GSE60424

Next generation sequencing of human immune cell subsets across diseases

Whole-study status Exploratory only

Dataset can inform exploration but is not strong enough for primary analysis.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

View matching samples

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source
GEO
Assay
bulk RNA-seq
Organism
Homo sapiens
Whole-study samples
134 samples
Specimen
Biofluid
Reported/interpreted study design
Patient biofluid vs healthy control Design classification does not establish patient pairs.
Comparison type
Tumor vs normal
Contributors
Speake C, Linsley PS, Whalen E, Chaussabel D, Presnell SR, Mason MJ, Gersuk VH, O'Brien KK, Nguyen Q, Greenbaum CJ, Buckner JH, Malhotra U, Osmond S
Contact name
Stephanie Osmond
Submission date
2014-08-14
Last update
2024-01-04
Organization
Benaroya Research Institute
Department
Not available
Public date
2015-01-06
Experiment types
Expression profiling by high throughput sequencing
Platforms
GPL15456 Illumina HiScanSQ (Homo sapiens)
Series type
Series
SubSeries
Not available
BioProject
PRJNA258216

Summary

This study compared whole transcriptome signatures of 6 immune cell subsets and whole blood from patients with an array of immune-associated diseases. Fresh blood samples were collected from healthy subjects and subjects diagnosed type 1 diabetes, amyotrophic lateral sclerosis, and sepsis, as well as multiple sclerosis patients before and 24 hours after the first treatment with IFN-beta. At the time of blood draw, an aliquot of whole blood was collected into a Tempus tube (Invitrogen), while the remainder of the primary fresh blood sample was processed to highly pure populations of neutrophils, monocytes, B cells, CD4 T cells, CD8 T cells, and natural killer cells. RNA was extracted from each of these cell subsets, as well as the whole blood samples, and processed into RNA sequencing (RNAseq) libraries (Illumina TruSeq). Sequencing libraries were analyzed on an Illumina HiScan, with a target read depth of ~20M reads. Reads were demultiplexed, mapped to human gene models (ENSEMBL), and tabulated using HTSeq. Read count data were normalized by the TMM procedure (edgeR package).

Overall design

We performed whole genome RNAseq profiling of immune cell subsets and whole blood from subjects with an array of immune-associated diseases.

Source Evidence

4 sources
Source Contribution Status
GEO

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Sample records
134 GSM samples
 Primary source
recount3

Planned trusted source for processed count availability.

 Not checked yet
Expression Atlas

Planned source for curated expression experiment links.

 Not checked yet
PubMed

Publication context when PubMed identifiers are already known.

 Not checked yet

Metadata Quality Components

Persisted metadata quality

100 pts
Clarity
100%
Weight
100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Review before analysis
88% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

3/15 pts

Unassigned or review-needed samples remain before analysis.

Blocking warnings

10/10 pts

No dataset warnings are present.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

  • 39 samples are still unassigned.

Next Steps

  • Resolve unassigned or review-needed samples in the grouping table.

Analysis Preparation Checklist

4/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Needs review

0 review-needed samples and 39 unassigned samples remain.

Resolve ambiguous and unassigned samples before finalizing the contrast.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Analysis readiness has blockers that must be resolved before DE.

One or more samples are unassigned and need manual grouping decisions.

Why This Is Ranked Here

Tumor vs normal
Exploratory only Dataset can inform exploration but is not strong enough for primary analysis.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

  • Disease context Amyotrophic lateral sclerosis, sepsis, type 1 diabetes Disease context came from Normalization rules.
  • Likely case group Type 1 diabetes 67 samples
  • Likely control group Healthy control 28 samples

Intent Interpretation

  • Downgrade or exclusion reason Downgraded for tissue search because it is a biofluid cohort. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

  • Comparison: Patient biofluid vs healthy control. Specimen: Biofluid. Comparison suitability: 20%.
  • Prioritized assay: bulk RNA-seq is the active assay expectation.
  • Interpreted disease metadata: Amyotrophic lateral sclerosis, Metabolic disease, Sepsis, Type 1 diabetes.
  • Processed data is available for downstream review.

Cautions

  • Downgraded for tissue search because it is a biofluid cohort.
  • Blood, plasma, or serum cohort downgraded because this ranking targets tissue tumor-vs-normal comparisons.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

No dataset warnings

Normalized Fields

showing 500 of 673 fields

Sample Group Preview

showing 117 of 134 preview rows Show Hide
Study totals: Case 67 | Control 28 | Unassigned 39 | Excluded 0 | Ambiguous 0 showing 117 of 134 preview rows
Group Role Accession Title Source / characteristics Reason
Type 1 diabetes Case GSM1479436 Lib224 Whole Blood Age: 24; Cellcount: --; Celltype: Whole Blood; Collectiondate: May 23 2012; Diseasestatus: Type 1 Diabetes; Donorid: 34; Gender: F; Index: 13; Race: White; Samplename: 34_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 7 Case marker detected.
Type 1 diabetes Case GSM1479437 Lib225 Whole Blood Age: 27; Cellcount: --; Celltype: Whole Blood; Collectiondate: June 6 2012; Diseasestatus: Type 1 Diabetes; Donorid: 37; Gender: F; Index: 23; Race: White; Samplename: 37_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 3 Case marker detected.
Type 1 diabetes Case GSM1479454 Lib242 Whole Blood Age: 24; Cellcount: 19800000; Celltype: Neutrophils; Collectiondate: May 23 2012; Diseasestatus: Type 1 Diabetes; Donorid: 34; Gender: F; Index: 20; Race: White; Samplename: 34_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 7 Case marker detected.
Type 1 diabetes Case GSM1479455 Lib243 Whole Blood Age: 24; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: May 23 2012; Diseasestatus: Type 1 Diabetes; Donorid: 34; Gender: F; Index: 14; Race: White; Samplename: 34_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 7 Case marker detected.
Type 1 diabetes Case GSM1479456 Lib244 Whole Blood Age: 24; Cellcount: 1006332; Celltype: B-cells; Collectiondate: May 23 2012; Diseasestatus: Type 1 Diabetes; Donorid: 34; Gender: F; Index: 21; Race: White; Samplename: 34_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 7 Case marker detected.
Type 1 diabetes Case GSM1479457 Lib245 Whole Blood Age: 24; Cellcount: 2000000; Celltype: CD4; Collectiondate: May 23 2012; Diseasestatus: Type 1 Diabetes; Donorid: 34; Gender: F; Index: 15; Race: White; Samplename: 34_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 7 Case marker detected.
Type 1 diabetes Case GSM1479458 Lib246 Whole Blood Age: 24; Cellcount: 2000000; Celltype: CD8; Collectiondate: May 23 2012; Diseasestatus: Type 1 Diabetes; Donorid: 34; Gender: F; Index: 22; Race: White; Samplename: 34_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 7 Case marker detected.
Type 1 diabetes Case GSM1479459 Lib247 Whole Blood Age: 24; Cellcount: 320942; Celltype: NK; Collectiondate: May 23 2012; Diseasestatus: Type 1 Diabetes; Donorid: 34; Gender: F; Index: 16; Race: White; Samplename: 34_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 7 Case marker detected.
Type 1 diabetes Case GSM1479460 Lib248 Whole Blood Age: 27; Cellcount: 10237500; Celltype: Neutrophils; Collectiondate: June 6 2012; Diseasestatus: Type 1 Diabetes; Donorid: 37; Gender: F; Index: 18; Race: White; Samplename: 37_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 3 Case marker detected.
Type 1 diabetes Case GSM1479461 Lib249 Whole Blood Age: 27; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: June 6 2012; Diseasestatus: Type 1 Diabetes; Donorid: 37; Gender: F; Index: 25; Race: White; Samplename: 37_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 3 Case marker detected.
Type 1 diabetes Case GSM1479462 Lib250 Whole Blood Age: 27; Cellcount: 903409; Celltype: B-cells; Collectiondate: June 6 2012; Diseasestatus: Type 1 Diabetes; Donorid: 37; Gender: F; Index: 19; Race: White; Samplename: 37_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 3 Case marker detected.
Type 1 diabetes Case GSM1479463 Lib251 Whole Blood Age: 27; Cellcount: 2000000; Celltype: CD4; Collectiondate: June 6 2012; Diseasestatus: Type 1 Diabetes; Donorid: 37; Gender: F; Index: 27; Race: White; Samplename: 37_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 3 Case marker detected.
Type 1 diabetes Case GSM1479464 Lib252 Whole Blood Age: 27; Cellcount: 1786114; Celltype: CD8; Collectiondate: June 6 2012; Diseasestatus: Type 1 Diabetes; Donorid: 37; Gender: F; Index: 20; Race: White; Samplename: 37_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 3 Case marker detected.
Sepsis Case GSM1479465 Lib253 Whole Blood Age: 80; Cellcount: 45900000; Celltype: Neutrophils; Collectiondate: June 22 2012; Diseasestatus: Sepsis; Donorid: 43; Gender: M; Index: 1; Race: White; Samplename: 43_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479466 Lib254 Whole Blood Age: 80; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: June 22 2012; Diseasestatus: Sepsis; Donorid: 43; Gender: M; Index: 2; Race: White; Samplename: 43_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479467 Lib255 Whole Blood Age: 80; Cellcount: 73307; Celltype: B-cells; Collectiondate: June 22 2012; Diseasestatus: Sepsis; Donorid: 43; Gender: M; Index: 3; Race: White; Samplename: 43_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479468 Lib256 Whole Blood Age: 80; Cellcount: 2000000; Celltype: CD4; Collectiondate: June 22 2012; Diseasestatus: Sepsis; Donorid: 43; Gender: M; Index: 4; Race: White; Samplename: 43_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479469 Lib257 Whole Blood Age: 80; Cellcount: 2000000; Celltype: CD8; Collectiondate: June 22 2012; Diseasestatus: Sepsis; Donorid: 43; Gender: M; Index: 13; Race: White; Samplename: 43_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479470 Lib258 Whole Blood Age: 80; Cellcount: 953426; Celltype: NK; Collectiondate: June 22 2012; Diseasestatus: Sepsis; Donorid: 43; Gender: M; Index: 20; Race: White; Samplename: 43_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479471 Lib259 Whole Blood Age: 80; Cellcount: --; Celltype: Whole Blood; Collectiondate: June 22 2012; Diseasestatus: Sepsis; Donorid: 43; Gender: M; Index: 5; Race: White; Samplename: 43_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479472 Lib260 Whole Blood Age: 39; Cellcount: 31250000; Celltype: Neutrophils; Collectiondate: July 5 2012; Diseasestatus: Sepsis; Donorid: 49; Gender: F; Index: 6; Race: White; Samplename: 49_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479473 Lib261 Whole Blood Age: 39; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: July 5 2012; Diseasestatus: Sepsis; Donorid: 49; Gender: F; Index: 8; Race: White; Samplename: 49_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479474 Lib262 Whole Blood Age: 39; Cellcount: 2000000; Celltype: B-cells; Collectiondate: July 5 2012; Diseasestatus: Sepsis; Donorid: 49; Gender: F; Index: 7; Race: White; Samplename: 49_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479475 Lib263 Whole Blood Age: 39; Cellcount: 2000000; Celltype: CD4; Collectiondate: July 5 2012; Diseasestatus: Sepsis; Donorid: 49; Gender: F; Index: 12; Race: White; Samplename: 49_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479476 Lib264 Whole Blood Age: 39; Cellcount: 498269; Celltype: CD8; Collectiondate: July 5 2012; Diseasestatus: Sepsis; Donorid: 49; Gender: F; Index: 3; Race: White; Samplename: 49_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479477 Lib265 Whole Blood Age: 39; Cellcount: --; Celltype: Whole Blood; Collectiondate: July 5 2012; Diseasestatus: Sepsis; Donorid: 49; Gender: F; Index: 21; Race: White; Samplename: 49_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479478 Lib266 Whole Blood Age: 59; Cellcount: 49750000; Celltype: Neutrophils; Collectiondate: July 6 2012; Diseasestatus: Sepsis; Donorid: 50; Gender: F; Index: 22; Race: Asian; Samplename: 50_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479479 Lib267 Whole Blood Age: 59; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: July 6 2012; Diseasestatus: Sepsis; Donorid: 50; Gender: F; Index: 13; Race: Asian; Samplename: 50_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479480 Lib268 Whole Blood Age: 59; Cellcount: 2000000; Celltype: B-cells; Collectiondate: July 6 2012; Diseasestatus: Sepsis; Donorid: 50; Gender: F; Index: 9; Race: Asian; Samplename: 50_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479481 Lib269 Whole Blood Age: 59; Cellcount: 2000000; Celltype: CD4; Collectiondate: July 6 2012; Diseasestatus: Sepsis; Donorid: 50; Gender: F; Index: 2; Race: Asian; Samplename: 50_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479482 Lib270 Whole Blood Age: 59; Cellcount: 529358; Celltype: CD8; Collectiondate: July 6 2012; Diseasestatus: Sepsis; Donorid: 50; Gender: F; Index: 14; Race: Asian; Samplename: 50_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479483 Lib271 Whole Blood Age: 59; Cellcount: 365861; Celltype: NK; Collectiondate: July 6 2012; Diseasestatus: Sepsis; Donorid: 50; Gender: F; Index: 15; Race: Asian; Samplename: 50_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Sepsis Case GSM1479484 Lib272 Whole Blood Age: 59; Cellcount: --; Celltype: Whole Blood; Collectiondate: July 6 2012; Diseasestatus: Sepsis; Donorid: 50; Gender: F; Index: 16; Race: Asian; Samplename: 50_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479513 Lib302 Whole Blood Age: --; Cellcount: 7987500; Celltype: Neutrophils; Collectiondate: August 16 2012; Diseasestatus: ALS; Donorid: 52; Index: 14; Race: --; Samplename: 52_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479514 Lib303 Whole Blood Age: --; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: August 16 2012; Diseasestatus: ALS; Donorid: 52; Index: 22; Race: --; Samplename: 52_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479515 Lib304 Whole Blood Age: --; Cellcount: 702000; Celltype: B-cells; Collectiondate: August 16 2012; Diseasestatus: ALS; Donorid: 52; Index: 8; Race: --; Samplename: 52_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479516 Lib305 Whole Blood Age: --; Cellcount: 2000000; Celltype: CD4; Collectiondate: August 16 2012; Diseasestatus: ALS; Donorid: 52; Index: 15; Race: --; Samplename: 52_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479517 Lib306 Whole Blood Age: --; Cellcount: 928859; Celltype: CD8; Collectiondate: August 16 2012; Diseasestatus: ALS; Donorid: 52; Index: 6; Race: --; Samplename: 52_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479518 Lib307 Whole Blood Age: --; Cellcount: 552072; Celltype: NK; Collectiondate: August 16 2012; Diseasestatus: ALS; Donorid: 52; Index: 16; Race: --; Samplename: 52_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479519 Lib308 Whole Blood Age: --; Cellcount: --; Celltype: Whole Blood; Collectiondate: August 16 2012; Diseasestatus: ALS; Donorid: 52; Index: 15; Race: --; Samplename: 52_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479527 Lib316 Whole Blood Age: --; Cellcount: 15862500; Celltype: Neutrophils; Collectiondate: August 22 2012; Diseasestatus: ALS; Donorid: 54; Index: 10; Race: --; Samplename: 54_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479528 Lib317 Whole Blood Age: --; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: August 22 2012; Diseasestatus: ALS; Donorid: 54; Index: 5; Race: --; Samplename: 54_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479529 Lib318 Whole Blood Age: --; Cellcount: 1078502; Celltype: B-cells; Collectiondate: August 22 2012; Diseasestatus: ALS; Donorid: 54; Index: 20; Race: --; Samplename: 54_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479530 Lib319 Whole Blood Age: --; Cellcount: 2000000; Celltype: CD4; Collectiondate: August 22 2012; Diseasestatus: ALS; Donorid: 54; Index: 25; Race: --; Samplename: 54_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479531 Lib320 Whole Blood Age: --; Cellcount: 2000000; Celltype: CD8; Collectiondate: August 22 2012; Diseasestatus: ALS; Donorid: 54; Index: 10; Race: --; Samplename: 54_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479532 Lib321 Whole Blood Age: --; Cellcount: 601013; Celltype: NK; Collectiondate: August 22 2012; Diseasestatus: ALS; Donorid: 54; Index: 21; Race: --; Samplename: 54_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Amyotrophic lateral sclerosis Case GSM1479533 Lib322 Whole Blood Age: --; Cellcount: --; Celltype: Whole Blood; Collectiondate: August 22 2012; Diseasestatus: ALS; Donorid: 54; Index: 12; Race: --; Samplename: 54_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Case marker detected.
Type 1 diabetes Case GSM1479534 Lib323 Whole Blood Age: 42; Cellcount: 17550000; Celltype: Neutrophils; Collectiondate: June 19 2012; Diseasestatus: Type 1 Diabetes; Donorid: 40; Gender: M; Index: 1; Race: White; Samplename: 40_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 6 Case marker detected.
Type 1 diabetes Case GSM1479535 Lib324 Whole Blood Age: 42; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: June 19 2012; Diseasestatus: Type 1 Diabetes; Donorid: 40; Gender: M; Index: 2; Race: White; Samplename: 40_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 6 Case marker detected.
Type 1 diabetes Case GSM1479536 Lib325 Whole Blood Age: 42; Cellcount: 1275892; Celltype: B-cells; Collectiondate: June 19 2012; Diseasestatus: Type 1 Diabetes; Donorid: 40; Gender: M; Index: 11; Race: White; Samplename: 40_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: 6 Case marker detected.
17 additional case samples are hidden from this preview.
Healthy control Control GSM1479433 Lib221 Whole Blood Age: 32; Cellcount: --; Celltype: Whole Blood; Collectiondate: June 26 2012; Diseasestatus: Healthy Control; Donorid: 44; Gender: F; Index: 21; Race: Hispanic; Samplename: 44_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479438 Lib226 Whole Blood Age: 32; Cellcount: 14737500; Celltype: Neutrophils; Collectiondate: June 26 2012; Diseasestatus: Healthy Control; Donorid: 44; Gender: F; Index: 5; Race: Hispanic; Samplename: 44_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479439 Lib227 Whole Blood Age: 32; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: June 26 2012; Diseasestatus: Healthy Control; Donorid: 44; Gender: F; Index: 23; Race: Hispanic; Samplename: 44_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479440 Lib228 Whole Blood Age: 32; Cellcount: 1012333; Celltype: B-cells; Collectiondate: June 26 2012; Diseasestatus: Healthy Control; Donorid: 44; Gender: F; Index: 6; Race: Hispanic; Samplename: 44_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479441 Lib229 Whole Blood Age: 32; Cellcount: 1071990; Celltype: CD4; Collectiondate: June 26 2012; Diseasestatus: Healthy Control; Donorid: 44; Gender: F; Index: 25; Race: Hispanic; Samplename: 44_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479442 Lib230 Whole Blood Age: 32; Cellcount: 1011154; Celltype: CD8; Collectiondate: June 26 2012; Diseasestatus: Healthy Control; Donorid: 44; Gender: F; Index: 12; Race: Hispanic; Samplename: 44_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479443 Lib231 Whole Blood Age: 32; Cellcount: 379236; Celltype: NK; Collectiondate: June 26 2012; Diseasestatus: Healthy Control; Donorid: 44; Gender: F; Index: 19; Race: Hispanic; Samplename: 44_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479499 Lib288 Whole Blood Age: 29; Cellcount: 42250000; Celltype: Neutrophils; Collectiondate: January 25 2012; Diseasestatus: Healthy Control; Donorid: 20; Gender: F; Index: 1; Race: White; Samplename: 20_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479500 Lib289 Whole Blood Age: 29; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: January 25 2012; Diseasestatus: Healthy Control; Donorid: 20; Gender: F; Index: 2; Race: White; Samplename: 20_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479501 Lib290 Whole Blood Age: 29; Cellcount: 2000000; Celltype: B-cells; Collectiondate: January 25 2012; Diseasestatus: Healthy Control; Donorid: 20; Gender: F; Index: 4; Race: White; Samplename: 20_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479502 Lib291 Whole Blood Age: 29; Cellcount: 2000000; Celltype: CD4; Collectiondate: January 25 2012; Diseasestatus: Healthy Control; Donorid: 20; Gender: F; Index: 5; Race: White; Samplename: 20_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479503 Lib292 Whole Blood Age: 29; Cellcount: 1500000; Celltype: CD8; Collectiondate: January 25 2012; Diseasestatus: Healthy Control; Donorid: 20; Gender: F; Index: 27; Race: White; Samplename: 20_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479504 Lib293 Whole Blood Age: 29; Cellcount: 285000; Celltype: NK; Collectiondate: January 25 2012; Diseasestatus: Healthy Control; Donorid: 20; Gender: F; Index: 11; Race: White; Samplename: 20_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479505 Lib294 Whole Blood Age: 29; Cellcount: --; Celltype: Whole Blood; Collectiondate: January 25 2012; Diseasestatus: Healthy Control; Donorid: 20; Gender: F; Index: 6; Race: White; Samplename: 20_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479506 Lib295 Whole Blood Age: 22; Cellcount: 3700000; Celltype: Neutrophils; Collectiondate: February 2 2012; Diseasestatus: Healthy Control; Donorid: 21; Gender: F; Index: 21; Race: White; Samplename: 21_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479507 Lib296 Whole Blood Age: 22; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: February 2 2012; Diseasestatus: Healthy Control; Donorid: 21; Gender: F; Index: 3; Race: White; Samplename: 21_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479508 Lib297 Whole Blood Age: 22; Cellcount: 363469; Celltype: B-cells; Collectiondate: February 2 2012; Diseasestatus: Healthy Control; Donorid: 21; Gender: F; Index: 7; Race: White; Samplename: 21_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479509 Lib298 Whole Blood Age: 22; Cellcount: 2000000; Celltype: CD4; Collectiondate: February 2 2012; Diseasestatus: Healthy Control; Donorid: 21; Gender: F; Index: 12; Race: White; Samplename: 21_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479510 Lib299 Whole Blood Age: 22; Cellcount: 2000000; Celltype: CD8; Collectiondate: February 2 2012; Diseasestatus: Healthy Control; Donorid: 21; Gender: F; Index: 13; Race: White; Samplename: 21_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479511 Lib300 Whole Blood Age: 22; Cellcount: 147461; Celltype: NK; Collectiondate: February 2 2012; Diseasestatus: Healthy Control; Donorid: 21; Gender: F; Index: 14; Race: White; Samplename: 21_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479512 Lib301 Whole Blood Age: 22; Cellcount: --; Celltype: Whole Blood; Collectiondate: February 2 2012; Diseasestatus: Healthy Control; Donorid: 21; Gender: F; Index: 20; Race: White; Samplename: 21_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479520 Lib309 Whole Blood Age: 30; Cellcount: 17887500; Celltype: Neutrophils; Collectiondate: August 21 2012; Diseasestatus: Healthy Control; Donorid: 53; Gender: F; Index: 18; Race: White; Samplename: 53_Neutrophils; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479521 Lib310 Whole Blood Age: 30; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: August 21 2012; Diseasestatus: Healthy Control; Donorid: 53; Gender: F; Index: 18; Race: White; Samplename: 53_Monocytes; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479522 Lib311 Whole Blood Age: 30; Cellcount: 682371; Celltype: B-cells; Collectiondate: August 21 2012; Diseasestatus: Healthy Control; Donorid: 53; Gender: F; Index: 23; Race: White; Samplename: 53_Bcells; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479523 Lib312 Whole Blood Age: 30; Cellcount: 2000000; Celltype: CD4; Collectiondate: August 21 2012; Diseasestatus: Healthy Control; Donorid: 53; Gender: F; Index: 9; Race: White; Samplename: 53_CD4T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479524 Lib313 Whole Blood Age: 30; Cellcount: 2000000; Celltype: CD8; Collectiondate: August 21 2012; Diseasestatus: Healthy Control; Donorid: 53; Gender: F; Index: 19; Race: White; Samplename: 53_CD8T; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479525 Lib314 Whole Blood Age: 30; Cellcount: 140773; Celltype: NK; Collectiondate: August 21 2012; Diseasestatus: Healthy Control; Donorid: 53; Gender: F; Index: 11; Race: White; Samplename: 53_NK; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Healthy control Control GSM1479526 Lib315 Whole Blood Age: 30; Cellcount: --; Celltype: Whole Blood; Collectiondate: August 21 2012; Diseasestatus: Healthy Control; Donorid: 53; Gender: F; Index: 8; Race: White; Samplename: 53_Tempus; Smoker: --; Time since last flare (months): --; Time since steroid dose: --; Time since symptom onset (yrs): --; Years since diagnosis: -- Sample-local control marker detected.
Unassigned Unassigned GSM1479434 Lib222 Whole Blood Age: 52; Cellcount: --; Celltype: Whole Blood; Collectiondate: May 21 2012; Diseasestatus: MS pretreatment; Donorid: 31; Gender: F; Index: 2; Race: White; Samplename: 31_Tempus; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479435 Lib223 Whole Blood Age: 52; Cellcount: --; Celltype: Whole Blood; Collectiondate: May 22 2012; Diseasestatus: MS posttreatment; Donorid: 33; Gender: F; Index: 9; Race: White; Samplename: 33_Tempus; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479444 Lib232 Whole Blood Age: 52; Cellcount: 16312500; Celltype: Neutrophils; Collectiondate: May 21 2012; Diseasestatus: MS pretreatment; Donorid: 31; Gender: F; Index: 1; Race: White; Samplename: 31_Neutrophils; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479445 Lib233 Whole Blood Age: 52; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: May 21 2012; Diseasestatus: MS pretreatment; Donorid: 31; Gender: F; Index: 4; Race: White; Samplename: 31_Monocytes; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479446 Lib234 Whole Blood Age: 52; Cellcount: 409387; Celltype: B-cells; Collectiondate: May 21 2012; Diseasestatus: MS pretreatment; Donorid: 31; Gender: F; Index: 3; Race: White; Samplename: 31_Bcells; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479447 Lib235 Whole Blood Age: 52; Cellcount: 2000000; Celltype: CD4; Collectiondate: May 21 2012; Diseasestatus: MS pretreatment; Donorid: 31; Gender: F; Index: 5; Race: White; Samplename: 31_CD4T; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479448 Lib236 Whole Blood Age: 52; Cellcount: 1100105; Celltype: CD8; Collectiondate: May 21 2012; Diseasestatus: MS pretreatment; Donorid: 31; Gender: F; Index: 8; Race: White; Samplename: 31_CD8T; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479449 Lib237 Whole Blood Age: 52; Cellcount: 190000000; Celltype: Neutrophils; Collectiondate: May 22 2012; Diseasestatus: MS posttreatment; Donorid: 33; Gender: F; Index: 6; Race: White; Samplename: 33_Neutrophils; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479450 Lib238 Whole Blood Age: 52; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: May 22 2012; Diseasestatus: MS posttreatment; Donorid: 33; Gender: F; Index: 10; Race: White; Samplename: 33_Monocytes; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479451 Lib239 Whole Blood Age: 52; Cellcount: 273769; Celltype: B-cells; Collectiondate: May 22 2012; Diseasestatus: MS posttreatment; Donorid: 33; Gender: F; Index: 7; Race: White; Samplename: 33_Bcells; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479452 Lib240 Whole Blood Age: 52; Cellcount: 2000000; Celltype: CD4; Collectiondate: May 22 2012; Diseasestatus: MS posttreatment; Donorid: 33; Gender: F; Index: 11; Race: White; Samplename: 33_CD4T; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479453 Lib241 Whole Blood Age: 52; Cellcount: 2000000; Celltype: CD8; Collectiondate: May 22 2012; Diseasestatus: MS posttreatment; Donorid: 33; Gender: F; Index: 12; Race: White; Samplename: 33_CD8T; Smoker: Y; Time since last flare (months): 1; Time since steroid dose: 3 weeks, oral; Time since symptom onset (yrs): 1; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479485 Lib273 Whole Blood Age: 36; Cellcount: 41000000; Celltype: Neutrophils; Collectiondate: June 28 2012; Diseasestatus: MS pretreatment; Donorid: 45; Gender: F; Index: 16; Race: White; Samplename: 45_Neutrophils; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479486 Lib274 Whole Blood Age: 36; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: June 28 2012; Diseasestatus: MS pretreatment; Donorid: 45; Gender: F; Index: 23; Race: White; Samplename: 45_Monocytes; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479487 Lib275 Whole Blood Age: 36; Cellcount: 843981; Celltype: B-cells; Collectiondate: June 28 2012; Diseasestatus: MS pretreatment; Donorid: 45; Gender: F; Index: 18; Race: White; Samplename: 45_Bcells; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479488 Lib276 Whole Blood Age: 36; Cellcount: 2000000; Celltype: CD4; Collectiondate: June 28 2012; Diseasestatus: MS pretreatment; Donorid: 45; Gender: F; Index: 10; Race: White; Samplename: 45_CD4T; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479489 Lib277 Whole Blood Age: 36; Cellcount: 2000000; Celltype: CD8; Collectiondate: June 28 2012; Diseasestatus: MS pretreatment; Donorid: 45; Gender: F; Index: 19; Race: White; Samplename: 45_CD8T; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479490 Lib278 Whole Blood Age: 36; Cellcount: 329348; Celltype: NK; Collectiondate: June 28 2012; Diseasestatus: MS pretreatment; Donorid: 45; Gender: F; Index: 4; Race: White; Samplename: 45_NK; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479491 Lib279 Whole Blood Age: 36; Cellcount: --; Celltype: Whole Blood; Collectiondate: June 28 2012; Diseasestatus: MS pretreatment; Donorid: 45; Gender: F; Index: 9; Race: White; Samplename: 45_Tempus; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479492 Lib280 Whole Blood Age: 36; Cellcount: 34537500; Celltype: Neutrophils; Collectiondate: June 29 2012; Diseasestatus: MS posttreatment; Donorid: 46; Gender: F; Index: 22; Race: White; Samplename: 46_Neutrophils; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479493 Lib281 Whole Blood Age: 36; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: June 29 2012; Diseasestatus: MS posttreatment; Donorid: 46; Gender: F; Index: 7; Race: White; Samplename: 46_Monocytes; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479494 Lib282 Whole Blood Age: 36; Cellcount: 487967; Celltype: B-cells; Collectiondate: June 29 2012; Diseasestatus: MS posttreatment; Donorid: 46; Gender: F; Index: 25; Race: White; Samplename: 46_Bcells; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479495 Lib283 Whole Blood Age: 36; Cellcount: 2000000; Celltype: CD4; Collectiondate: June 29 2012; Diseasestatus: MS posttreatment; Donorid: 46; Gender: F; Index: 27; Race: White; Samplename: 46_CD4T; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479496 Lib284 Whole Blood Age: 36; Cellcount: 2000000; Celltype: CD8; Collectiondate: June 29 2012; Diseasestatus: MS posttreatment; Donorid: 46; Gender: F; Index: 11; Race: White; Samplename: 46_CD8T; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479497 Lib285 Whole Blood Age: 36; Cellcount: 301460; Celltype: NK; Collectiondate: June 29 2012; Diseasestatus: MS posttreatment; Donorid: 46; Gender: F; Index: 1; Race: White; Samplename: 46_NK; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479498 Lib286 Whole Blood Age: 36; Cellcount: --; Celltype: Whole Blood; Collectiondate: June 29 2012; Diseasestatus: MS posttreatment; Donorid: 46; Gender: F; Index: 27; Race: White; Samplename: 46_Tempus; Smoker: N; Time since last flare (months): 47; Time since steroid dose: --; Time since symptom onset (yrs): 10; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479547 Lib336 Whole Blood Age: 35; Cellcount: 13275000; Celltype: Neutrophils; Collectiondate: August 23 2012; Diseasestatus: MS pretreatment; Donorid: 55; Gender: F; Index: 20; Race: White; Samplename: 55_Neutrophils; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479548 Lib337 Whole Blood Age: 35; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: August 23 2012; Diseasestatus: MS pretreatment; Donorid: 55; Gender: F; Index: 14; Race: White; Samplename: 55_Monocytes; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479549 Lib338 Whole Blood Age: 35; Cellcount: 871287; Celltype: B-cells; Collectiondate: August 23 2012; Diseasestatus: MS pretreatment; Donorid: 55; Gender: F; Index: 22; Race: White; Samplename: 55_Bcells; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479550 Lib339 Whole Blood Age: 35; Cellcount: 2000000; Celltype: CD4; Collectiondate: August 23 2012; Diseasestatus: MS pretreatment; Donorid: 55; Gender: F; Index: 8; Race: White; Samplename: 55_CD4T; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479551 Lib340 Whole Blood Age: 35; Cellcount: 2000000; Celltype: CD8; Collectiondate: August 23 2012; Diseasestatus: MS pretreatment; Donorid: 55; Gender: F; Index: 15; Race: White; Samplename: 55_CD8T; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479552 Lib341 Whole Blood Age: 35; Cellcount: --; Celltype: Whole Blood; Collectiondate: August 23 2012; Diseasestatus: MS pretreatment; Donorid: 55; Gender: F; Index: 6; Race: White; Samplename: 55_Tempus; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479553 Lib342 Whole Blood Age: 35; Cellcount: 10237500; Celltype: Neutrophils; Collectiondate: August 24 2012; Diseasestatus: MS posttreatment; Donorid: 56; Gender: F; Index: 16; Race: White; Samplename: 56_Neutrophils; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479554 Lib343 Whole Blood Age: 35; Cellcount: 2000000; Celltype: Monocytes; Collectiondate: August 24 2012; Diseasestatus: MS posttreatment; Donorid: 56; Gender: F; Index: 15; Race: White; Samplename: 56_Monocytes; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479555 Lib344 Whole Blood Age: 35; Cellcount: 640619; Celltype: B-cells; Collectiondate: August 24 2012; Diseasestatus: MS posttreatment; Donorid: 56; Gender: F; Index: 10; Race: White; Samplename: 56_Bcells; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479556 Lib345 Whole Blood Age: 35; Cellcount: 2000000; Celltype: CD4; Collectiondate: August 24 2012; Diseasestatus: MS posttreatment; Donorid: 56; Gender: F; Index: 21; Race: White; Samplename: 56_CD4T; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479557 Lib346 Whole Blood Age: 35; Cellcount: 1352936; Celltype: CD8; Collectiondate: August 24 2012; Diseasestatus: MS posttreatment; Donorid: 56; Gender: F; Index: 23; Race: White; Samplename: 56_CD8T; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479558 Lib347 Whole Blood Age: 35; Cellcount: 310438; Celltype: NK; Collectiondate: August 24 2012; Diseasestatus: MS posttreatment; Donorid: 56; Gender: F; Index: 9; Race: White; Samplename: 56_NK; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.
Unassigned Unassigned GSM1479559 Lib348 Whole Blood Age: 35; Cellcount: --; Celltype: Whole Blood; Collectiondate: August 24 2012; Diseasestatus: MS posttreatment; Donorid: 56; Gender: F; Index: 19; Race: White; Samplename: 56_Tempus; Smoker: N; Time since last flare (months): 1; Time since steroid dose: 1 month, IV; Time since symptom onset (yrs): 0.5; Years since diagnosis: -- No explicit case or control marker detected.

Use as Discovery Cohort

External Validation Finder

Carry Siftome's disease, organism, specimen, assay, data type, and accession into a validation project. Uncertain fields remain Unknown.