Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation [Jena]

Whole-study status Not suitable

Dataset does not meet the current suitability threshold.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

13 case / 10 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: microarray
Organism: Homo sapiens
Whole-study samples: 33 samples
Specimen: Tissue
Reported/interpreted study design: Disease/model vs control Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Woetzel D, Huber R, Kupfer P, Pohlers D, Pfaff M, Driesch D, Haeupl T, Koczan D, Stiehl P, Guthke R, Kinne RW
Contact name: Raimund W Kinne
Submission date: 2014-02-28
Last update: 2018-08-10
Organization: Jena University Hospital
Department: Department of Orthopedics
Public date: 2014-03-05
Experiment types: Expression profiling by array
Platforms: GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
Series type: Series
SubSeries: Not available
BioProject: PRJNA240150

Summary

Discrimination of rheumatoid arthritis (RA) patients from patients with other inflammatory/degenerative joint diseases or healthy individuals purely on the basis of genes differentially expressed in high-throughput data has proven very difficult. Thus, the present study sought to achieve such discrimination by employing a novel unbiased approach using rule-based classifiers. Three multi-center genome-wide transcriptomic data sets (Affymetrix HG- U133 A/B) from a total of 79 individuals, including 20 healthy controls (control group - CG), as well as 26 osteoarthritis (OA) and 33 RA patients, were used to infer rule- based classifiers to discriminate the disease groups. The rules were ranked with respect to Kiendl’s statistical relevance index, and the resulting rule set was optimized by pruning. The rule sets were inferred separately from data of one of three centers and applied to the two remaining centers for validation. All rules from the optimized rule sets of all centers were used to analyze their biological relevance applying the software Pathway Studio. The optimized rule sets for the three centers contained a total of 29, 20, and 8 rules (including 10, 8, and 4 rules for ‘RA’), respectively. The mean sensitivity for the prediction of RA based on six center-to-center tests was 96% (range 90% to 100%), that for OA 86% (range 40% to 100%). The mean specificity for RA prediction was 94% (range 80% to 100%), that for OA 96% (range 83.3% to 100%). The average overall accuracy of the three different rule-based classifiers was 91% (range 80% to 100%). Unbiased analyses by Pathway Studio of the gene sets obtained by discrimination of RA from OA and CG with rule-based classifiers resulted in the identification of the pathogenetically and/or therapeutically relevant interferon-gamma and GM-CSF pathways. First-time application of rule-based classifiers for the discrimination of RA resulted in high performance, with means for all assessment parameters close to or higher than 90%. In addition, this unbiased, new approach resulted in the identification not only of pathways known to be critical to RA, but also of novel molecules such as serine/threonine kinase 10.

Overall design

Three multi-center genome-wide transcriptomic data sets (Affymetrix HG- U133 A/B) from a total of 79 individuals, including 20 healthy controls (control group - CG), as well as 26 osteoarthritis (OA) and 33 RA patients, were used to infer rule- based classifiers to discriminate the disease groups. The rules were ranked with respect to Kiendl’s statistical relevance index, and the resulting rule set was optimized by pruning. The rule sets were inferred separately from data of one of three centers and applied to the two remaining centers for validation. All rules from the optimized rule sets of all centers were used to analyze their biological relevance applying the software Pathway Studio.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 33 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Planned source for curated expression experiment links.	No match found
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 21 linked publications 21 DOIs Primary publication Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation. Arthritis research & therapy, 2014 PubMed DOI Related publications Gender inequality in osteoarthritis: a bioinformatics perspective. Clinical rheumatology, 2026 PubMed DOI Identification of potential key efferocytosis-related genes in rheumatoid arthritis using machine learning. Clinical rheumatology, 2026 PubMed DOI CD27 Neutralization Attenuates Rheumatoid Arthritis by Suppressing. Biochemical genetics, 2026 PubMed DOI Integrating network toxicology, molecular docking and experimental validation reveals potential mechanisms of DEHP in osteoarthritis. Experimental gerontology, 2026 PubMed DOI G protein-coupled receptor-related genes matrix metallopeptidase 9 and tachykinin precursor 1 promote osteoarthritis progression and influence the immune microenvironment. International journal of biological macromolecules, 2025 PubMed DOI Identification of key pathways and biomarkers in rheumatoid arthritis synovial tissue through comprehensive transcriptomic integration. Journal of orthopaedics, 2026 PubMed DOI MSX2 serves as a chondroprotective factor in osteoarthritis: insights from expression analysis and functional validation studies. Experimental cell research, 2026 PubMed DOI Elucidation of hub cross-talk genes as potential biomarkers and drug prediction for chronic periodontitis and rheumatoid arthritis: A bioinformatics analysis. Medicine, 2025 PubMed DOI Analysis of key genes and pathways of knee osteoarthritis based on GEO data mining. Medicine, 2025 PubMed DOI Integrative transcriptomic analysis identifies synovium-derived biomarkers for OA-related synovitis and builds a validated diagnostic nomogram. Medicine, 2026 PubMed DOI Identification of Autophagy-Associated Molecular Signatures in Osteoarthritis Revealed by Integrative Multi-Omics and Experimental Validation. Chemical biology & drug design, 2026 PubMed DOI Programmed cell death-related gene S100A9 promotes macrophage M1 polarization and chondrocyte apoptosis in rheumatoid arthritis. Biology direct, 2026 PubMed DOI [Identification of efferocytosis-related genes in osteoarthritis and prediction of traditional Chinese medicines based on bioinformatics and machine learning]. Nan fang yi ke da xue xue bao = Journal of Southern Medical University, 2026 PubMed DOI Analysis of common differential gene expression between rheumatoid arthritis and ulcerative colitis. PloS one, 2026 PubMed DOI Identification of common genes and biomarkers between Dermatomyositis and rheumatoid arthritis through integrated bioinformatics. PloS one, 2026 PubMed DOI KIF11 promotes rheumatoid arthritis pathogenesis by activating M1 macrophage polarization and promoting inflammatory cytokine secretion. PloS one, 2026 PubMed DOI Integrated Bioinformatics and Experimental Validation Reveal Macrophage Polarization-Related Biomarkers for Osteoarthritis Diagnosis. Journal of multidisciplinary healthcare, 2025 PubMed DOI Single-Cell and Mendelian Randomization Analyses Identify Macrophage Polarization and Efferocytosis Biomarkers in Osteoarthritis and Reveal Their Regulatory Mechanisms. Iranian journal of biotechnology, 2026 PubMed DOI Immune cells with senescence-related transcriptional signatures orchestrate the inflammatory continuum in osteoarthritis synovium: a single-cell and machine learning study. Frontiers in immunology, 2026 PubMed DOI Mendelian Randomization and Transcriptome Analyses Reveal Important Roles for CEBPB and CX3CR1 in Osteoarthritis. Bioengineering (Basel, Switzerland), 2025 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

100 pts

Clarity: 100%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Review before analysis

85% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

3/15 pts

Unassigned or review-needed samples remain before analysis.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

10 samples are still unassigned.

Next Steps

Resolve unassigned or review-needed samples in the grouping table.

Analysis Preparation Checklist

4/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Needs review

0 review-needed samples and 10 unassigned samples remain.

Resolve ambiguous and unassigned samples before finalizing the contrast.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Analysis readiness has blockers that must be resolved before DE.

One or more samples are unassigned and need manual grouping decisions.

Assay context may require expert handling before DESeq2-style analysis.

Why This Is Ranked Here

Tumor vs normal

Not suitable Dataset does not meet the current suitability threshold.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Assay differs from search intent Microarray Search intent expects bulk RNA-seq. Assay came from Normalization rules.
Disease context Rheumatoid arthritis Disease context came from Normalization rules.
Likely case group Rheumatoid arthritis 13 samples
Likely control group Healthy control 10 samples

Intent Interpretation

Downgrade or exclusion reason Downgraded assay: microarray cohorts are separated from the RNA-seq intent. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

Comparison: Disease/model vs control. Specimen: Tissue. Comparison suitability: 0%.
Interpreted disease metadata: Rheumatoid arthritis.
Processed data is available for downstream review.
External evidence: PubMed links 21 publications; 21 DOIs available: PMID 24690414, PMID 40765736, PMID 40885352, PMID 40958328, PMID 41007174.
Publication context: Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation.. Arthritis research & therapy, 2014. PMID 24690414. DOI 10.1186/ar4526.
Publication context: Integrated Bioinformatics and Experimental Validation Reveal Macrophage Polarization-Related Biomarkers for Osteoarthritis Diagnosis.. Journal of multidisciplinary healthcare, 2025. PMID 40765736. DOI 10.2147/JMDH.S537507.
Publication context: G protein-coupled receptor-related genes matrix metallopeptidase 9 and tachykinin precursor 1 promote osteoarthritis progression and influence the immune microenvironment.. International journal of biological macromolecules, 2025. PMID 40885352. DOI 10.1016/j.ijbiomac.2025.147208.
Publication context: 18 additional linked PubMed publications are available.

Cautions

Downgraded assay: microarray cohorts are separated from the RNA-seq intent.
Disease/control design without a tumor/normal comparison is outside tumor/normal triage.
Microarray expression context downgraded below primary bulk RNA-seq for the default tissue ranking.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because microarray cohorts should be compared separately from RNA-seq cohorts.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

Microarray expression context was detected; compare separately from RNA-seq cohorts.
Microarray datasets are downgraded in the patient-tissue tumor-normal intent unless secondary assays are explicitly enabled.

Normalized Fields

102 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source synovium GSM1337304 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_125 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337305 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_184 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337306 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_188 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337307 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_228 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337308 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient J_19 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337309 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient NST_1 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337310 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient J_2 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337311 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient J_6 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337312 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient J_7 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337313 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient J_12 (normal controls) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337314 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_20 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337315 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_27 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337316 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_30 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337317 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_35 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337318 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_40 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337319 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_41 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337320 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_56 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337321 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_74 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337322 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_108 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337323 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_109 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337324 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_110 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337325 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_124 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337326 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_141 (rheumatoid arthritis) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337327 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_21 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337328 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_24 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337329 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_54 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337330 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_90 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337331 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_94 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337332 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_97 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337333 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_99 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337334 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_100 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337335 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_104 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

anatomical_source synovium GSM1337336 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence synovial source_name: synovial membrane patient EB_140 (osteoarthrisits) sample-anatomical-source-v1 sample-local anatomical source

assay_type microarray GSE55457 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence microarray dataset_accession: GSE55457 dataset_title: Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation [Jena] organism: Homo sa... keyword match keyword match: microarray

control_type healthy control GSM1337304 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient EB_125 (U133A) synovial membrane patient EB_125 (normal controls) gender: male; age: 61; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337305 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient EB_184 (U133A) synovial membrane patient EB_184 (normal controls) gender: male; age: 64; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337306 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient EB_188 (U133A) synovial membrane patient EB_188 (normal controls) gender: female; age: 78; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337307 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient EB_228 (U133A) synovial membrane patient EB_228 (normal controls) gender: male; age: 65; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337308 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient J_19 (U133A) synovial membrane patient J_19 (normal controls) gender: male; age: 53; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337309 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient NST_1 (U133A) synovial membrane patient NST_1 (normal controls) gender: male; age: 68; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337310 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient J_2 (U133A) synovial membrane patient J_2 (normal controls) gender: female; age: 29; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337311 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient J_6 (U133A) synovial membrane patient J_6 (normal controls) gender: male; age: 17; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337312 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient J_7 (U133A) synovial membrane patient J_7 (normal controls) gender: male; age: 39; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

control_type healthy control GSM1337313 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence normal control Normal, synovial membrane patient J_12 (U133A) synovial membrane patient J_12 (normal controls) gender: male; age: 36; clinical status: normal control controlled vocabulary controlled vocabulary control type match: normal control

disease rheumatoid arthritis GSE55457 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis dataset_accession: GSE55457 dataset_title: Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation [Jena] organism: Homo sa... controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337314 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_20 (U133A) synovial membrane patient EB_20 (rheumatoid arthritis) gender: male; age: 75; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337315 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_27 (U133A) synovial membrane patient EB_27 (rheumatoid arthritis) gender: female; age: 79; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337316 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_30 (U133A) synovial membrane patient EB_30 (rheumatoid arthritis) gender: female; age: 63; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337317 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_35 (U133A) synovial membrane patient EB_35 (rheumatoid arthritis) gender: female; age: 66; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337318 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_40 (U133A) synovial membrane patient EB_40 (rheumatoid arthritis) gender: female; age: 64; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337319 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_41 (U133A) synovial membrane patient EB_41 (rheumatoid arthritis) gender: female; age: 63; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337320 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_56 (U133A) synovial membrane patient EB_56 (rheumatoid arthritis) gender: female; age: 46; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337321 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_74 (U133A) synovial membrane patient EB_74 (rheumatoid arthritis) gender: female; age: 71; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337322 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_108 (U133A) synovial membrane patient EB_108 (rheumatoid arthritis) gender: female; age: 72; clinical status: rheumatoid arthr... controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337323 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_109 (U133A) synovial membrane patient EB_109 (rheumatoid arthritis) gender: female; age: 2; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337324 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_110 (U133A) synovial membrane patient EB_110 (rheumatoid arthritis) gender: male; age: 47; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337325 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_124 (U133A) synovial membrane patient EB_124 (rheumatoid arthritis) gender: male; age: 59; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

disease rheumatoid arthritis GSM1337326 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence rheumatoid arthritis Rheumatoid arthritis, synovial membrane patient EB_141 (U133A) synovial membrane patient EB_141 (rheumatoid arthritis) gender: female; age: 73; clinical status: rheumatoid arthr... controlled vocabulary controlled vocabulary disease match: rheumatoid arthritis

organism Homo sapiens GSE55457 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE55457 dataset_title: Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation [Jena] organism: Homo sa... keyword match keyword match: homo sapiens

sample_type normal tissue GSM1337304 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient EB_125 (U133A) synovial membrane patient EB_125 (normal controls) gender: male; age: 61; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337305 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient EB_184 (U133A) synovial membrane patient EB_184 (normal controls) gender: male; age: 64; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337306 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient EB_188 (U133A) synovial membrane patient EB_188 (normal controls) gender: female; age: 78; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337307 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient EB_228 (U133A) synovial membrane patient EB_228 (normal controls) gender: male; age: 65; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337308 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient J_19 (U133A) synovial membrane patient J_19 (normal controls) gender: male; age: 53; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337309 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient NST_1 (U133A) synovial membrane patient NST_1 (normal controls) gender: male; age: 68; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337310 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient J_2 (U133A) synovial membrane patient J_2 (normal controls) gender: female; age: 29; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337311 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient J_6 (U133A) synovial membrane patient J_6 (normal controls) gender: male; age: 17; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337312 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient J_7 (U133A) synovial membrane patient J_7 (normal controls) gender: male; age: 39; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue GSM1337313 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal Normal, synovial membrane patient J_12 (U133A) synovial membrane patient J_12 (normal controls) gender: male; age: 36; clinical status: normal control controlled vocabulary controlled vocabulary sample type match: normal

tissue synovium GSM1337304 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient EB_125 (U133A) synovial membrane patient EB_125 (normal controls) gender: male; age: 61; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337305 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient EB_184 (U133A) synovial membrane patient EB_184 (normal controls) gender: male; age: 64; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337306 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient EB_188 (U133A) synovial membrane patient EB_188 (normal controls) gender: female; age: 78; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337307 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient EB_228 (U133A) synovial membrane patient EB_228 (normal controls) gender: male; age: 65; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337308 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient J_19 (U133A) synovial membrane patient J_19 (normal controls) gender: male; age: 53; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337309 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient NST_1 (U133A) synovial membrane patient NST_1 (normal controls) gender: male; age: 68; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337310 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient J_2 (U133A) synovial membrane patient J_2 (normal controls) gender: female; age: 29; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337311 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient J_6 (U133A) synovial membrane patient J_6 (normal controls) gender: male; age: 17; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337312 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient J_7 (U133A) synovial membrane patient J_7 (normal controls) gender: male; age: 39; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337313 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Normal, synovial membrane patient J_12 (U133A) synovial membrane patient J_12 (normal controls) gender: male; age: 36; clinical status: normal control controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337314 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_20 (U133A) synovial membrane patient EB_20 (rheumatoid arthritis) gender: male; age: 75; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337315 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_27 (U133A) synovial membrane patient EB_27 (rheumatoid arthritis) gender: female; age: 79; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337316 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_30 (U133A) synovial membrane patient EB_30 (rheumatoid arthritis) gender: female; age: 63; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337317 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_35 (U133A) synovial membrane patient EB_35 (rheumatoid arthritis) gender: female; age: 66; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337318 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_40 (U133A) synovial membrane patient EB_40 (rheumatoid arthritis) gender: female; age: 64; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337319 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_41 (U133A) synovial membrane patient EB_41 (rheumatoid arthritis) gender: female; age: 63; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337320 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_56 (U133A) synovial membrane patient EB_56 (rheumatoid arthritis) gender: female; age: 46; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337321 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_74 (U133A) synovial membrane patient EB_74 (rheumatoid arthritis) gender: female; age: 71; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337322 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_108 (U133A) synovial membrane patient EB_108 (rheumatoid arthritis) gender: female; age: 72; clinical status: rheumatoid arthr... controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337323 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_109 (U133A) synovial membrane patient EB_109 (rheumatoid arthritis) gender: female; age: 2; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337324 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_110 (U133A) synovial membrane patient EB_110 (rheumatoid arthritis) gender: male; age: 47; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337325 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_124 (U133A) synovial membrane patient EB_124 (rheumatoid arthritis) gender: male; age: 59; clinical status: rheumatoid arthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337326 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Rheumatoid arthritis, synovial membrane patient EB_141 (U133A) synovial membrane patient EB_141 (rheumatoid arthritis) gender: female; age: 73; clinical status: rheumatoid arthr... controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337327 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_21 (U133A) synovial membrane patient EB_21 (osteoarthrisits) gender: female; age: 77; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337328 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_24 (U133A) synovial membrane patient EB_24 (osteoarthrisits) gender: female; age: 71; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337329 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_54 (U133A) synovial membrane patient EB_54 (osteoarthrisits) gender: female; age: 76; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337330 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_90 (U133A) synovial membrane patient EB_90 (osteoarthrisits) gender: female; age: 61; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337331 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_94 (U133A) synovial membrane patient EB_94 (osteoarthrisits) gender: female; age: 75; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337332 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_97 (U133A) synovial membrane patient EB_97 (osteoarthrisits) gender: male; age: 78; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337333 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_99 (U133A) synovial membrane patient EB_99 (osteoarthrisits) gender: male; age: 69; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337334 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_100 (U133A) synovial membrane patient EB_100 (osteoarthrisits) gender: female; age: 71; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337335 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_104 (U133A) synovial membrane patient EB_104 (osteoarthrisits) gender: female; age: 80; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

tissue synovium GSM1337336 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence synovial Osteoarthritis, synovial membrane patient EB_140 (U133A) synovial membrane patient EB_140 (osteoarthrisits) gender: female; age: 66; clinical status: osteoarthritis controlled vocabulary controlled vocabulary tissue match: synovial

Sample Group Preview

33 rows shown Show Hide

Study totals: Case 13 | Control 10 | Unassigned 10 | Excluded 0 | Ambiguous 0 33 rows shown

Group	Role	Accession	Title	Source / characteristics	Reason
Rheumatoid arthritis	Case	GSM1337314	Rheumatoid arthritis, synovial membrane patient EB_20 (U133A)	Synovial membrane patient EB_20 (rheumatoid arthritis) Gender: Male; Age: 75; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337315	Rheumatoid arthritis, synovial membrane patient EB_27 (U133A)	Synovial membrane patient EB_27 (rheumatoid arthritis) Gender: Female; Age: 79; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337316	Rheumatoid arthritis, synovial membrane patient EB_30 (U133A)	Synovial membrane patient EB_30 (rheumatoid arthritis) Gender: Female; Age: 63; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337317	Rheumatoid arthritis, synovial membrane patient EB_35 (U133A)	Synovial membrane patient EB_35 (rheumatoid arthritis) Gender: Female; Age: 66; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337318	Rheumatoid arthritis, synovial membrane patient EB_40 (U133A)	Synovial membrane patient EB_40 (rheumatoid arthritis) Gender: Female; Age: 64; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337319	Rheumatoid arthritis, synovial membrane patient EB_41 (U133A)	Synovial membrane patient EB_41 (rheumatoid arthritis) Gender: Female; Age: 63; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337320	Rheumatoid arthritis, synovial membrane patient EB_56 (U133A)	Synovial membrane patient EB_56 (rheumatoid arthritis) Gender: Female; Age: 46; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337321	Rheumatoid arthritis, synovial membrane patient EB_74 (U133A)	Synovial membrane patient EB_74 (rheumatoid arthritis) Gender: Female; Age: 71; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337322	Rheumatoid arthritis, synovial membrane patient EB_108 (U133A)	Synovial membrane patient EB_108 (rheumatoid arthritis) Gender: Female; Age: 72; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337323	Rheumatoid arthritis, synovial membrane patient EB_109 (U133A)	Synovial membrane patient EB_109 (rheumatoid arthritis) Gender: Female; Age: 2; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337324	Rheumatoid arthritis, synovial membrane patient EB_110 (U133A)	Synovial membrane patient EB_110 (rheumatoid arthritis) Gender: Male; Age: 47; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337325	Rheumatoid arthritis, synovial membrane patient EB_124 (U133A)	Synovial membrane patient EB_124 (rheumatoid arthritis) Gender: Male; Age: 59; Clinical status: Rheumatoid arthritis	Case marker detected.
Rheumatoid arthritis	Case	GSM1337326	Rheumatoid arthritis, synovial membrane patient EB_141 (U133A)	Synovial membrane patient EB_141 (rheumatoid arthritis) Gender: Female; Age: 73; Clinical status: Rheumatoid arthritis	Case marker detected.
Healthy control	Control	GSM1337304	Normal, synovial membrane patient EB_125 (U133A)	Synovial membrane patient EB_125 (normal controls) Gender: Male; Age: 61; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337305	Normal, synovial membrane patient EB_184 (U133A)	Synovial membrane patient EB_184 (normal controls) Gender: Male; Age: 64; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337306	Normal, synovial membrane patient EB_188 (U133A)	Synovial membrane patient EB_188 (normal controls) Gender: Female; Age: 78; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337307	Normal, synovial membrane patient EB_228 (U133A)	Synovial membrane patient EB_228 (normal controls) Gender: Male; Age: 65; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337308	Normal, synovial membrane patient J_19 (U133A)	Synovial membrane patient J_19 (normal controls) Gender: Male; Age: 53; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337309	Normal, synovial membrane patient NST_1 (U133A)	Synovial membrane patient NST_1 (normal controls) Gender: Male; Age: 68; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337310	Normal, synovial membrane patient J_2 (U133A)	Synovial membrane patient J_2 (normal controls) Gender: Female; Age: 29; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337311	Normal, synovial membrane patient J_6 (U133A)	Synovial membrane patient J_6 (normal controls) Gender: Male; Age: 17; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337312	Normal, synovial membrane patient J_7 (U133A)	Synovial membrane patient J_7 (normal controls) Gender: Male; Age: 39; Clinical status: Normal control	Sample-local control marker detected.
Healthy control	Control	GSM1337313	Normal, synovial membrane patient J_12 (U133A)	Synovial membrane patient J_12 (normal controls) Gender: Male; Age: 36; Clinical status: Normal control	Sample-local control marker detected.
Unassigned	Unassigned	GSM1337327	Osteoarthritis, synovial membrane patient EB_21 (U133A)	Synovial membrane patient EB_21 (osteoarthrisits) Gender: Female; Age: 77; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337328	Osteoarthritis, synovial membrane patient EB_24 (U133A)	Synovial membrane patient EB_24 (osteoarthrisits) Gender: Female; Age: 71; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337329	Osteoarthritis, synovial membrane patient EB_54 (U133A)	Synovial membrane patient EB_54 (osteoarthrisits) Gender: Female; Age: 76; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337330	Osteoarthritis, synovial membrane patient EB_90 (U133A)	Synovial membrane patient EB_90 (osteoarthrisits) Gender: Female; Age: 61; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337331	Osteoarthritis, synovial membrane patient EB_94 (U133A)	Synovial membrane patient EB_94 (osteoarthrisits) Gender: Female; Age: 75; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337332	Osteoarthritis, synovial membrane patient EB_97 (U133A)	Synovial membrane patient EB_97 (osteoarthrisits) Gender: Male; Age: 78; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337333	Osteoarthritis, synovial membrane patient EB_99 (U133A)	Synovial membrane patient EB_99 (osteoarthrisits) Gender: Male; Age: 69; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337334	Osteoarthritis, synovial membrane patient EB_100 (U133A)	Synovial membrane patient EB_100 (osteoarthrisits) Gender: Female; Age: 71; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337335	Osteoarthritis, synovial membrane patient EB_104 (U133A)	Synovial membrane patient EB_104 (osteoarthrisits) Gender: Female; Age: 80; Clinical status: Osteoarthritis	No explicit case or control marker detected.
Unassigned	Unassigned	GSM1337336	Osteoarthritis, synovial membrane patient EB_140 (U133A)	Synovial membrane patient EB_140 (osteoarthrisits) Gender: Female; Age: 66; Clinical status: Osteoarthritis	No explicit case or control marker detected.

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External Validation Finder

Carry Siftome's disease, organism, specimen, assay, data type, and accession into a validation project. Uncertain fields remain Unknown.

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Use as Discovery Cohort