Matching samples

GSE36807 · Genome-wide analysis of Crohn's disease and ulcerative colitis biopsy samples.

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

28 case / 7 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (35)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM901319

Uncertain

08SE1903_Healthy control

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • 08SE1903_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
        • 08SE1903_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • specimen category excludes: Biofluid — Insufficient evidence
          • The required value is not reported.
          • 08SE1903_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
          • 08SE1903_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
        Source metadata
        Source name
        Intestinal biopsy
        Characteristics
        diagnosis: Healthy control; gender: Unknown; smoker: Unknown
        Description
        Not reported
        Indexed organism evidence
        INFERRED · PARENT_INHERITED: Not reported
        Indexed assay evidence
        INFERRED · PARENT_INHERITED: Not reported
        Source
        GEO
        Original indexed metadata
        sample_accession: GSM901319
        sample_title: 08SE1903_Healthy control
        source_name: Intestinal biopsy
        characteristics: diagnosis: Healthy control; gender: Unknown; smoker: Unknown

        GSM901320

        Uncertain

        08SE1904_Healthy control

        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

        Requirements and decision evidence
        • organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • specimen category: Tissue or biopsy — Insufficient evidence
              • The required value is not reported.
              • 08SE1904_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
              • 08SE1904_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • specimen category excludes: Biofluid — Insufficient evidence
                • The required value is not reported.
                • 08SE1904_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                • 08SE1904_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
              Source metadata
              Source name
              Intestinal biopsy
              Characteristics
              diagnosis: Healthy control; gender: Unknown; smoker: Unknown
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM901320
              sample_title: 08SE1904_Healthy control
              source_name: Intestinal biopsy
              characteristics: diagnosis: Healthy control; gender: Unknown; smoker: Unknown

              GSM901321

              Uncertain

              08SE1905_Healthy control

              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

              Requirements and decision evidence
              • organism: Homo sapiens — Insufficient evidence
                • The required value is not reported.
                • assay type: bulk RNA-seq — Insufficient evidence
                  • The required value is not reported.
                  • specimen category: Tissue or biopsy — Insufficient evidence
                    • The required value is not reported.
                    • 08SE1905_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                    • 08SE1905_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Insufficient evidence
                      • The required value is not reported.
                      • 08SE1905_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                      • 08SE1905_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                    Source metadata
                    Source name
                    Intestinal biopsy
                    Characteristics
                    diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                    Description
                    Not reported
                    Indexed organism evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Indexed assay evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Source
                    GEO
                    Original indexed metadata
                    sample_accession: GSM901321
                    sample_title: 08SE1905_Healthy control
                    source_name: Intestinal biopsy
                    characteristics: diagnosis: Healthy control; gender: Unknown; smoker: Unknown

                    GSM901322

                    Uncertain

                    08SE1906_Healthy control

                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                    Requirements and decision evidence
                    • organism: Homo sapiens — Insufficient evidence
                      • The required value is not reported.
                      • assay type: bulk RNA-seq — Insufficient evidence
                        • The required value is not reported.
                        • specimen category: Tissue or biopsy — Insufficient evidence
                          • The required value is not reported.
                          • 08SE1906_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                          • 08SE1906_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                          • Supported by the indexed evidence.
                          • specimen category excludes: Biofluid — Insufficient evidence
                            • The required value is not reported.
                            • 08SE1906_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                            • 08SE1906_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                          Source metadata
                          Source name
                          Intestinal biopsy
                          Characteristics
                          diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM901322
                          sample_title: 08SE1906_Healthy control
                          source_name: Intestinal biopsy
                          characteristics: diagnosis: Healthy control; gender: Unknown; smoker: Unknown

                          GSM901323

                          Uncertain

                          08SE1907_Healthy control

                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                          Requirements and decision evidence
                          • organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • specimen category: Tissue or biopsy — Insufficient evidence
                                • The required value is not reported.
                                • 08SE1907_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                • 08SE1907_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                • Supported by the indexed evidence.
                                • specimen category excludes: Biofluid — Insufficient evidence
                                  • The required value is not reported.
                                  • 08SE1907_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                  • 08SE1907_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                Source metadata
                                Source name
                                Intestinal biopsy
                                Characteristics
                                diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM901323
                                sample_title: 08SE1907_Healthy control
                                source_name: Intestinal biopsy
                                characteristics: diagnosis: Healthy control; gender: Unknown; smoker: Unknown

                                GSM901324

                                Uncertain

                                08SE1910_Healthy control

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • 08SE1910_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                      • 08SE1910_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                      • Supported by the indexed evidence.
                                      • specimen category excludes: Biofluid — Insufficient evidence
                                        • The required value is not reported.
                                        • 08SE1910_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                        • 08SE1910_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                      Source metadata
                                      Source name
                                      Intestinal biopsy
                                      Characteristics
                                      diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                      Description
                                      Not reported
                                      Indexed organism evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Indexed assay evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Source
                                      GEO
                                      Original indexed metadata
                                      sample_accession: GSM901324
                                      sample_title: 08SE1910_Healthy control
                                      source_name: Intestinal biopsy
                                      characteristics: diagnosis: Healthy control; gender: Unknown; smoker: Unknown

                                      GSM901325

                                      Uncertain

                                      08SE1911_Healthy control

                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                      Requirements and decision evidence
                                      • organism: Homo sapiens — Insufficient evidence
                                        • The required value is not reported.
                                        • assay type: bulk RNA-seq — Insufficient evidence
                                          • The required value is not reported.
                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                            • The required value is not reported.
                                            • 08SE1911_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                            • 08SE1911_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                            • Supported by the indexed evidence.
                                            • specimen category excludes: Biofluid — Insufficient evidence
                                              • The required value is not reported.
                                              • 08SE1911_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                              • 08SE1911_Healthy control Intestinal biopsy diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                            Source metadata
                                            Source name
                                            Intestinal biopsy
                                            Characteristics
                                            diagnosis: Healthy control; gender: Unknown; smoker: Unknown
                                            Description
                                            Not reported
                                            Indexed organism evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Indexed assay evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Source
                                            GEO
                                            Original indexed metadata
                                            sample_accession: GSM901325
                                            sample_title: 08SE1911_Healthy control
                                            source_name: Intestinal biopsy
                                            characteristics: diagnosis: Healthy control; gender: Unknown; smoker: Unknown

                                            GSM901326

                                            Uncertain

                                            08SE1892_Crohn's Disease

                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                            Requirements and decision evidence
                                            • organism: Homo sapiens — Insufficient evidence
                                              • The required value is not reported.
                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                • The required value is not reported.
                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                  • The required value is not reported.
                                                  • 08SE1892_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                  • 08SE1892_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                    • The required value is not reported.
                                                    • 08SE1892_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                    • 08SE1892_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                  Source metadata
                                                  Source name
                                                  Intestinal biopsy
                                                  Characteristics
                                                  diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                  Description
                                                  Not reported
                                                  Indexed organism evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Indexed assay evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Source
                                                  GEO
                                                  Original indexed metadata
                                                  sample_accession: GSM901326
                                                  sample_title: 08SE1892_Crohn's Disease
                                                  source_name: Intestinal biopsy
                                                  characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: Yes

                                                  GSM901327

                                                  Uncertain

                                                  08SE1893_Crohn's Disease

                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                  Requirements and decision evidence
                                                  • organism: Homo sapiens — Insufficient evidence
                                                    • The required value is not reported.
                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                      • The required value is not reported.
                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                        • The required value is not reported.
                                                        • 08SE1893_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                        • 08SE1893_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                        • Supported by the indexed evidence.
                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                          • The required value is not reported.
                                                          • 08SE1893_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                          • 08SE1893_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                        Source metadata
                                                        Source name
                                                        Intestinal biopsy
                                                        Characteristics
                                                        diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                        Description
                                                        Not reported
                                                        Indexed organism evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Indexed assay evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Source
                                                        GEO
                                                        Original indexed metadata
                                                        sample_accession: GSM901327
                                                        sample_title: 08SE1893_Crohn's Disease
                                                        source_name: Intestinal biopsy
                                                        characteristics: diagnosis: Crohn's Disease; gender: Female; smoker: No

                                                        GSM901328

                                                        Uncertain

                                                        08SE1894_Crohn's Disease

                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                        Requirements and decision evidence
                                                        • organism: Homo sapiens — Insufficient evidence
                                                          • The required value is not reported.
                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                            • The required value is not reported.
                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                              • The required value is not reported.
                                                              • 08SE1894_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                              • 08SE1894_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                • The required value is not reported.
                                                                • 08SE1894_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                • 08SE1894_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                              Source metadata
                                                              Source name
                                                              Intestinal biopsy
                                                              Characteristics
                                                              diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM901328
                                                              sample_title: 08SE1894_Crohn's Disease
                                                              source_name: Intestinal biopsy
                                                              characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: No

                                                              GSM901329

                                                              Uncertain

                                                              08SE1895_Crohn's Disease

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • 08SE1895_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                    • 08SE1895_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                    • Supported by the indexed evidence.
                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • 08SE1895_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                      • 08SE1895_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                    Source metadata
                                                                    Source name
                                                                    Intestinal biopsy
                                                                    Characteristics
                                                                    diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                    Description
                                                                    Not reported
                                                                    Indexed organism evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Indexed assay evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Source
                                                                    GEO
                                                                    Original indexed metadata
                                                                    sample_accession: GSM901329
                                                                    sample_title: 08SE1895_Crohn's Disease
                                                                    source_name: Intestinal biopsy
                                                                    characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: No

                                                                    GSM901330

                                                                    Uncertain

                                                                    08SE1896_Crohn's Disease

                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                    Requirements and decision evidence
                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                        • The required value is not reported.
                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • 08SE1896_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                          • 08SE1896_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                          • Supported by the indexed evidence.
                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • 08SE1896_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                            • 08SE1896_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                          Source metadata
                                                                          Source name
                                                                          Intestinal biopsy
                                                                          Characteristics
                                                                          diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                          Description
                                                                          Not reported
                                                                          Indexed organism evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Indexed assay evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Source
                                                                          GEO
                                                                          Original indexed metadata
                                                                          sample_accession: GSM901330
                                                                          sample_title: 08SE1896_Crohn's Disease
                                                                          source_name: Intestinal biopsy
                                                                          characteristics: diagnosis: Crohn's Disease; gender: Female; smoker: No

                                                                          GSM901331

                                                                          Uncertain

                                                                          08SE1897_Crohn's Disease

                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                          Requirements and decision evidence
                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                • The required value is not reported.
                                                                                • 08SE1897_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                • 08SE1897_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • 08SE1897_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                  • 08SE1897_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                Source metadata
                                                                                Source name
                                                                                Intestinal biopsy
                                                                                Characteristics
                                                                                diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                Description
                                                                                Not reported
                                                                                Indexed organism evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Indexed assay evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Source
                                                                                GEO
                                                                                Original indexed metadata
                                                                                sample_accession: GSM901331
                                                                                sample_title: 08SE1897_Crohn's Disease
                                                                                source_name: Intestinal biopsy
                                                                                characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: Yes

                                                                                GSM901332

                                                                                Uncertain

                                                                                08SE1898_Crohn's Disease

                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                Requirements and decision evidence
                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • 08SE1898_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                      • 08SE1898_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                      • Supported by the indexed evidence.
                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • 08SE1898_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                        • 08SE1898_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                      Source metadata
                                                                                      Source name
                                                                                      Intestinal biopsy
                                                                                      Characteristics
                                                                                      diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                      Description
                                                                                      Not reported
                                                                                      Indexed organism evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Indexed assay evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Source
                                                                                      GEO
                                                                                      Original indexed metadata
                                                                                      sample_accession: GSM901332
                                                                                      sample_title: 08SE1898_Crohn's Disease
                                                                                      source_name: Intestinal biopsy
                                                                                      characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: Yes

                                                                                      GSM901333

                                                                                      Uncertain

                                                                                      08SE1899_Crohn's Disease

                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                      Requirements and decision evidence
                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                          • The required value is not reported.
                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                            • The required value is not reported.
                                                                                            • 08SE1899_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                            • 08SE1899_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • 08SE1899_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                              • 08SE1899_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                            Source metadata
                                                                                            Source name
                                                                                            Intestinal biopsy
                                                                                            Characteristics
                                                                                            diagnosis: Crohn's Disease; gender: Male; smoker: Yes
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM901333
                                                                                            sample_title: 08SE1899_Crohn's Disease
                                                                                            source_name: Intestinal biopsy
                                                                                            characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: Yes

                                                                                            GSM901334

                                                                                            Uncertain

                                                                                            08SE1900_Crohn's Disease

                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • 08SE1900_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                  • 08SE1900_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                  • Supported by the indexed evidence.
                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • 08SE1900_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                    • 08SE1900_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                  Source metadata
                                                                                                  Source name
                                                                                                  Intestinal biopsy
                                                                                                  Characteristics
                                                                                                  diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                  Description
                                                                                                  Not reported
                                                                                                  Indexed organism evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Indexed assay evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Source
                                                                                                  GEO
                                                                                                  Original indexed metadata
                                                                                                  sample_accession: GSM901334
                                                                                                  sample_title: 08SE1900_Crohn's Disease
                                                                                                  source_name: Intestinal biopsy
                                                                                                  characteristics: diagnosis: Crohn's Disease; gender: Female; smoker: No

                                                                                                  GSM901335

                                                                                                  Uncertain

                                                                                                  08SE1901_Crohn's Disease

                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                  Requirements and decision evidence
                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                      • The required value is not reported.
                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • 08SE1901_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                        • 08SE1901_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                        • Supported by the indexed evidence.
                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • 08SE1901_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                          • 08SE1901_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                        Source metadata
                                                                                                        Source name
                                                                                                        Intestinal biopsy
                                                                                                        Characteristics
                                                                                                        diagnosis: Crohn's Disease; gender: Female; smoker: No
                                                                                                        Description
                                                                                                        Not reported
                                                                                                        Indexed organism evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Indexed assay evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Source
                                                                                                        GEO
                                                                                                        Original indexed metadata
                                                                                                        sample_accession: GSM901335
                                                                                                        sample_title: 08SE1901_Crohn's Disease
                                                                                                        source_name: Intestinal biopsy
                                                                                                        characteristics: diagnosis: Crohn's Disease; gender: Female; smoker: No

                                                                                                        GSM901336

                                                                                                        Uncertain

                                                                                                        08SE1912_Crohn's Disease

                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                        Requirements and decision evidence
                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                              • The required value is not reported.
                                                                                                              • 08SE1912_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                              • 08SE1912_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • 08SE1912_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                • 08SE1912_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                              Source metadata
                                                                                                              Source name
                                                                                                              Intestinal biopsy
                                                                                                              Characteristics
                                                                                                              diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                              Description
                                                                                                              Not reported
                                                                                                              Indexed organism evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Indexed assay evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Source
                                                                                                              GEO
                                                                                                              Original indexed metadata
                                                                                                              sample_accession: GSM901336
                                                                                                              sample_title: 08SE1912_Crohn's Disease
                                                                                                              source_name: Intestinal biopsy
                                                                                                              characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: No

                                                                                                              GSM901337

                                                                                                              Uncertain

                                                                                                              08SE1914_Crohn's Disease

                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                              Requirements and decision evidence
                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • 08SE1914_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                    • 08SE1914_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                    • Supported by the indexed evidence.
                                                                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • 08SE1914_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                      • 08SE1914_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                    Source metadata
                                                                                                                    Source name
                                                                                                                    Intestinal biopsy
                                                                                                                    Characteristics
                                                                                                                    diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                    Description
                                                                                                                    Not reported
                                                                                                                    Indexed organism evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Indexed assay evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Source
                                                                                                                    GEO
                                                                                                                    Original indexed metadata
                                                                                                                    sample_accession: GSM901337
                                                                                                                    sample_title: 08SE1914_Crohn's Disease
                                                                                                                    source_name: Intestinal biopsy
                                                                                                                    characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: No

                                                                                                                    GSM901338

                                                                                                                    Uncertain

                                                                                                                    08SE1915_Crohn's Disease

                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                    Requirements and decision evidence
                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                        • The required value is not reported.
                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                          • The required value is not reported.
                                                                                                                          • 08SE1915_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                          • 08SE1915_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • 08SE1915_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                            • 08SE1915_Crohn's Disease Intestinal biopsy diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                          Source metadata
                                                                                                                          Source name
                                                                                                                          Intestinal biopsy
                                                                                                                          Characteristics
                                                                                                                          diagnosis: Crohn's Disease; gender: Male; smoker: No
                                                                                                                          Description
                                                                                                                          Not reported
                                                                                                                          Indexed organism evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Indexed assay evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Source
                                                                                                                          GEO
                                                                                                                          Original indexed metadata
                                                                                                                          sample_accession: GSM901338
                                                                                                                          sample_title: 08SE1915_Crohn's Disease
                                                                                                                          source_name: Intestinal biopsy
                                                                                                                          characteristics: diagnosis: Crohn's Disease; gender: Male; smoker: No

                                                                                                                          GSM901339

                                                                                                                          Uncertain

                                                                                                                          08SE1878_Ulcerative colitis

                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                          Requirements and decision evidence
                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                              • The required value is not reported.
                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                • The required value is not reported.
                                                                                                                                • 08SE1878_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                • 08SE1878_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                  • The required value is not reported.
                                                                                                                                  • 08SE1878_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                  • 08SE1878_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                Source metadata
                                                                                                                                Source name
                                                                                                                                Intestinal biopsy
                                                                                                                                Characteristics
                                                                                                                                diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                Description
                                                                                                                                Not reported
                                                                                                                                Indexed organism evidence
                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                Indexed assay evidence
                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                Source
                                                                                                                                GEO
                                                                                                                                Original indexed metadata
                                                                                                                                sample_accession: GSM901339
                                                                                                                                sample_title: 08SE1878_Ulcerative colitis
                                                                                                                                source_name: Intestinal biopsy
                                                                                                                                characteristics: diagnosis: Ulcerative colitis; gender: Female; smoker: No

                                                                                                                                GSM901340

                                                                                                                                Uncertain

                                                                                                                                08SE1879_Ulcerative colitis

                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                Requirements and decision evidence
                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                  • The required value is not reported.
                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                    • The required value is not reported.
                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                      • The required value is not reported.
                                                                                                                                      • 08SE1879_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                      • 08SE1879_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • 08SE1879_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                        • 08SE1879_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                      Source metadata
                                                                                                                                      Source name
                                                                                                                                      Intestinal biopsy
                                                                                                                                      Characteristics
                                                                                                                                      diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                      Description
                                                                                                                                      Not reported
                                                                                                                                      Indexed organism evidence
                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                      Indexed assay evidence
                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                      Source
                                                                                                                                      GEO
                                                                                                                                      Original indexed metadata
                                                                                                                                      sample_accession: GSM901340
                                                                                                                                      sample_title: 08SE1879_Ulcerative colitis
                                                                                                                                      source_name: Intestinal biopsy
                                                                                                                                      characteristics: diagnosis: Ulcerative colitis; gender: Male; smoker: No

                                                                                                                                      GSM901341

                                                                                                                                      Uncertain

                                                                                                                                      08SE1880_Ulcerative colitis

                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                      Requirements and decision evidence
                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                          • The required value is not reported.
                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                            • The required value is not reported.
                                                                                                                                            • 08SE1880_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: Yes
                                                                                                                                            • 08SE1880_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: Yes
                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                              • The required value is not reported.
                                                                                                                                              • 08SE1880_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: Yes
                                                                                                                                              • 08SE1880_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: Yes
                                                                                                                                            Source metadata
                                                                                                                                            Source name
                                                                                                                                            Intestinal biopsy
                                                                                                                                            Characteristics
                                                                                                                                            diagnosis: Ulcerative colitis; gender: Male; smoker: Yes
                                                                                                                                            Description
                                                                                                                                            Not reported
                                                                                                                                            Indexed organism evidence
                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                            Indexed assay evidence
                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                            Source
                                                                                                                                            GEO
                                                                                                                                            Original indexed metadata
                                                                                                                                            sample_accession: GSM901341
                                                                                                                                            sample_title: 08SE1880_Ulcerative colitis
                                                                                                                                            source_name: Intestinal biopsy
                                                                                                                                            characteristics: diagnosis: Ulcerative colitis; gender: Male; smoker: Yes

                                                                                                                                            GSM901342

                                                                                                                                            Uncertain

                                                                                                                                            08SE1881_Ulcerative colitis

                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                            Requirements and decision evidence
                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                              • The required value is not reported.
                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                • The required value is not reported.
                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                  • The required value is not reported.
                                                                                                                                                  • 08SE1881_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                  • 08SE1881_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • 08SE1881_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                    • 08SE1881_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                  Source metadata
                                                                                                                                                  Source name
                                                                                                                                                  Intestinal biopsy
                                                                                                                                                  Characteristics
                                                                                                                                                  diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                  Description
                                                                                                                                                  Not reported
                                                                                                                                                  Indexed organism evidence
                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                  Indexed assay evidence
                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                  Source
                                                                                                                                                  GEO
                                                                                                                                                  Original indexed metadata
                                                                                                                                                  sample_accession: GSM901342
                                                                                                                                                  sample_title: 08SE1881_Ulcerative colitis
                                                                                                                                                  source_name: Intestinal biopsy
                                                                                                                                                  characteristics: diagnosis: Ulcerative colitis; gender: Female; smoker: No

                                                                                                                                                  GSM901343

                                                                                                                                                  Uncertain

                                                                                                                                                  08SE1882_Ulcerative colitis

                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                      • The required value is not reported.
                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                        • The required value is not reported.
                                                                                                                                                        • 08SE1882_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                        • 08SE1882_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • 08SE1882_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                          • 08SE1882_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                        Source metadata
                                                                                                                                                        Source name
                                                                                                                                                        Intestinal biopsy
                                                                                                                                                        Characteristics
                                                                                                                                                        diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                        Description
                                                                                                                                                        Not reported
                                                                                                                                                        Indexed organism evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Indexed assay evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Source
                                                                                                                                                        GEO
                                                                                                                                                        Original indexed metadata
                                                                                                                                                        sample_accession: GSM901343
                                                                                                                                                        sample_title: 08SE1882_Ulcerative colitis
                                                                                                                                                        source_name: Intestinal biopsy
                                                                                                                                                        characteristics: diagnosis: Ulcerative colitis; gender: Female; smoker: No

                                                                                                                                                        GSM901344

                                                                                                                                                        Uncertain

                                                                                                                                                        08SE1883_Ulcerative colitis

                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                            • The required value is not reported.
                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                              • The required value is not reported.
                                                                                                                                                              • 08SE1883_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                              • 08SE1883_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                • 08SE1883_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                • 08SE1883_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                              Source metadata
                                                                                                                                                              Source name
                                                                                                                                                              Intestinal biopsy
                                                                                                                                                              Characteristics
                                                                                                                                                              diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                              Description
                                                                                                                                                              Not reported
                                                                                                                                                              Indexed organism evidence
                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                              Indexed assay evidence
                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                              Source
                                                                                                                                                              GEO
                                                                                                                                                              Original indexed metadata
                                                                                                                                                              sample_accession: GSM901344
                                                                                                                                                              sample_title: 08SE1883_Ulcerative colitis
                                                                                                                                                              source_name: Intestinal biopsy
                                                                                                                                                              characteristics: diagnosis: Ulcerative colitis; gender: Male; smoker: No

                                                                                                                                                              GSM901345

                                                                                                                                                              Uncertain

                                                                                                                                                              08SE1884_Ulcerative colitis

                                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                              Requirements and decision evidence
                                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                    • 08SE1884_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                    • 08SE1884_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • 08SE1884_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                      • 08SE1884_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                    Source metadata
                                                                                                                                                                    Source name
                                                                                                                                                                    Intestinal biopsy
                                                                                                                                                                    Characteristics
                                                                                                                                                                    diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                    Description
                                                                                                                                                                    Not reported
                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                    Source
                                                                                                                                                                    GEO
                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                    sample_accession: GSM901345
                                                                                                                                                                    sample_title: 08SE1884_Ulcerative colitis
                                                                                                                                                                    source_name: Intestinal biopsy
                                                                                                                                                                    characteristics: diagnosis: Ulcerative colitis; gender: Male; smoker: No

                                                                                                                                                                    GSM901346

                                                                                                                                                                    Uncertain

                                                                                                                                                                    08SE1885_Ulcerative colitis

                                                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                    Requirements and decision evidence
                                                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                          • 08SE1885_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                          • 08SE1885_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                            • 08SE1885_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                            • 08SE1885_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                          Source metadata
                                                                                                                                                                          Source name
                                                                                                                                                                          Intestinal biopsy
                                                                                                                                                                          Characteristics
                                                                                                                                                                          diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                          Description
                                                                                                                                                                          Not reported
                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                          Source
                                                                                                                                                                          GEO
                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                          sample_accession: GSM901346
                                                                                                                                                                          sample_title: 08SE1885_Ulcerative colitis
                                                                                                                                                                          source_name: Intestinal biopsy
                                                                                                                                                                          characteristics: diagnosis: Ulcerative colitis; gender: Male; smoker: No

                                                                                                                                                                          GSM901347

                                                                                                                                                                          Uncertain

                                                                                                                                                                          08SE1886_Ulcerative colitis

                                                                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                          Requirements and decision evidence
                                                                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                • 08SE1886_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                • 08SE1886_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • 08SE1886_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                  • 08SE1886_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                Source metadata
                                                                                                                                                                                Source name
                                                                                                                                                                                Intestinal biopsy
                                                                                                                                                                                Characteristics
                                                                                                                                                                                diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                Description
                                                                                                                                                                                Not reported
                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                Source
                                                                                                                                                                                GEO
                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                sample_accession: GSM901347
                                                                                                                                                                                sample_title: 08SE1886_Ulcerative colitis
                                                                                                                                                                                source_name: Intestinal biopsy
                                                                                                                                                                                characteristics: diagnosis: Ulcerative colitis; gender: Female; smoker: No

                                                                                                                                                                                GSM901348

                                                                                                                                                                                Uncertain

                                                                                                                                                                                08SE1887_Ulcerative colitis

                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                      • 08SE1887_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                      • 08SE1887_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                        • 08SE1887_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                        • 08SE1887_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                      Source metadata
                                                                                                                                                                                      Source name
                                                                                                                                                                                      Intestinal biopsy
                                                                                                                                                                                      Characteristics
                                                                                                                                                                                      diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                      Description
                                                                                                                                                                                      Not reported
                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Source
                                                                                                                                                                                      GEO
                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                      sample_accession: GSM901348
                                                                                                                                                                                      sample_title: 08SE1887_Ulcerative colitis
                                                                                                                                                                                      source_name: Intestinal biopsy
                                                                                                                                                                                      characteristics: diagnosis: Ulcerative colitis; gender: Male; smoker: No

                                                                                                                                                                                      GSM901349

                                                                                                                                                                                      Uncertain

                                                                                                                                                                                      08SE1888_Ulcerative colitis

                                                                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                      Requirements and decision evidence
                                                                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                            • 08SE1888_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                            • 08SE1888_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                              • 08SE1888_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                              • 08SE1888_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                            Source metadata
                                                                                                                                                                                            Source name
                                                                                                                                                                                            Intestinal biopsy
                                                                                                                                                                                            Characteristics
                                                                                                                                                                                            diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                            Description
                                                                                                                                                                                            Not reported
                                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                            Source
                                                                                                                                                                                            GEO
                                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                                            sample_accession: GSM901349
                                                                                                                                                                                            sample_title: 08SE1888_Ulcerative colitis
                                                                                                                                                                                            source_name: Intestinal biopsy
                                                                                                                                                                                            characteristics: diagnosis: Ulcerative colitis; gender: Male; smoker: No

                                                                                                                                                                                            GSM901350

                                                                                                                                                                                            Uncertain

                                                                                                                                                                                            08SE1889_Ulcerative colitis

                                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                  • 08SE1889_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                  • 08SE1889_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                    • 08SE1889_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                    • 08SE1889_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                  Source metadata
                                                                                                                                                                                                  Source name
                                                                                                                                                                                                  Intestinal biopsy
                                                                                                                                                                                                  Characteristics
                                                                                                                                                                                                  diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                  Description
                                                                                                                                                                                                  Not reported
                                                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                  Source
                                                                                                                                                                                                  GEO
                                                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                                                  sample_accession: GSM901350
                                                                                                                                                                                                  sample_title: 08SE1889_Ulcerative colitis
                                                                                                                                                                                                  source_name: Intestinal biopsy
                                                                                                                                                                                                  characteristics: diagnosis: Ulcerative colitis; gender: Female; smoker: No

                                                                                                                                                                                                  GSM901351

                                                                                                                                                                                                  Uncertain

                                                                                                                                                                                                  08SE1890_Ulcerative colitis

                                                                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                        • 08SE1890_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                        • 08SE1890_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                          • 08SE1890_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                          • 08SE1890_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                        Source metadata
                                                                                                                                                                                                        Source name
                                                                                                                                                                                                        Intestinal biopsy
                                                                                                                                                                                                        Characteristics
                                                                                                                                                                                                        diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                        Description
                                                                                                                                                                                                        Not reported
                                                                                                                                                                                                        Indexed organism evidence
                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                        Indexed assay evidence
                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                        Source
                                                                                                                                                                                                        GEO
                                                                                                                                                                                                        Original indexed metadata
                                                                                                                                                                                                        sample_accession: GSM901351
                                                                                                                                                                                                        sample_title: 08SE1890_Ulcerative colitis
                                                                                                                                                                                                        source_name: Intestinal biopsy
                                                                                                                                                                                                        characteristics: diagnosis: Ulcerative colitis; gender: Female; smoker: No

                                                                                                                                                                                                        GSM901352

                                                                                                                                                                                                        Uncertain

                                                                                                                                                                                                        08SE1891_Ulcerative colitis

                                                                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                              • 08SE1891_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                              • 08SE1891_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                • 08SE1891_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                                • 08SE1891_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                              Source metadata
                                                                                                                                                                                                              Source name
                                                                                                                                                                                                              Intestinal biopsy
                                                                                                                                                                                                              Characteristics
                                                                                                                                                                                                              diagnosis: Ulcerative colitis; gender: Female; smoker: No
                                                                                                                                                                                                              Description
                                                                                                                                                                                                              Not reported
                                                                                                                                                                                                              Indexed organism evidence
                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                              Indexed assay evidence
                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                              Source
                                                                                                                                                                                                              GEO
                                                                                                                                                                                                              Original indexed metadata
                                                                                                                                                                                                              sample_accession: GSM901352
                                                                                                                                                                                                              sample_title: 08SE1891_Ulcerative colitis
                                                                                                                                                                                                              source_name: Intestinal biopsy
                                                                                                                                                                                                              characteristics: diagnosis: Ulcerative colitis; gender: Female; smoker: No

                                                                                                                                                                                                              GSM901353

                                                                                                                                                                                                              Uncertain

                                                                                                                                                                                                              08SE1913_Ulcerative colitis

                                                                                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                              Requirements and decision evidence
                                                                                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                    • 08SE1913_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                                                    • 08SE1913_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                      • 08SE1913_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                                                      • 08SE1913_Ulcerative colitis Intestinal biopsy diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                                                    Source metadata
                                                                                                                                                                                                                    Source name
                                                                                                                                                                                                                    Intestinal biopsy
                                                                                                                                                                                                                    Characteristics
                                                                                                                                                                                                                    diagnosis: Ulcerative colitis; gender: Male; smoker: No
                                                                                                                                                                                                                    Description
                                                                                                                                                                                                                    Not reported
                                                                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                    Source
                                                                                                                                                                                                                    GEO
                                                                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                                                                    sample_accession: GSM901353
                                                                                                                                                                                                                    sample_title: 08SE1913_Ulcerative colitis
                                                                                                                                                                                                                    source_name: Intestinal biopsy
                                                                                                                                                                                                                    characteristics: diagnosis: Ulcerative colitis; gender: Male; smoker: No

                                                                                                                                                                                                                    Excluded samples (0)

                                                                                                                                                                                                                    No excluded samples.