Matching samples

GSE65114 · Expression data from colonic mucosal biopsies from healthy controls and patients with active ulcerative colitis

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

16 case / 12 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (28)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM1587517

Uncertain

Human Colonic Mucus from the caecum of Healthy controls HC_33_CAEC

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
          • Supported by the indexed evidence.
          • specimen category excludes: Biofluid — Meets requirement
            • Supported by the indexed evidence.
            Source metadata
            Source name
            Human Colonic Mucin from Healthy controls
            Characteristics
            tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
            Description
            Not reported
            Indexed organism evidence
            INFERRED · PARENT_INHERITED: Not reported
            Indexed assay evidence
            INFERRED · PARENT_INHERITED: Not reported
            Source
            GEO
            Original indexed metadata
            sample_accession: GSM1587517
            sample_title: Human Colonic Mucus from the caecum of Healthy controls  HC_33_CAEC
            source_name: Human Colonic Mucin from Healthy controls
            characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Caecum

            GSM1587518

            Uncertain

            Human Colonic Mucin from the left colon of Healthy controls HC_33_LEFT

            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

            Requirements and decision evidence
            • organism: Homo sapiens — Insufficient evidence
              • The required value is not reported.
              • assay type: bulk RNA-seq — Insufficient evidence
                • The required value is not reported.
                • specimen category: Tissue or biopsy — Insufficient evidence
                  • The required value is not reported.
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Meets requirement
                      • Supported by the indexed evidence.
                      Source metadata
                      Source name
                      Human Colonic Mucin from Healthy controls
                      Characteristics
                      tissue source: Colon; disease state: Healthy controls; colonic location: Left
                      Description
                      Not reported
                      Indexed organism evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Indexed assay evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Source
                      GEO
                      Original indexed metadata
                      sample_accession: GSM1587518
                      sample_title: Human Colonic Mucin from the left colon of Healthy controls HC_33_LEFT
                      source_name: Human Colonic Mucin from Healthy controls
                      characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Left

                      GSM1587519

                      Uncertain

                      Human Colonic Mucin from the rectum of Healthy controls HC_33_RECT

                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                      Requirements and decision evidence
                      • organism: Homo sapiens — Insufficient evidence
                        • The required value is not reported.
                        • assay type: bulk RNA-seq — Insufficient evidence
                          • The required value is not reported.
                          • specimen category: Tissue or biopsy — Insufficient evidence
                            • The required value is not reported.
                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                              • Supported by the indexed evidence.
                              • specimen category excludes: Biofluid — Meets requirement
                                • Supported by the indexed evidence.
                                Source metadata
                                Source name
                                Human Colonic Mucin from Healthy controls
                                Characteristics
                                tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM1587519
                                sample_title: Human Colonic Mucin from the rectum of Healthy controls HC_33_RECT
                                source_name: Human Colonic Mucin from Healthy controls
                                characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Rectum

                                GSM1587520

                                Uncertain

                                Human Colonic Mucin from the transverse colon of Healthy controls HC_33_TRANS

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                        • Supported by the indexed evidence.
                                        • specimen category excludes: Biofluid — Meets requirement
                                          • Supported by the indexed evidence.
                                          Source metadata
                                          Source name
                                          Human Colonic Mucin from Healthy controls
                                          Characteristics
                                          tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
                                          Description
                                          Not reported
                                          Indexed organism evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Indexed assay evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Source
                                          GEO
                                          Original indexed metadata
                                          sample_accession: GSM1587520
                                          sample_title: Human Colonic Mucin from the transverse colon of Healthy controls HC_33_TRANS
                                          source_name: Human Colonic Mucin from Healthy controls
                                          characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Transverse

                                          GSM1587521

                                          Uncertain

                                          Human Colonic Mucin from the caecum of Healthy controls HC30_CAEC

                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                          Requirements and decision evidence
                                          • organism: Homo sapiens — Insufficient evidence
                                            • The required value is not reported.
                                            • assay type: bulk RNA-seq — Insufficient evidence
                                              • The required value is not reported.
                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                • The required value is not reported.
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Meets requirement
                                                    • Supported by the indexed evidence.
                                                    Source metadata
                                                    Source name
                                                    Human Colonic Mucin from Healthy controls
                                                    Characteristics
                                                    tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
                                                    Description
                                                    Not reported
                                                    Indexed organism evidence
                                                    INFERRED · PARENT_INHERITED: Not reported
                                                    Indexed assay evidence
                                                    INFERRED · PARENT_INHERITED: Not reported
                                                    Source
                                                    GEO
                                                    Original indexed metadata
                                                    sample_accession: GSM1587521
                                                    sample_title: Human Colonic Mucin from the caecum of Healthy controls HC30_CAEC
                                                    source_name: Human Colonic Mucin from Healthy controls
                                                    characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Caecum

                                                    GSM1587522

                                                    Uncertain

                                                    Human Colonic Mucin from Healthy controls HC30_LEFT

                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                    Requirements and decision evidence
                                                    • organism: Homo sapiens — Insufficient evidence
                                                      • The required value is not reported.
                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                        • The required value is not reported.
                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                          • The required value is not reported.
                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                            • Supported by the indexed evidence.
                                                            • specimen category excludes: Biofluid — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              Source metadata
                                                              Source name
                                                              Human Colonic Mucin from Healthy controls
                                                              Characteristics
                                                              tissue source: Colon; disease state: Healthy controls; colonic location: Left
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM1587522
                                                              sample_title: Human Colonic Mucin from Healthy controls HC30_LEFT
                                                              source_name: Human Colonic Mucin from Healthy controls
                                                              characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Left

                                                              GSM1587523

                                                              Uncertain

                                                              Human Colonic Mucin from Healthy controls HC30_RECT

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                      • Supported by the indexed evidence.
                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                        • Supported by the indexed evidence.
                                                                        Source metadata
                                                                        Source name
                                                                        Human Colonic Mucin from Healthy controls
                                                                        Characteristics
                                                                        tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
                                                                        Description
                                                                        Not reported
                                                                        Indexed organism evidence
                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                        Indexed assay evidence
                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                        Source
                                                                        GEO
                                                                        Original indexed metadata
                                                                        sample_accession: GSM1587523
                                                                        sample_title: Human Colonic Mucin from Healthy controls HC30_RECT
                                                                        source_name: Human Colonic Mucin from Healthy controls
                                                                        characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Rectum

                                                                        GSM1587524

                                                                        Uncertain

                                                                        Human Colonic Mucin from the transverse colon of Healthy controls HC30_TRANS

                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                        Requirements and decision evidence
                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                  • Supported by the indexed evidence.
                                                                                  Source metadata
                                                                                  Source name
                                                                                  Human Colonic Mucin from Healthy controls
                                                                                  Characteristics
                                                                                  tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
                                                                                  Description
                                                                                  Not reported
                                                                                  Indexed organism evidence
                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                  Indexed assay evidence
                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                  Source
                                                                                  GEO
                                                                                  Original indexed metadata
                                                                                  sample_accession: GSM1587524
                                                                                  sample_title: Human Colonic Mucin from the transverse colon of Healthy controls HC30_TRANS
                                                                                  source_name: Human Colonic Mucin from Healthy controls
                                                                                  characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Transverse

                                                                                  GSM1587525

                                                                                  Uncertain

                                                                                  Human Colonic Mucin from the caecum of Healthy controls HC31_CAEC

                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                  Requirements and decision evidence
                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                          • Supported by the indexed evidence.
                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            Source metadata
                                                                                            Source name
                                                                                            Human Colonic Mucin from Healthy controls
                                                                                            Characteristics
                                                                                            tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM1587525
                                                                                            sample_title: Human Colonic Mucin from the caecum of Healthy controls HC31_CAEC
                                                                                            source_name: Human Colonic Mucin from Healthy controls
                                                                                            characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Caecum

                                                                                            GSM1587526

                                                                                            Uncertain

                                                                                            Human Colonic Mucin from Healthy controls HC31_LEFT

                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                    • Supported by the indexed evidence.
                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                      • Supported by the indexed evidence.
                                                                                                      Source metadata
                                                                                                      Source name
                                                                                                      Human Colonic Mucin from Healthy controls
                                                                                                      Characteristics
                                                                                                      tissue source: Colon; disease state: Healthy controls; colonic location: Left
                                                                                                      Description
                                                                                                      Not reported
                                                                                                      Indexed organism evidence
                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                      Indexed assay evidence
                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                      Source
                                                                                                      GEO
                                                                                                      Original indexed metadata
                                                                                                      sample_accession: GSM1587526
                                                                                                      sample_title: Human Colonic Mucin from Healthy controls HC31_LEFT
                                                                                                      source_name: Human Colonic Mucin from Healthy controls
                                                                                                      characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Left

                                                                                                      GSM1587527

                                                                                                      Uncertain

                                                                                                      Human Colonic Mucin from Healthy controls HC31_RECT

                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                      Requirements and decision evidence
                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • specimen category excludes: Biofluid — Meets requirement
                                                                                                                • Supported by the indexed evidence.
                                                                                                                Source metadata
                                                                                                                Source name
                                                                                                                Human Colonic Mucin from Healthy controls
                                                                                                                Characteristics
                                                                                                                tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
                                                                                                                Description
                                                                                                                Not reported
                                                                                                                Indexed organism evidence
                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                Indexed assay evidence
                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                Source
                                                                                                                GEO
                                                                                                                Original indexed metadata
                                                                                                                sample_accession: GSM1587527
                                                                                                                sample_title: Human Colonic Mucin from Healthy controls HC31_RECT
                                                                                                                source_name: Human Colonic Mucin from Healthy controls
                                                                                                                characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Rectum

                                                                                                                GSM1587528

                                                                                                                Uncertain

                                                                                                                Human Colonic Mucin from the transverse colon of Healthy controls HC31_TRANS

                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                Requirements and decision evidence
                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                        • Supported by the indexed evidence.
                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          Source metadata
                                                                                                                          Source name
                                                                                                                          Human Colonic Mucin from Healthy controls
                                                                                                                          Characteristics
                                                                                                                          tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
                                                                                                                          Description
                                                                                                                          Not reported
                                                                                                                          Indexed organism evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Indexed assay evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Source
                                                                                                                          GEO
                                                                                                                          Original indexed metadata
                                                                                                                          sample_accession: GSM1587528
                                                                                                                          sample_title: Human Colonic Mucin from the transverse colon of Healthy controls HC31_TRANS
                                                                                                                          source_name: Human Colonic Mucin from Healthy controls
                                                                                                                          characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Transverse

                                                                                                                          GSM1587529

                                                                                                                          Uncertain

                                                                                                                          Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_20_CAEC

                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                          Requirements and decision evidence
                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                              • The required value is not reported.
                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                • The required value is not reported.
                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                  • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                    Source metadata
                                                                                                                                    Source name
                                                                                                                                    Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                    Characteristics
                                                                                                                                    tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
                                                                                                                                    Description
                                                                                                                                    Not reported
                                                                                                                                    Indexed organism evidence
                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                    Indexed assay evidence
                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                    Source
                                                                                                                                    GEO
                                                                                                                                    Original indexed metadata
                                                                                                                                    sample_accession: GSM1587529
                                                                                                                                    sample_title: Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_20_CAEC
                                                                                                                                    source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                    characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum

                                                                                                                                    GSM1587530

                                                                                                                                    Uncertain

                                                                                                                                    Human Colonic Mucin from patient with active ulcerative colitis AC_20_LEFT

                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                    Requirements and decision evidence
                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                      • The required value is not reported.
                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                          • The required value is not reported.
                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                            • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                              Source metadata
                                                                                                                                              Source name
                                                                                                                                              Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                              Characteristics
                                                                                                                                              tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
                                                                                                                                              Description
                                                                                                                                              Not reported
                                                                                                                                              Indexed organism evidence
                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                              Indexed assay evidence
                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                              Source
                                                                                                                                              GEO
                                                                                                                                              Original indexed metadata
                                                                                                                                              sample_accession: GSM1587530
                                                                                                                                              sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_20_LEFT
                                                                                                                                              source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                              characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left

                                                                                                                                              GSM1587531

                                                                                                                                              Uncertain

                                                                                                                                              Human Colonic Mucin from patient with active ulcerative colitis AC_20_RECT

                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                              Requirements and decision evidence
                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                • The required value is not reported.
                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                  • The required value is not reported.
                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                        Source metadata
                                                                                                                                                        Source name
                                                                                                                                                        Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                        Characteristics
                                                                                                                                                        tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
                                                                                                                                                        Description
                                                                                                                                                        Not reported
                                                                                                                                                        Indexed organism evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Indexed assay evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Source
                                                                                                                                                        GEO
                                                                                                                                                        Original indexed metadata
                                                                                                                                                        sample_accession: GSM1587531
                                                                                                                                                        sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_20_RECT
                                                                                                                                                        source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                        characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum

                                                                                                                                                        GSM1587532

                                                                                                                                                        Uncertain

                                                                                                                                                        Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_20_TRANS

                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                            • The required value is not reported.
                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                              • The required value is not reported.
                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                  Source metadata
                                                                                                                                                                  Source name
                                                                                                                                                                  Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                  Characteristics
                                                                                                                                                                  tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
                                                                                                                                                                  Description
                                                                                                                                                                  Not reported
                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                  Source
                                                                                                                                                                  GEO
                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                  sample_accession: GSM1587532
                                                                                                                                                                  sample_title: Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_20_TRANS
                                                                                                                                                                  source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                  characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse

                                                                                                                                                                  GSM1587533

                                                                                                                                                                  Uncertain

                                                                                                                                                                  Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_21_CAEC

                                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                            Source metadata
                                                                                                                                                                            Source name
                                                                                                                                                                            Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                            Characteristics
                                                                                                                                                                            tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
                                                                                                                                                                            Description
                                                                                                                                                                            Not reported
                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                            Source
                                                                                                                                                                            GEO
                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                            sample_accession: GSM1587533
                                                                                                                                                                            sample_title: Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_21_CAEC
                                                                                                                                                                            source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                            characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum

                                                                                                                                                                            GSM1587534

                                                                                                                                                                            Uncertain

                                                                                                                                                                            Human Colonic Mucin from patient with active ulcerative colitis AC_21_LEFT

                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                      Source metadata
                                                                                                                                                                                      Source name
                                                                                                                                                                                      Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                      Characteristics
                                                                                                                                                                                      tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
                                                                                                                                                                                      Description
                                                                                                                                                                                      Not reported
                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Source
                                                                                                                                                                                      GEO
                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                      sample_accession: GSM1587534
                                                                                                                                                                                      sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_21_LEFT
                                                                                                                                                                                      source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                      characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left

                                                                                                                                                                                      GSM1587535

                                                                                                                                                                                      Uncertain

                                                                                                                                                                                      Human Colonic Mucin from patient with active ulcerative colitis AC_21_RECT

                                                                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                      Requirements and decision evidence
                                                                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                              • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                Source name
                                                                                                                                                                                                Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
                                                                                                                                                                                                Description
                                                                                                                                                                                                Not reported
                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                Source
                                                                                                                                                                                                GEO
                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                sample_accession: GSM1587535
                                                                                                                                                                                                sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_21_RECT
                                                                                                                                                                                                source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum

                                                                                                                                                                                                GSM1587536

                                                                                                                                                                                                Uncertain

                                                                                                                                                                                                Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_21_TRANS

                                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                          Source metadata
                                                                                                                                                                                                          Source name
                                                                                                                                                                                                          Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                          Characteristics
                                                                                                                                                                                                          tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
                                                                                                                                                                                                          Description
                                                                                                                                                                                                          Not reported
                                                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                          Source
                                                                                                                                                                                                          GEO
                                                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                                                          sample_accession: GSM1587536
                                                                                                                                                                                                          sample_title: Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_21_TRANS
                                                                                                                                                                                                          source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                          characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse

                                                                                                                                                                                                          GSM1587537

                                                                                                                                                                                                          Uncertain

                                                                                                                                                                                                          Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_26_CAEC

                                                                                                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                          Requirements and decision evidence
                                                                                                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                                  • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                    Source metadata
                                                                                                                                                                                                                    Source name
                                                                                                                                                                                                                    Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                    Characteristics
                                                                                                                                                                                                                    tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
                                                                                                                                                                                                                    Description
                                                                                                                                                                                                                    Not reported
                                                                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                    Source
                                                                                                                                                                                                                    GEO
                                                                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                                                                    sample_accession: GSM1587537
                                                                                                                                                                                                                    sample_title: Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_26_CAEC
                                                                                                                                                                                                                    source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                    characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum

                                                                                                                                                                                                                    GSM1587538

                                                                                                                                                                                                                    Uncertain

                                                                                                                                                                                                                    Human Colonic Mucin from patient with active ulcerative colitis AC_26_LEFT

                                                                                                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                    Requirements and decision evidence
                                                                                                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                                                            • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                                                              Source metadata
                                                                                                                                                                                                                              Source name
                                                                                                                                                                                                                              Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                              Characteristics
                                                                                                                                                                                                                              tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
                                                                                                                                                                                                                              Description
                                                                                                                                                                                                                              Not reported
                                                                                                                                                                                                                              Indexed organism evidence
                                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                              Indexed assay evidence
                                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                              Source
                                                                                                                                                                                                                              GEO
                                                                                                                                                                                                                              Original indexed metadata
                                                                                                                                                                                                                              sample_accession: GSM1587538
                                                                                                                                                                                                                              sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_26_LEFT
                                                                                                                                                                                                                              source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                              characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left

                                                                                                                                                                                                                              GSM1587539

                                                                                                                                                                                                                              Uncertain

                                                                                                                                                                                                                              Human Colonic Mucin from patient with active ulcerative colitis AC_26_RECT

                                                                                                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                              Requirements and decision evidence
                                                                                                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                                                        Source metadata
                                                                                                                                                                                                                                        Source name
                                                                                                                                                                                                                                        Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                        Characteristics
                                                                                                                                                                                                                                        tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
                                                                                                                                                                                                                                        Description
                                                                                                                                                                                                                                        Not reported
                                                                                                                                                                                                                                        Indexed organism evidence
                                                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                        Indexed assay evidence
                                                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                        Source
                                                                                                                                                                                                                                        GEO
                                                                                                                                                                                                                                        Original indexed metadata
                                                                                                                                                                                                                                        sample_accession: GSM1587539
                                                                                                                                                                                                                                        sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_26_RECT
                                                                                                                                                                                                                                        source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                        characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum

                                                                                                                                                                                                                                        GSM1587540

                                                                                                                                                                                                                                        Uncertain

                                                                                                                                                                                                                                        Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_26_TRANS

                                                                                                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                                                                  Source metadata
                                                                                                                                                                                                                                                  Source name
                                                                                                                                                                                                                                                  Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                  Characteristics
                                                                                                                                                                                                                                                  tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
                                                                                                                                                                                                                                                  Description
                                                                                                                                                                                                                                                  Not reported
                                                                                                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                  Source
                                                                                                                                                                                                                                                  GEO
                                                                                                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                                                                                                  sample_accession: GSM1587540
                                                                                                                                                                                                                                                  sample_title: Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_26_TRANS
                                                                                                                                                                                                                                                  source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                  characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse

                                                                                                                                                                                                                                                  GSM1587541

                                                                                                                                                                                                                                                  Uncertain

                                                                                                                                                                                                                                                  Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_28_CAEC

                                                                                                                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                                                                                            Source metadata
                                                                                                                                                                                                                                                            Source name
                                                                                                                                                                                                                                                            Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                            Characteristics
                                                                                                                                                                                                                                                            tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
                                                                                                                                                                                                                                                            Description
                                                                                                                                                                                                                                                            Not reported
                                                                                                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                            Source
                                                                                                                                                                                                                                                            GEO
                                                                                                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                                                                                                            sample_accession: GSM1587541
                                                                                                                                                                                                                                                            sample_title: Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_28_CAEC
                                                                                                                                                                                                                                                            source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                            characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum

                                                                                                                                                                                                                                                            GSM1587542

                                                                                                                                                                                                                                                            Uncertain

                                                                                                                                                                                                                                                            Human Colonic Mucin from patient with active ulcerative colitis AC_28_LEFT

                                                                                                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                      Source metadata
                                                                                                                                                                                                                                                                      Source name
                                                                                                                                                                                                                                                                      Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                                      Characteristics
                                                                                                                                                                                                                                                                      tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
                                                                                                                                                                                                                                                                      Description
                                                                                                                                                                                                                                                                      Not reported
                                                                                                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                      Source
                                                                                                                                                                                                                                                                      GEO
                                                                                                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                                                                                                      sample_accession: GSM1587542
                                                                                                                                                                                                                                                                      sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_28_LEFT
                                                                                                                                                                                                                                                                      source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                                      characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left

                                                                                                                                                                                                                                                                      GSM1587543

                                                                                                                                                                                                                                                                      Uncertain

                                                                                                                                                                                                                                                                      Human Colonic Mucin from patient with active ulcerative colitis AC_28_RECT

                                                                                                                                                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                                      Requirements and decision evidence
                                                                                                                                                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                              • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                                                                                                Source name
                                                                                                                                                                                                                                                                                Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                                                                                                tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
                                                                                                                                                                                                                                                                                Description
                                                                                                                                                                                                                                                                                Not reported
                                                                                                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                Source
                                                                                                                                                                                                                                                                                GEO
                                                                                                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                                                                                                sample_accession: GSM1587543
                                                                                                                                                                                                                                                                                sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_28_RECT
                                                                                                                                                                                                                                                                                source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                                                characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum

                                                                                                                                                                                                                                                                                GSM1587544

                                                                                                                                                                                                                                                                                Uncertain

                                                                                                                                                                                                                                                                                Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_28_TRANS

                                                                                                                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                          Source metadata
                                                                                                                                                                                                                                                                                          Source name
                                                                                                                                                                                                                                                                                          Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                                                          Characteristics
                                                                                                                                                                                                                                                                                          tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
                                                                                                                                                                                                                                                                                          Description
                                                                                                                                                                                                                                                                                          Not reported
                                                                                                                                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                          Source
                                                                                                                                                                                                                                                                                          GEO
                                                                                                                                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                                                                                                                                          sample_accession: GSM1587544
                                                                                                                                                                                                                                                                                          sample_title: Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_28_TRANS
                                                                                                                                                                                                                                                                                          source_name: Human Colonic Mucin from patient with active ulcerative colitis
                                                                                                                                                                                                                                                                                          characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse

                                                                                                                                                                                                                                                                                          Excluded samples (0)

                                                                                                                                                                                                                                                                                          No excluded samples.