GSE4183 matching samples

GSM95473

Uncertain

colon_normal_1024

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_normal_1024 colon biopsy biopsy specimen
- colon_normal_1024 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_normal_1024 colon biopsy biopsy specimen
- colon_normal_1024 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95473
sample_title: colon_normal_1024
source_name: colon biopsy
characteristics: biopsy specimen

GSM95474

Uncertain

colon_normal_1081

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_normal_1081 colon biopsy biopsy specimen
- colon_normal_1081 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_normal_1081 colon biopsy biopsy specimen
- colon_normal_1081 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95474
sample_title: colon_normal_1081
source_name: colon biopsy
characteristics: biopsy specimen

GSM95475

Uncertain

colon_normal_1114

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_normal_1114 colon biopsy biopsy specimen
- colon_normal_1114 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_normal_1114 colon biopsy biopsy specimen
- colon_normal_1114 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95475
sample_title: colon_normal_1114
source_name: colon biopsy
characteristics: biopsy specimen

GSM95476

Uncertain

colon_normal_1122

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_normal_1122 colon biopsy biopsy specimen
- colon_normal_1122 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_normal_1122 colon biopsy biopsy specimen
- colon_normal_1122 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95476
sample_title: colon_normal_1122
source_name: colon biopsy
characteristics: biopsy specimen

GSM95477

Uncertain

colon_normal_1357

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_normal_1357 colon biopsy biopsy specimen
- colon_normal_1357 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_normal_1357 colon biopsy biopsy specimen
- colon_normal_1357 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95477
sample_title: colon_normal_1357
source_name: colon biopsy
characteristics: biopsy specimen

GSM95478

Uncertain

colon_normal_1431

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_normal_1431 colon biopsy biopsy specimen
- colon_normal_1431 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_normal_1431 colon biopsy biopsy specimen
- colon_normal_1431 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95478
sample_title: colon_normal_1431
source_name: colon biopsy
characteristics: biopsy specimen

GSM95479

Uncertain

colon_normal_1440

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_normal_1440 colon biopsy biopsy specimen
- colon_normal_1440 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_normal_1440 colon biopsy biopsy specimen
- colon_normal_1440 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95479
sample_title: colon_normal_1440
source_name: colon biopsy
characteristics: biopsy specimen

GSM95480

Uncertain

colon_normal_1456

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_normal_1456 colon biopsy biopsy specimen
- colon_normal_1456 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_normal_1456 colon biopsy biopsy specimen
- colon_normal_1456 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95480
sample_title: colon_normal_1456
source_name: colon biopsy
characteristics: biopsy specimen

GSM95481

Uncertain

colon_adenoma_1115

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1115 colon biopsy biopsy specimen
- colon_adenoma_1115 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1115 colon biopsy biopsy specimen
- colon_adenoma_1115 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1115 colon biopsy biopsy specimen
- colon_adenoma_1115 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1115 colon biopsy biopsy specimen
- colon_adenoma_1115 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95481
sample_title: colon_adenoma_1115
source_name: colon biopsy
characteristics: biopsy specimen

GSM95482

Uncertain

colon_adenoma_1138

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1138 colon biopsy biopsy specimen
- colon_adenoma_1138 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1138 colon biopsy biopsy specimen
- colon_adenoma_1138 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1138 colon biopsy biopsy specimen
- colon_adenoma_1138 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1138 colon biopsy biopsy specimen
- colon_adenoma_1138 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95482
sample_title: colon_adenoma_1138
source_name: colon biopsy
characteristics: biopsy specimen

GSM95483

Uncertain

colon_adenoma_1141

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1141 colon biopsy biopsy specimen
- colon_adenoma_1141 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1141 colon biopsy biopsy specimen
- colon_adenoma_1141 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1141 colon biopsy biopsy specimen
- colon_adenoma_1141 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1141 colon biopsy biopsy specimen
- colon_adenoma_1141 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95483
sample_title: colon_adenoma_1141
source_name: colon biopsy
characteristics: biopsy specimen

GSM95484

Uncertain

colon_adenoma_1154

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1154 colon biopsy biopsy specimen
- colon_adenoma_1154 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1154 colon biopsy biopsy specimen
- colon_adenoma_1154 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1154 colon biopsy biopsy specimen
- colon_adenoma_1154 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1154 colon biopsy biopsy specimen
- colon_adenoma_1154 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95484
sample_title: colon_adenoma_1154
source_name: colon biopsy
characteristics: biopsy specimen

GSM95485

Uncertain

colon_adenoma_1187

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1187 colon biopsy biopsy specimen
- colon_adenoma_1187 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1187 colon biopsy biopsy specimen
- colon_adenoma_1187 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1187 colon biopsy biopsy specimen
- colon_adenoma_1187 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1187 colon biopsy biopsy specimen
- colon_adenoma_1187 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95485
sample_title: colon_adenoma_1187
source_name: colon biopsy
characteristics: biopsy specimen

GSM95486

Uncertain

colon_adenoma_1312

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1312 colon biopsy biopsy specimen
- colon_adenoma_1312 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1312 colon biopsy biopsy specimen
- colon_adenoma_1312 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1312 colon biopsy biopsy specimen
- colon_adenoma_1312 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1312 colon biopsy biopsy specimen
- colon_adenoma_1312 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95486
sample_title: colon_adenoma_1312
source_name: colon biopsy
characteristics: biopsy specimen

GSM95487

Uncertain

colon_adenoma_1419

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1419 colon biopsy biopsy specimen
- colon_adenoma_1419 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1419 colon biopsy biopsy specimen
- colon_adenoma_1419 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1419 colon biopsy biopsy specimen
- colon_adenoma_1419 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1419 colon biopsy biopsy specimen
- colon_adenoma_1419 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95487
sample_title: colon_adenoma_1419
source_name: colon biopsy
characteristics: biopsy specimen

GSM95488

Uncertain

colon_adenoma_1700

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1700 colon biopsy biopsy specimen
- colon_adenoma_1700 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1700 colon biopsy biopsy specimen
- colon_adenoma_1700 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1700 colon biopsy biopsy specimen
- colon_adenoma_1700 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1700 colon biopsy biopsy specimen
- colon_adenoma_1700 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95488
sample_title: colon_adenoma_1700
source_name: colon biopsy
characteristics: biopsy specimen

GSM95489

Uncertain

colon_adenoma_1748

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1748 colon biopsy biopsy specimen
- colon_adenoma_1748 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1748 colon biopsy biopsy specimen
- colon_adenoma_1748 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1748 colon biopsy biopsy specimen
- colon_adenoma_1748 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1748 colon biopsy biopsy specimen
- colon_adenoma_1748 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95489
sample_title: colon_adenoma_1748
source_name: colon biopsy
characteristics: biopsy specimen

GSM95490

Uncertain

colon_adenoma_1830

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1830 colon biopsy biopsy specimen
- colon_adenoma_1830 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1830 colon biopsy biopsy specimen
- colon_adenoma_1830 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1830 colon biopsy biopsy specimen
- colon_adenoma_1830 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1830 colon biopsy biopsy specimen
- colon_adenoma_1830 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95490
sample_title: colon_adenoma_1830
source_name: colon biopsy
characteristics: biopsy specimen

GSM95491

Uncertain

colon_adenoma_1832

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1832 colon biopsy biopsy specimen
- colon_adenoma_1832 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1832 colon biopsy biopsy specimen
- colon_adenoma_1832 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1832 colon biopsy biopsy specimen
- colon_adenoma_1832 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_1832 colon biopsy biopsy specimen
- colon_adenoma_1832 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95491
sample_title: colon_adenoma_1832
source_name: colon biopsy
characteristics: biopsy specimen

GSM95492

Uncertain

colon_adenoma_956

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_956 colon biopsy biopsy specimen
- colon_adenoma_956 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_956 colon biopsy biopsy specimen
- colon_adenoma_956 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_956 colon biopsy biopsy specimen
- colon_adenoma_956 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_956 colon biopsy biopsy specimen
- colon_adenoma_956 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95492
sample_title: colon_adenoma_956
source_name: colon biopsy
characteristics: biopsy specimen

GSM95493

Uncertain

colon_adenoma_980

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_980 colon biopsy biopsy specimen
- colon_adenoma_980 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_980 colon biopsy biopsy specimen
- colon_adenoma_980 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_980 colon biopsy biopsy specimen
- colon_adenoma_980 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_980 colon biopsy biopsy specimen
- colon_adenoma_980 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95493
sample_title: colon_adenoma_980
source_name: colon biopsy
characteristics: biopsy specimen

GSM95494

Uncertain

colon_adenoma_983

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_983 colon biopsy biopsy specimen
- colon_adenoma_983 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_983 colon biopsy biopsy specimen
- colon_adenoma_983 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_983 colon biopsy biopsy specimen
- colon_adenoma_983 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_983 colon biopsy biopsy specimen
- colon_adenoma_983 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95494
sample_title: colon_adenoma_983
source_name: colon biopsy
characteristics: biopsy specimen

GSM95495

Uncertain

colon_adenoma_995

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_995 colon biopsy biopsy specimen
- colon_adenoma_995 colon biopsy biopsy specimen
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_995 colon biopsy biopsy specimen
- colon_adenoma_995 colon biopsy biopsy specimen
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_adenoma_995 colon biopsy biopsy specimen
- colon_adenoma_995 colon biopsy biopsy specimen
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_adenoma_995 colon biopsy biopsy specimen
- colon_adenoma_995 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95495
sample_title: colon_adenoma_995
source_name: colon biopsy
characteristics: biopsy specimen

GSM95496

Uncertain

colon_CRC_1146

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1146 colon biopsy biopsy specimen
- colon_CRC_1146 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1146 colon biopsy biopsy specimen
- colon_CRC_1146 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95496
sample_title: colon_CRC_1146
source_name: colon biopsy
characteristics: biopsy specimen

GSM95497

Uncertain

colon_CRC_1158

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1158 colon biopsy biopsy specimen
- colon_CRC_1158 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1158 colon biopsy biopsy specimen
- colon_CRC_1158 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95497
sample_title: colon_CRC_1158
source_name: colon biopsy
characteristics: biopsy specimen

GSM95498

Uncertain

colon_CRC_1293

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1293 colon biopsy biopsy specimen
- colon_CRC_1293 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1293 colon biopsy biopsy specimen
- colon_CRC_1293 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95498
sample_title: colon_CRC_1293
source_name: colon biopsy
characteristics: biopsy specimen

GSM95499

Uncertain

colon_CRC_1316

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1316 colon biopsy biopsy specimen
- colon_CRC_1316 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1316 colon biopsy biopsy specimen
- colon_CRC_1316 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95499
sample_title: colon_CRC_1316
source_name: colon biopsy
characteristics: biopsy specimen

GSM95500

Uncertain

colon_CRC_1377

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1377 colon biopsy biopsy specimen
- colon_CRC_1377 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1377 colon biopsy biopsy specimen
- colon_CRC_1377 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95500
sample_title: colon_CRC_1377
source_name: colon biopsy
characteristics: biopsy specimen

GSM95501

Uncertain

colon_CRC_1479

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1479 colon biopsy biopsy specimen
- colon_CRC_1479 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1479 colon biopsy biopsy specimen
- colon_CRC_1479 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95501
sample_title: colon_CRC_1479
source_name: colon biopsy
characteristics: biopsy specimen

GSM95502

Uncertain

colon_CRC_1486

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1486 colon biopsy biopsy specimen
- colon_CRC_1486 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1486 colon biopsy biopsy specimen
- colon_CRC_1486 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95502
sample_title: colon_CRC_1486
source_name: colon biopsy
characteristics: biopsy specimen

GSM95503

Uncertain

colon_CRC_1494

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1494 colon biopsy biopsy specimen
- colon_CRC_1494 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1494 colon biopsy biopsy specimen
- colon_CRC_1494 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95503
sample_title: colon_CRC_1494
source_name: colon biopsy
characteristics: biopsy specimen

GSM95504

Uncertain

colon_CRC_1499

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1499 colon biopsy biopsy specimen
- colon_CRC_1499 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1499 colon biopsy biopsy specimen
- colon_CRC_1499 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95504
sample_title: colon_CRC_1499
source_name: colon biopsy
characteristics: biopsy specimen

GSM95505

Uncertain

colon_CRC_1556

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1556 colon biopsy biopsy specimen
- colon_CRC_1556 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1556 colon biopsy biopsy specimen
- colon_CRC_1556 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95505
sample_title: colon_CRC_1556
source_name: colon biopsy
characteristics: biopsy specimen

GSM95506

Uncertain

colon_CRC_1651

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1651 colon biopsy biopsy specimen
- colon_CRC_1651 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1651 colon biopsy biopsy specimen
- colon_CRC_1651 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95506
sample_title: colon_CRC_1651
source_name: colon biopsy
characteristics: biopsy specimen

GSM95507

Uncertain

colon_CRC_1708

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1708 colon biopsy biopsy specimen
- colon_CRC_1708 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1708 colon biopsy biopsy specimen
- colon_CRC_1708 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95507
sample_title: colon_CRC_1708
source_name: colon biopsy
characteristics: biopsy specimen

GSM95508

Uncertain

colon_CRC_1739

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1739 colon biopsy biopsy specimen
- colon_CRC_1739 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1739 colon biopsy biopsy specimen
- colon_CRC_1739 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95508
sample_title: colon_CRC_1739
source_name: colon biopsy
characteristics: biopsy specimen

GSM95509

Uncertain

colon_CRC_1761

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1761 colon biopsy biopsy specimen
- colon_CRC_1761 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1761 colon biopsy biopsy specimen
- colon_CRC_1761 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95509
sample_title: colon_CRC_1761
source_name: colon biopsy
characteristics: biopsy specimen

GSM95510

Uncertain

colon_CRC_1883

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_CRC_1883 colon biopsy biopsy specimen
- colon_CRC_1883 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_CRC_1883 colon biopsy biopsy specimen
- colon_CRC_1883 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95510
sample_title: colon_CRC_1883
source_name: colon biopsy
characteristics: biopsy specimen

GSM95511

Uncertain

colon_IBD_1110

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1110 colon biopsy biopsy specimen
- colon_IBD_1110 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1110 colon biopsy biopsy specimen
- colon_IBD_1110 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95511
sample_title: colon_IBD_1110
source_name: colon biopsy
characteristics: biopsy specimen

GSM95512

Uncertain

colon_IBD_1118

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1118 colon biopsy biopsy specimen
- colon_IBD_1118 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1118 colon biopsy biopsy specimen
- colon_IBD_1118 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95512
sample_title: colon_IBD_1118
source_name: colon biopsy
characteristics: biopsy specimen

GSM95513

Uncertain

colon_IBD_1537

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1537 colon biopsy biopsy specimen
- colon_IBD_1537 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1537 colon biopsy biopsy specimen
- colon_IBD_1537 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95513
sample_title: colon_IBD_1537
source_name: colon biopsy
characteristics: biopsy specimen

GSM95514

Uncertain

colon_IBD_1670

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1670 colon biopsy biopsy specimen
- colon_IBD_1670 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1670 colon biopsy biopsy specimen
- colon_IBD_1670 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95514
sample_title: colon_IBD_1670
source_name: colon biopsy
characteristics: biopsy specimen

GSM95515

Uncertain

colon_IBD_1802

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1802 colon biopsy biopsy specimen
- colon_IBD_1802 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1802 colon biopsy biopsy specimen
- colon_IBD_1802 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95515
sample_title: colon_IBD_1802
source_name: colon biopsy
characteristics: biopsy specimen

GSM95516

Uncertain

colon_IBD_923

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_923 colon biopsy biopsy specimen
- colon_IBD_923 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_923 colon biopsy biopsy specimen
- colon_IBD_923 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95516
sample_title: colon_IBD_923
source_name: colon biopsy
characteristics: biopsy specimen

GSM95517

Uncertain

colon_IBD_1017

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1017 colon biopsy biopsy specimen
- colon_IBD_1017 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1017 colon biopsy biopsy specimen
- colon_IBD_1017 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95517
sample_title: colon_IBD_1017
source_name: colon biopsy
characteristics: biopsy specimen

GSM95518

Uncertain

colon_IBD_1060

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1060 colon biopsy biopsy specimen
- colon_IBD_1060 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1060 colon biopsy biopsy specimen
- colon_IBD_1060 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95518
sample_title: colon_IBD_1060
source_name: colon biopsy
characteristics: biopsy specimen

GSM95519

Uncertain

colon_IBD_1156

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1156 colon biopsy biopsy specimen
- colon_IBD_1156 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1156 colon biopsy biopsy specimen
- colon_IBD_1156 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95519
sample_title: colon_IBD_1156
source_name: colon biopsy
characteristics: biopsy specimen

GSM95520

Uncertain

colon_IBD_1175

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1175 colon biopsy biopsy specimen
- colon_IBD_1175 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1175 colon biopsy biopsy specimen
- colon_IBD_1175 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95520
sample_title: colon_IBD_1175
source_name: colon biopsy
characteristics: biopsy specimen

GSM95521

Uncertain

colon_IBD_1368

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1368 colon biopsy biopsy specimen
- colon_IBD_1368 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1368 colon biopsy biopsy specimen
- colon_IBD_1368 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95521
sample_title: colon_IBD_1368
source_name: colon biopsy
characteristics: biopsy specimen

GSM95522

Uncertain

colon_IBD_1533

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1533 colon biopsy biopsy specimen
- colon_IBD_1533 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1533 colon biopsy biopsy specimen
- colon_IBD_1533 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95522
sample_title: colon_IBD_1533
source_name: colon biopsy
characteristics: biopsy specimen

GSM95523

Uncertain

colon_IBD_1606

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1606 colon biopsy biopsy specimen
- colon_IBD_1606 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1606 colon biopsy biopsy specimen
- colon_IBD_1606 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95523
sample_title: colon_IBD_1606
source_name: colon biopsy
characteristics: biopsy specimen

GSM95524

Uncertain

colon_IBD_1665

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_1665 colon biopsy biopsy specimen
- colon_IBD_1665 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_1665 colon biopsy biopsy specimen
- colon_IBD_1665 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95524
sample_title: colon_IBD_1665
source_name: colon biopsy
characteristics: biopsy specimen

GSM95525

Uncertain

colon_IBD_939

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- colon_IBD_939 colon biopsy biopsy specimen
- colon_IBD_939 colon biopsy biopsy specimen
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- colon_IBD_939 colon biopsy biopsy specimen
- colon_IBD_939 colon biopsy biopsy specimen

Source metadata

Source name: colon biopsy
Characteristics: biopsy specimen
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM95525
sample_title: colon_IBD_939
source_name: colon biopsy
characteristics: biopsy specimen

Included samples (0)

Uncertain samples (53)

Excluded samples (0)