata. Comparison - Unclear study design. Specimen - Biopsy. Comparison suitability: 0%.
Missing or unclear metadata. Downgraded for tissue search because study design or specimen source is unclear.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

No clear control group was detected from normalized metadata.
Microarray expression context was detected; compare separately from RNA-seq cohorts.
Microarray datasets are downgraded in the patient-tissue tumor-normal intent unless secondary assays are explicitly enabled.
Patient-tissue tumor-normal intent requires clear tumor-normal grouping.

Normalized Fields

221 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source liver GSM822892 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822893 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822894 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822895 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822896 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822897 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822898 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822899 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822900 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822901 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822902 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822903 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822904 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822905 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822906 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822907 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822908 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822909 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822910 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822911 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822912 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822913 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822914 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822915 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822916 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822917 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822918 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822919 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822920 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822921 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822922 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822923 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822924 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822925 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822926 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

anatomical_source liver GSM822927 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver tissue: HCV infected human liver biopsy samples sample-anatomical-source-v1 sample-local anatomical source

assay_type microarray GSE33258 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence microarray dataset_accession: GSE33258 dataset_title: Gene expression profiling in HCV associated liver disease organism: Homo sapiens assay_type: microarray processed_data_available: true... keyword match keyword match: microarray

collection_method biopsy GSM822892 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 1_1 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822893 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 1_2 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822894 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 1_3 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822895 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 1_1 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822896 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 1_2 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822897 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 1_3 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822898 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 1_1 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822899 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 1_2 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822900 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 1_3 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822901 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 2_1 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822902 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 2_2 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822903 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 2_3 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822904 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 2_1 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822905 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 2_2 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822906 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 2_3 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822907 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 2_1 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822908 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 2_2 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822909 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 2_3 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822910 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 3_1 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822911 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 3_2 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822912 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 3_3 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822913 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 3_1 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822914 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 3_2 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822915 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 3_3 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822916 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 3_1 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822917 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 3_2 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822918 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 3_3 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822919 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 4_1 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822920 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 4_2 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822921 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 4_3 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822922 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 4_1 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822923 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 4_2 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822924 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 4_3 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822925 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 4_1 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822926 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 4_2 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM822927 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 4_3 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary collection method match: biopsy

disease fibrosis GSE33258 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis dataset_accession: GSE33258 dataset_title: Gene expression profiling in HCV associated liver disease organism: Homo sapiens assay_type: microarray processed_data_available: true... controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSE33258 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis dataset_accession: GSE33258 dataset_title: Gene expression profiling in HCV associated liver disease organism: Homo sapiens assay_type: microarray processed_data_available: true... controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822892 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 1_1 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822892 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 1_1 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822893 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 1_2 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822893 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 1_2 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822894 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 1_3 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822894 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 1_3 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822895 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 1_1 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822895 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 1_1 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822896 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 1_2 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822896 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 1_2 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822897 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 1_3 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822897 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 1_3 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822898 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 1_1 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822898 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 1_1 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822899 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 1_2 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822899 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 1_2 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822900 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 1_3 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822900 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 1_3 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822901 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 2_1 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822901 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 2_1 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822902 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 2_2 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822902 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 2_2 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822903 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 2_3 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822903 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 2_3 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822904 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 2_1 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822904 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 2_1 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822905 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 2_2 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822905 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 2_2 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822906 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 2_3 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822906 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 2_3 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822907 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 2_1 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822907 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 2_1 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822908 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 2_2 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822908 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 2_2 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822909 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 2_3 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822909 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 2_3 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822910 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 3_1 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822910 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 3_1 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822911 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 3_2 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822911 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 3_2 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822912 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 3_3 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822912 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 3_3 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822913 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 3_1 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822913 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 3_1 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822914 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 3_2 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822914 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 3_2 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822915 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 3_3 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822915 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 3_3 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822916 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 3_1 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822916 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 3_1 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822917 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 3_2 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822917 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 3_2 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822918 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 3_3 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822918 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 3_3 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822919 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 4_1 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822919 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 4_1 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822920 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 4_2 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822920 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 4_2 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822921 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N1_Fibrosis stage 4_3 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822921 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N1_Fibrosis stage 4_3 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822922 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 4_1 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822922 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 4_1 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822923 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 4_2 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822923 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 4_2 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822924 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N2_Fibrosis stage 4_3 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822924 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N2_Fibrosis stage 4_3 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822925 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 4_1 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822925 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 4_1 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822926 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 4_2 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822926 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 4_2 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

disease fibrosis GSM822927 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence fibrosis N3_Fibrosis stage 4_3 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: fibrosis

disease liver fibrosis GSM822927 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence liver fibrosis N3_Fibrosis stage 4_3 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary disease match: liver fibrosis

organism Homo sapiens GSE33258 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE33258 dataset_title: Gene expression profiling in HCV associated liver disease organism: Homo sapiens assay_type: microarray processed_data_available: true... keyword match keyword match: homo sapiens

primary_tissue primary tissue GSM822892 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 1_1 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822893 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 1_2 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822894 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 1_3 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822895 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 1_1 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822896 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 1_2 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822897 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 1_3 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822898 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 1_1 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822899 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 1_2 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822900 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 1_3 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822901 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 2_1 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822902 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 2_2 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822903 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 2_3 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822904 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 2_1 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822905 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 2_2 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822906 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 2_3 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822907 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 2_1 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822908 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 2_2 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822909 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 2_3 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822910 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 3_1 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822911 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 3_2 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822912 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 3_3 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822913 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 3_1 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822914 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 3_2 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822915 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 3_3 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822916 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 3_1 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822917 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 3_2 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822918 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 3_3 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822919 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 4_1 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822920 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 4_2 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822921 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N1_Fibrosis stage 4_3 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822922 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 4_1 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822923 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 4_2 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822924 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N2_Fibrosis stage 4_3 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822925 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 4_1 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822926 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 4_2 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM822927 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy N3_Fibrosis stage 4_3 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary primary tissue match: biopsy

tissue liver GSE33258 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver dataset_accession: GSE33258 dataset_title: Gene expression profiling in HCV associated liver disease organism: Homo sapiens assay_type: microarray processed_data_available: true... controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822892 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 1_1 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822893 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 1_2 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822894 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 1_3 N1_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822895 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 1_1 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822896 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 1_2 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822897 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 1_3 N2_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822898 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 1_1 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822899 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 1_2 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822900 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 1_3 N3_Fibrosis stage 1 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F1 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822901 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 2_1 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822902 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 2_2 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822903 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 2_3 N1_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822904 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 2_1 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822905 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 2_2 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822906 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 2_3 N2_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822907 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 2_1 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822908 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 2_2 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822909 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 2_3 N3_Fibrosis stage 2 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F2 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822910 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 3_1 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822911 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 3_2 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822912 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 3_3 N1_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822913 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 3_1 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822914 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 3_2 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822915 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 3_3 N2_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822916 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 3_1 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822917 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 3_2 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822918 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 3_3 N3_Fibrosis stage 3 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F3 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822919 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 4_1 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822920 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 4_2 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822921 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N1_Fibrosis stage 4_3 N1_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822922 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 4_1 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822923 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 4_2 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822924 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N2_Fibrosis stage 4_3 N2_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822925 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 4_1 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822926 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 4_2 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver GSM822927 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence liver N3_Fibrosis stage 4_3 N3_Fibrosis stage 4 tissue: HCV infected human liver biopsy samples; liver fibrosis stage: F4 controlled vocabulary controlled vocabulary tissue match: liver

Sample Group Preview

36 rows shown Show Hide

Study totals: Case 36 | Control 0 | Unassigned 0 | Excluded 0 | Ambiguous 0 36 rows shown

Group	Role	Accession	Title	Source / characteristics	Reason
Liver fibrosis	Case	GSM822892	N1_Fibrosis stage 1_1	N1_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822893	N1_Fibrosis stage 1_2	N1_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822894	N1_Fibrosis stage 1_3	N1_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822895	N2_Fibrosis stage 1_1	N2_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822896	N2_Fibrosis stage 1_2	N2_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822897	N2_Fibrosis stage 1_3	N2_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822898	N3_Fibrosis stage 1_1	N3_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822899	N3_Fibrosis stage 1_2	N3_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822900	N3_Fibrosis stage 1_3	N3_Fibrosis stage 1 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F1	Case marker detected.
Liver fibrosis	Case	GSM822901	N1_Fibrosis stage 2_1	N1_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822902	N1_Fibrosis stage 2_2	N1_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822903	N1_Fibrosis stage 2_3	N1_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822904	N2_Fibrosis stage 2_1	N2_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822905	N2_Fibrosis stage 2_2	N2_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822906	N2_Fibrosis stage 2_3	N2_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822907	N3_Fibrosis stage 2_1	N3_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822908	N3_Fibrosis stage 2_2	N3_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822909	N3_Fibrosis stage 2_3	N3_Fibrosis stage 2 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F2	Case marker detected.
Liver fibrosis	Case	GSM822910	N1_Fibrosis stage 3_1	N1_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822911	N1_Fibrosis stage 3_2	N1_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822912	N1_Fibrosis stage 3_3	N1_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822913	N2_Fibrosis stage 3_1	N2_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822914	N2_Fibrosis stage 3_2	N2_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822915	N2_Fibrosis stage 3_3	N2_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822916	N3_Fibrosis stage 3_1	N3_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822917	N3_Fibrosis stage 3_2	N3_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822918	N3_Fibrosis stage 3_3	N3_Fibrosis stage 3 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F3	Case marker detected.
Liver fibrosis	Case	GSM822919	N1_Fibrosis stage 4_1	N1_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.
Liver fibrosis	Case	GSM822920	N1_Fibrosis stage 4_2	N1_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.
Liver fibrosis	Case	GSM822921	N1_Fibrosis stage 4_3	N1_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.
Liver fibrosis	Case	GSM822922	N2_Fibrosis stage 4_1	N2_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.
Liver fibrosis	Case	GSM822923	N2_Fibrosis stage 4_2	N2_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.
Liver fibrosis	Case	GSM822924	N2_Fibrosis stage 4_3	N2_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.
Liver fibrosis	Case	GSM822925	N3_Fibrosis stage 4_1	N3_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.
Liver fibrosis	Case	GSM822926	N3_Fibrosis stage 4_2	N3_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.
Liver fibrosis	Case	GSM822927	N3_Fibrosis stage 4_3	N3_Fibrosis stage 4 Tissue: HCV infected human liver biopsy samples; Liver fibrosis stage: F4	Case marker detected.

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Carry Siftome's disease, organism, specimen, assay, data type, and accession into a validation project. Uncertain fields remain Unknown.

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Use as Discovery Cohort