These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.
Human Colonic Mucus from the caecum of Healthy controls HC_33_CAEC
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587517
sample_title: Human Colonic Mucus from the caecum of Healthy controls HC_33_CAEC
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
Human Colonic Mucin from the left colon of Healthy controls HC_33_LEFT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Left
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587518
sample_title: Human Colonic Mucin from the left colon of Healthy controls HC_33_LEFT
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Left
Human Colonic Mucin from the rectum of Healthy controls HC_33_RECT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587519
sample_title: Human Colonic Mucin from the rectum of Healthy controls HC_33_RECT
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
Human Colonic Mucin from the transverse colon of Healthy controls HC_33_TRANS
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587520
sample_title: Human Colonic Mucin from the transverse colon of Healthy controls HC_33_TRANS
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
Human Colonic Mucin from the caecum of Healthy controls HC30_CAEC
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587521
sample_title: Human Colonic Mucin from the caecum of Healthy controls HC30_CAEC
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
Human Colonic Mucin from Healthy controls HC30_LEFT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Left
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587522
sample_title: Human Colonic Mucin from Healthy controls HC30_LEFT
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Left
Human Colonic Mucin from Healthy controls HC30_RECT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587523
sample_title: Human Colonic Mucin from Healthy controls HC30_RECT
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
Human Colonic Mucin from the transverse colon of Healthy controls HC30_TRANS
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587524
sample_title: Human Colonic Mucin from the transverse colon of Healthy controls HC30_TRANS
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
Human Colonic Mucin from the caecum of Healthy controls HC31_CAEC
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587525
sample_title: Human Colonic Mucin from the caecum of Healthy controls HC31_CAEC
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Caecum
Human Colonic Mucin from Healthy controls HC31_LEFT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Left
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587526
sample_title: Human Colonic Mucin from Healthy controls HC31_LEFT
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Left
Human Colonic Mucin from Healthy controls HC31_RECT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587527
sample_title: Human Colonic Mucin from Healthy controls HC31_RECT
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Rectum
Human Colonic Mucin from the transverse colon of Healthy controls HC31_TRANS
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from Healthy controls
- Characteristics
- tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587528
sample_title: Human Colonic Mucin from the transverse colon of Healthy controls HC31_TRANS
source_name: Human Colonic Mucin from Healthy controls
characteristics: tissue source: Colon; disease state: Healthy controls; colonic location: Transverse
Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_20_CAEC
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587529
sample_title: Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_20_CAEC
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
Human Colonic Mucin from patient with active ulcerative colitis AC_20_LEFT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587530
sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_20_LEFT
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
Human Colonic Mucin from patient with active ulcerative colitis AC_20_RECT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587531
sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_20_RECT
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_20_TRANS
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587532
sample_title: Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_20_TRANS
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_21_CAEC
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587533
sample_title: Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_21_CAEC
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
Human Colonic Mucin from patient with active ulcerative colitis AC_21_LEFT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587534
sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_21_LEFT
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
Human Colonic Mucin from patient with active ulcerative colitis AC_21_RECT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587535
sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_21_RECT
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_21_TRANS
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587536
sample_title: Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_21_TRANS
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_26_CAEC
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587537
sample_title: Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_26_CAEC
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
Human Colonic Mucin from patient with active ulcerative colitis AC_26_LEFT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587538
sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_26_LEFT
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
Human Colonic Mucin from patient with active ulcerative colitis AC_26_RECT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587539
sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_26_RECT
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_26_TRANS
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587540
sample_title: Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_26_TRANS
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_28_CAEC
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587541
sample_title: Human Colonic Mucin from the caecum of patient with active ulcerative colitis AC_28_CAEC
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Caecum
Human Colonic Mucin from patient with active ulcerative colitis AC_28_LEFT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587542
sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_28_LEFT
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Left
Human Colonic Mucin from patient with active ulcerative colitis AC_28_RECT
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587543
sample_title: Human Colonic Mucin from patient with active ulcerative colitis AC_28_RECT
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Rectum
Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_28_TRANS
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Meets requirement
- Supported by the indexed evidence.
Source metadata
- Source name
- Human Colonic Mucin from patient with active ulcerative colitis
- Characteristics
- tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM1587544
sample_title: Human Colonic Mucin from the transverse colon of patient with active ulcerative colitis AC_28_TRANS
source_name: Human Colonic Mucin from patient with active ulcerative colitis
characteristics: tissue source: Colon; disease state: active ulcerative colitis; colonic location: Transverse