Matching samples

GSE66207 · mRNA and small RNA associated with Crohn's disease behavior [RNA-Seq]

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

20 case / 13 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (33)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM1616912

Uncertain

B2/stricturing Crohn's disease [RNA-Seq, 20_CD_NI_B2]

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
          • Supported by the indexed evidence.
          • specimen category excludes: Biofluid — Meets requirement
            • Supported by the indexed evidence.
            Source metadata
            Source name
            Colon
            Characteristics
            age: 15; Sex: male; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A1L1B2
            Description
            Not reported
            Indexed organism evidence
            INFERRED · PARENT_INHERITED: Not reported
            Indexed assay evidence
            INFERRED · PARENT_INHERITED: Not reported
            Source
            GEO
            Original indexed metadata
            sample_accession: GSM1616912
            sample_title: B2/stricturing Crohn's disease [RNA-Seq, 20_CD_NI_B2]
            source_name: Colon
            characteristics: age: 15; Sex: male; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A1L1B2

            GSM1616913

            Uncertain

            B2/stricturing Crohn's disease [RNA-Seq, 21_CD_NI_B2]

            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

            Requirements and decision evidence
            • organism: Homo sapiens — Insufficient evidence
              • The required value is not reported.
              • assay type: bulk RNA-seq — Insufficient evidence
                • The required value is not reported.
                • specimen category: Tissue or biopsy — Insufficient evidence
                  • The required value is not reported.
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Meets requirement
                      • Supported by the indexed evidence.
                      Source metadata
                      Source name
                      Colon
                      Characteristics
                      age: 51; Sex: female; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A2L2B2
                      Description
                      Not reported
                      Indexed organism evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Indexed assay evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Source
                      GEO
                      Original indexed metadata
                      sample_accession: GSM1616913
                      sample_title: B2/stricturing Crohn's disease [RNA-Seq, 21_CD_NI_B2]
                      source_name: Colon
                      characteristics: age: 51; Sex: female; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A2L2B2

                      GSM1616914

                      Uncertain

                      B3/penetrating Crohn's disease [RNA-Seq, 29_CD_NI_B3]

                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                      Requirements and decision evidence
                      • organism: Homo sapiens — Insufficient evidence
                        • The required value is not reported.
                        • assay type: bulk RNA-seq — Insufficient evidence
                          • The required value is not reported.
                          • specimen category: Tissue or biopsy — Insufficient evidence
                            • The required value is not reported.
                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                              • Supported by the indexed evidence.
                              • specimen category excludes: Biofluid — Meets requirement
                                • Supported by the indexed evidence.
                                Source metadata
                                Source name
                                Colon
                                Characteristics
                                age: 59; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM1616914
                                sample_title: B3/penetrating Crohn's disease [RNA-Seq, 29_CD_NI_B3]
                                source_name: Colon
                                characteristics: age: 59; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3

                                GSM1616915

                                Uncertain

                                B2/stricturing Crohn's disease [RNA-Seq, 51_CD_NI_B2]

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                        • Supported by the indexed evidence.
                                        • specimen category excludes: Biofluid — Meets requirement
                                          • Supported by the indexed evidence.
                                          Source metadata
                                          Source name
                                          Colon
                                          Characteristics
                                          age: 30; Sex: female; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A2L3B2
                                          Description
                                          Not reported
                                          Indexed organism evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Indexed assay evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Source
                                          GEO
                                          Original indexed metadata
                                          sample_accession: GSM1616915
                                          sample_title: B2/stricturing Crohn's disease [RNA-Seq, 51_CD_NI_B2]
                                          source_name: Colon
                                          characteristics: age: 30; Sex: female; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A2L3B2

                                          GSM1616916

                                          Uncertain

                                          B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 54_CD_NI_B1]

                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                          Requirements and decision evidence
                                          • organism: Homo sapiens — Insufficient evidence
                                            • The required value is not reported.
                                            • assay type: bulk RNA-seq — Insufficient evidence
                                              • The required value is not reported.
                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                • The required value is not reported.
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Meets requirement
                                                    • Supported by the indexed evidence.
                                                    Source metadata
                                                    Source name
                                                    Colon
                                                    Characteristics
                                                    age: 20; Sex: male; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A1L2B1
                                                    Description
                                                    Not reported
                                                    Indexed organism evidence
                                                    INFERRED · PARENT_INHERITED: Not reported
                                                    Indexed assay evidence
                                                    INFERRED · PARENT_INHERITED: Not reported
                                                    Source
                                                    GEO
                                                    Original indexed metadata
                                                    sample_accession: GSM1616916
                                                    sample_title: B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 54_CD_NI_B1]
                                                    source_name: Colon
                                                    characteristics: age: 20; Sex: male; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A1L2B1

                                                    GSM1616917

                                                    Uncertain

                                                    B3/penetrating Crohn's disease [RNA-Seq, 62_CD_NI_B3]

                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                    Requirements and decision evidence
                                                    • organism: Homo sapiens — Insufficient evidence
                                                      • The required value is not reported.
                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                        • The required value is not reported.
                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                          • The required value is not reported.
                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                            • Supported by the indexed evidence.
                                                            • specimen category excludes: Biofluid — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              Source metadata
                                                              Source name
                                                              Colon
                                                              Characteristics
                                                              age: 45; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM1616917
                                                              sample_title: B3/penetrating Crohn's disease [RNA-Seq, 62_CD_NI_B3]
                                                              source_name: Colon
                                                              characteristics: age: 45; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3

                                                              GSM1616918

                                                              Uncertain

                                                              B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 63_CD_NI_B1]

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                      • Supported by the indexed evidence.
                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                        • Supported by the indexed evidence.
                                                                        Source metadata
                                                                        Source name
                                                                        Colon
                                                                        Characteristics
                                                                        age: 49; Sex: male; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A1L3B1
                                                                        Description
                                                                        Not reported
                                                                        Indexed organism evidence
                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                        Indexed assay evidence
                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                        Source
                                                                        GEO
                                                                        Original indexed metadata
                                                                        sample_accession: GSM1616918
                                                                        sample_title: B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 63_CD_NI_B1]
                                                                        source_name: Colon
                                                                        characteristics: age: 49; Sex: male; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A1L3B1

                                                                        GSM1616919

                                                                        Uncertain

                                                                        B3/penetrating Crohn's disease [RNA-Seq, 64_CD_NI_B3]

                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                        Requirements and decision evidence
                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                  • Supported by the indexed evidence.
                                                                                  Source metadata
                                                                                  Source name
                                                                                  Colon
                                                                                  Characteristics
                                                                                  age: 49; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3
                                                                                  Description
                                                                                  Not reported
                                                                                  Indexed organism evidence
                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                  Indexed assay evidence
                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                  Source
                                                                                  GEO
                                                                                  Original indexed metadata
                                                                                  sample_accession: GSM1616919
                                                                                  sample_title: B3/penetrating Crohn's disease [RNA-Seq, 64_CD_NI_B3]
                                                                                  source_name: Colon
                                                                                  characteristics: age: 49; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3

                                                                                  GSM1616920

                                                                                  Uncertain

                                                                                  B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 405_CD_NI_B1]

                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                  Requirements and decision evidence
                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                          • Supported by the indexed evidence.
                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            Source metadata
                                                                                            Source name
                                                                                            Colon
                                                                                            Characteristics
                                                                                            age: 56; Sex: female; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A2L2B1
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM1616920
                                                                                            sample_title: B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 405_CD_NI_B1]
                                                                                            source_name: Colon
                                                                                            characteristics: age: 56; Sex: female; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A2L2B1

                                                                                            GSM1616921

                                                                                            Uncertain

                                                                                            B3/penetrating Crohn's disease [RNA-Seq, 407_CD_NI_B3]

                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                    • Supported by the indexed evidence.
                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                      • Supported by the indexed evidence.
                                                                                                      Source metadata
                                                                                                      Source name
                                                                                                      Colon
                                                                                                      Characteristics
                                                                                                      age: 43; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L2B3p
                                                                                                      Description
                                                                                                      Not reported
                                                                                                      Indexed organism evidence
                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                      Indexed assay evidence
                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                      Source
                                                                                                      GEO
                                                                                                      Original indexed metadata
                                                                                                      sample_accession: GSM1616921
                                                                                                      sample_title: B3/penetrating Crohn's disease [RNA-Seq, 407_CD_NI_B3]
                                                                                                      source_name: Colon
                                                                                                      characteristics: age: 43; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L2B3p

                                                                                                      GSM1616922

                                                                                                      Uncertain

                                                                                                      B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 408_CD_NI_B1]

                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                      Requirements and decision evidence
                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • specimen category excludes: Biofluid — Meets requirement
                                                                                                                • Supported by the indexed evidence.
                                                                                                                Source metadata
                                                                                                                Source name
                                                                                                                Colon
                                                                                                                Characteristics
                                                                                                                age: 23; Sex: female; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A2L2B1
                                                                                                                Description
                                                                                                                Not reported
                                                                                                                Indexed organism evidence
                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                Indexed assay evidence
                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                Source
                                                                                                                GEO
                                                                                                                Original indexed metadata
                                                                                                                sample_accession: GSM1616922
                                                                                                                sample_title: B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 408_CD_NI_B1]
                                                                                                                source_name: Colon
                                                                                                                characteristics: age: 23; Sex: female; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A2L2B1

                                                                                                                GSM1616923

                                                                                                                Uncertain

                                                                                                                B3/penetrating Crohn's disease [RNA-Seq, 413_CD_NI_B1]

                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                Requirements and decision evidence
                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                        • Supported by the indexed evidence.
                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          Source metadata
                                                                                                                          Source name
                                                                                                                          Colon
                                                                                                                          Characteristics
                                                                                                                          age: 32; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L2B1
                                                                                                                          Description
                                                                                                                          Not reported
                                                                                                                          Indexed organism evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Indexed assay evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Source
                                                                                                                          GEO
                                                                                                                          Original indexed metadata
                                                                                                                          sample_accession: GSM1616923
                                                                                                                          sample_title: B3/penetrating Crohn's disease [RNA-Seq, 413_CD_NI_B1]
                                                                                                                          source_name: Colon
                                                                                                                          characteristics: age: 32; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L2B1

                                                                                                                          GSM1616924

                                                                                                                          Uncertain

                                                                                                                          B2/stricturing Crohn's disease [RNA-Seq, 420_CD_NI_B2]

                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                          Requirements and decision evidence
                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                              • The required value is not reported.
                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                • The required value is not reported.
                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                  • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                    Source metadata
                                                                                                                                    Source name
                                                                                                                                    Colon
                                                                                                                                    Characteristics
                                                                                                                                    age: 37; Sex: female; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A2L2B2p
                                                                                                                                    Description
                                                                                                                                    Not reported
                                                                                                                                    Indexed organism evidence
                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                    Indexed assay evidence
                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                    Source
                                                                                                                                    GEO
                                                                                                                                    Original indexed metadata
                                                                                                                                    sample_accession: GSM1616924
                                                                                                                                    sample_title: B2/stricturing Crohn's disease [RNA-Seq, 420_CD_NI_B2]
                                                                                                                                    source_name: Colon
                                                                                                                                    characteristics: age: 37; Sex: female; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A2L2B2p

                                                                                                                                    GSM1616925

                                                                                                                                    Uncertain

                                                                                                                                    B2/stricturing Crohn's disease [RNA-Seq, 422_CD_NI_B2]

                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                    Requirements and decision evidence
                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                      • The required value is not reported.
                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                          • The required value is not reported.
                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                            • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                              Source metadata
                                                                                                                                              Source name
                                                                                                                                              Colon
                                                                                                                                              Characteristics
                                                                                                                                              age: 21; Sex: female; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A1L3B2
                                                                                                                                              Description
                                                                                                                                              Not reported
                                                                                                                                              Indexed organism evidence
                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                              Indexed assay evidence
                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                              Source
                                                                                                                                              GEO
                                                                                                                                              Original indexed metadata
                                                                                                                                              sample_accession: GSM1616925
                                                                                                                                              sample_title: B2/stricturing Crohn's disease [RNA-Seq, 422_CD_NI_B2]
                                                                                                                                              source_name: Colon
                                                                                                                                              characteristics: age: 21; Sex: female; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A1L3B2

                                                                                                                                              GSM1616926

                                                                                                                                              Uncertain

                                                                                                                                              B3/penetrating Crohn's disease [RNA-Seq, 424_CD_NI_B3]

                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                              Requirements and decision evidence
                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                • The required value is not reported.
                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                  • The required value is not reported.
                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                        Source metadata
                                                                                                                                                        Source name
                                                                                                                                                        Colon
                                                                                                                                                        Characteristics
                                                                                                                                                        age: 34; Sex: male; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3
                                                                                                                                                        Description
                                                                                                                                                        Not reported
                                                                                                                                                        Indexed organism evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Indexed assay evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Source
                                                                                                                                                        GEO
                                                                                                                                                        Original indexed metadata
                                                                                                                                                        sample_accession: GSM1616926
                                                                                                                                                        sample_title: B3/penetrating Crohn's disease [RNA-Seq, 424_CD_NI_B3]
                                                                                                                                                        source_name: Colon
                                                                                                                                                        characteristics: age: 34; Sex: male; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3

                                                                                                                                                        GSM1616927

                                                                                                                                                        Uncertain

                                                                                                                                                        B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 429_CD_NI_B1]

                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                            • The required value is not reported.
                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                              • The required value is not reported.
                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                  Source metadata
                                                                                                                                                                  Source name
                                                                                                                                                                  Colon
                                                                                                                                                                  Characteristics
                                                                                                                                                                  age: 25; Sex: female; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A2L3B1
                                                                                                                                                                  Description
                                                                                                                                                                  Not reported
                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                  Source
                                                                                                                                                                  GEO
                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                  sample_accession: GSM1616927
                                                                                                                                                                  sample_title: B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 429_CD_NI_B1]
                                                                                                                                                                  source_name: Colon
                                                                                                                                                                  characteristics: age: 25; Sex: female; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A2L3B1

                                                                                                                                                                  GSM1616928

                                                                                                                                                                  Uncertain

                                                                                                                                                                  B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 431_CD_NI_B1]

                                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                            Source metadata
                                                                                                                                                                            Source name
                                                                                                                                                                            Colon
                                                                                                                                                                            Characteristics
                                                                                                                                                                            age: 20; Sex: female; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A1L2B1
                                                                                                                                                                            Description
                                                                                                                                                                            Not reported
                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                            Source
                                                                                                                                                                            GEO
                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                            sample_accession: GSM1616928
                                                                                                                                                                            sample_title: B1/non-strituring, non-penetrating Crohn's disease [RNA-Seq, 431_CD_NI_B1]
                                                                                                                                                                            source_name: Colon
                                                                                                                                                                            characteristics: age: 20; Sex: female; disease: Crohn's Disease; disease_stage: B1/non-strictuing, non-penetrating; inflamed: No; montreal classification: A1L2B1

                                                                                                                                                                            GSM1616929

                                                                                                                                                                            Uncertain

                                                                                                                                                                            B3/penetrating Crohn's disease [RNA-Seq, 434_CD_NI_B3]

                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                      Source metadata
                                                                                                                                                                                      Source name
                                                                                                                                                                                      Colon
                                                                                                                                                                                      Characteristics
                                                                                                                                                                                      age: 31; Sex: male; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3
                                                                                                                                                                                      Description
                                                                                                                                                                                      Not reported
                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Source
                                                                                                                                                                                      GEO
                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                      sample_accession: GSM1616929
                                                                                                                                                                                      sample_title: B3/penetrating Crohn's disease [RNA-Seq, 434_CD_NI_B3]
                                                                                                                                                                                      source_name: Colon
                                                                                                                                                                                      characteristics: age: 31; Sex: male; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L3B3

                                                                                                                                                                                      GSM1616930

                                                                                                                                                                                      Uncertain

                                                                                                                                                                                      B2/stricturing Crohn's disease [RNA-Seq, 440_CD_NI_B2]

                                                                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                      Requirements and decision evidence
                                                                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                              • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                Source name
                                                                                                                                                                                                Colon
                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                age: 76; Sex: male; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A2L3B2
                                                                                                                                                                                                Description
                                                                                                                                                                                                Not reported
                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                Source
                                                                                                                                                                                                GEO
                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                sample_accession: GSM1616930
                                                                                                                                                                                                sample_title: B2/stricturing Crohn's disease [RNA-Seq, 440_CD_NI_B2]
                                                                                                                                                                                                source_name: Colon
                                                                                                                                                                                                characteristics: age: 76; Sex: male; disease: Crohn's Disease; disease_stage: B2/stricturing; inflamed: No; montreal classification: A2L3B2

                                                                                                                                                                                                GSM1616931

                                                                                                                                                                                                Uncertain

                                                                                                                                                                                                B3/penetrating Crohn's disease [RNA-Seq, 450_CD_NI_B3]

                                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                          Source metadata
                                                                                                                                                                                                          Source name
                                                                                                                                                                                                          Colon
                                                                                                                                                                                                          Characteristics
                                                                                                                                                                                                          age: 28; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L1B3
                                                                                                                                                                                                          Description
                                                                                                                                                                                                          Not reported
                                                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                          Source
                                                                                                                                                                                                          GEO
                                                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                                                          sample_accession: GSM1616931
                                                                                                                                                                                                          sample_title: B3/penetrating Crohn's disease [RNA-Seq, 450_CD_NI_B3]
                                                                                                                                                                                                          source_name: Colon
                                                                                                                                                                                                          characteristics: age: 28; Sex: female; disease: Crohn's Disease; disease_stage: B3/penetrating; inflamed: No; montreal classification: A2L1B3

                                                                                                                                                                                                          GSM1616932

                                                                                                                                                                                                          Uncertain

                                                                                                                                                                                                          Normal colon biopsy, female age 53 [RNA-Seq, 22_NIBD_NI]

                                                                                                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                          Requirements and decision evidence
                                                                                                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                • Normal colon biopsy, female age 53 [RNA-Seq, 22_NIBD_NI] Colon age: 53; Sex: female; disease: Normal; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                • Normal colon biopsy, female age 53 [RNA-Seq, 22_NIBD_NI] Colon age: 53; Sex: female; disease: Normal; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                  • Normal colon biopsy, female age 53 [RNA-Seq, 22_NIBD_NI] Colon age: 53; Sex: female; disease: Normal; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                  • Normal colon biopsy, female age 53 [RNA-Seq, 22_NIBD_NI] Colon age: 53; Sex: female; disease: Normal; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                                Source name
                                                                                                                                                                                                                Colon
                                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                                age: 53; Sex: female; disease: Normal; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                Description
                                                                                                                                                                                                                Not reported
                                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                Source
                                                                                                                                                                                                                GEO
                                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                                sample_accession: GSM1616932
                                                                                                                                                                                                                sample_title: Normal colon biopsy, female age 53 [RNA-Seq, 22_NIBD_NI]
                                                                                                                                                                                                                source_name: Colon
                                                                                                                                                                                                                characteristics: age: 53; Sex: female; disease: Normal; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                GSM1616933

                                                                                                                                                                                                                Uncertain

                                                                                                                                                                                                                Normal colon acquired during Hartmann reversal after colon cancer, male age 52 [RNA-Seq, 23_NIBD_NI]

                                                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                          Source metadata
                                                                                                                                                                                                                          Source name
                                                                                                                                                                                                                          Colon
                                                                                                                                                                                                                          Characteristics
                                                                                                                                                                                                                          age: 52; Sex: male; disease: Normal, Hartmann reversal after colon cancer; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                          Description
                                                                                                                                                                                                                          Not reported
                                                                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                          Source
                                                                                                                                                                                                                          GEO
                                                                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                                                                          sample_accession: GSM1616933
                                                                                                                                                                                                                          sample_title: Normal colon acquired during Hartmann reversal after colon cancer, male age 52 [RNA-Seq, 23_NIBD_NI]
                                                                                                                                                                                                                          source_name: Colon
                                                                                                                                                                                                                          characteristics: age: 52; Sex: male; disease: Normal, Hartmann reversal after colon cancer; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                          GSM1616934

                                                                                                                                                                                                                          Uncertain

                                                                                                                                                                                                                          Normal colon biopsy acquired during surgery for diverticulitis,female age 60 [RNA-Seq, 25_NIBD_NI]

                                                                                                                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                          Requirements and decision evidence
                                                                                                                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                • Normal colon biopsy acquired during surgery for diverticulitis,female age 60 [RNA-Seq, 25_NIBD_NI] Colon age: 60; Sex: female; disease: Normal, diverticulitis; disease_stage: NA...
                                                                                                                                                                                                                                • Normal colon biopsy acquired during surgery for diverticulitis,female age 60 [RNA-Seq, 25_NIBD_NI] Colon age: 60; Sex: female; disease: Normal, diverticulitis; disease_stage: NA...
                                                                                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                  • Normal colon biopsy acquired during surgery for diverticulitis,female age 60 [RNA-Seq, 25_NIBD_NI] Colon age: 60; Sex: female; disease: Normal, diverticulitis; disease_stage: NA...
                                                                                                                                                                                                                                  • Normal colon biopsy acquired during surgery for diverticulitis,female age 60 [RNA-Seq, 25_NIBD_NI] Colon age: 60; Sex: female; disease: Normal, diverticulitis; disease_stage: NA...
                                                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                                                Source name
                                                                                                                                                                                                                                Colon
                                                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                                                age: 60; Sex: female; disease: Normal, diverticulitis; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                Description
                                                                                                                                                                                                                                Not reported
                                                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                Source
                                                                                                                                                                                                                                GEO
                                                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                                                sample_accession: GSM1616934
                                                                                                                                                                                                                                sample_title: Normal colon biopsy acquired during surgery for diverticulitis,female age 60 [RNA-Seq, 25_NIBD_NI]
                                                                                                                                                                                                                                source_name: Colon
                                                                                                                                                                                                                                characteristics: age: 60; Sex: female; disease: Normal, diverticulitis; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                GSM1616935

                                                                                                                                                                                                                                Uncertain

                                                                                                                                                                                                                                Normal colon acquired during surgery for diverticulitis, male age 70 [RNA-Seq, 27_NIBD_NI]

                                                                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                                          Source metadata
                                                                                                                                                                                                                                          Source name
                                                                                                                                                                                                                                          Colon
                                                                                                                                                                                                                                          Characteristics
                                                                                                                                                                                                                                          age: 70; Sex: male; disease: Normal, diverticulitis; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                          Description
                                                                                                                                                                                                                                          Not reported
                                                                                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                          Source
                                                                                                                                                                                                                                          GEO
                                                                                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                                                                                          sample_accession: GSM1616935
                                                                                                                                                                                                                                          sample_title: Normal colon acquired during surgery for diverticulitis, male age 70 [RNA-Seq, 27_NIBD_NI]
                                                                                                                                                                                                                                          source_name: Colon
                                                                                                                                                                                                                                          characteristics: age: 70; Sex: male; disease: Normal, diverticulitis; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                          GSM1616936

                                                                                                                                                                                                                                          Uncertain

                                                                                                                                                                                                                                          Normal colon biopsy acquired during surgery for colon cancer, female age 82 [RNA-Seq, 30_NIBD_NI]

                                                                                                                                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                          Requirements and decision evidence
                                                                                                                                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                • Normal colon biopsy acquired during surgery for colon cancer, female age 82 [RNA-Seq, 30_NIBD_NI] Colon age: 82; Sex: female; disease: Normal, Colon cancer; disease_stage: NA; i...
                                                                                                                                                                                                                                                • Normal colon biopsy acquired during surgery for colon cancer, female age 82 [RNA-Seq, 30_NIBD_NI] Colon age: 82; Sex: female; disease: Normal, Colon cancer; disease_stage: NA; i...
                                                                                                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                  • Normal colon biopsy acquired during surgery for colon cancer, female age 82 [RNA-Seq, 30_NIBD_NI] Colon age: 82; Sex: female; disease: Normal, Colon cancer; disease_stage: NA; i...
                                                                                                                                                                                                                                                  • Normal colon biopsy acquired during surgery for colon cancer, female age 82 [RNA-Seq, 30_NIBD_NI] Colon age: 82; Sex: female; disease: Normal, Colon cancer; disease_stage: NA; i...
                                                                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                                                                Source name
                                                                                                                                                                                                                                                Colon
                                                                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                                                                age: 82; Sex: female; disease: Normal, Colon cancer; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                Description
                                                                                                                                                                                                                                                Not reported
                                                                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                Source
                                                                                                                                                                                                                                                GEO
                                                                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                                                                sample_accession: GSM1616936
                                                                                                                                                                                                                                                sample_title: Normal colon biopsy acquired during surgery for colon cancer, female age 82 [RNA-Seq, 30_NIBD_NI]
                                                                                                                                                                                                                                                source_name: Colon
                                                                                                                                                                                                                                                characteristics: age: 82; Sex: female; disease: Normal, Colon cancer; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                GSM1616937

                                                                                                                                                                                                                                                Uncertain

                                                                                                                                                                                                                                                Normal colon acquired during surgery for colon cancer, male age 44 [RNA-Seq, 32_NIBD_NI]

                                                                                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                                                          Source metadata
                                                                                                                                                                                                                                                          Source name
                                                                                                                                                                                                                                                          Colon
                                                                                                                                                                                                                                                          Characteristics
                                                                                                                                                                                                                                                          age: 44; Sex: male; disease: Normal, Colon cancer; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                          Description
                                                                                                                                                                                                                                                          Not reported
                                                                                                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                          Source
                                                                                                                                                                                                                                                          GEO
                                                                                                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                                                                                                          sample_accession: GSM1616937
                                                                                                                                                                                                                                                          sample_title: Normal colon acquired during surgery for colon cancer, male age 44 [RNA-Seq, 32_NIBD_NI]
                                                                                                                                                                                                                                                          source_name: Colon
                                                                                                                                                                                                                                                          characteristics: age: 44; Sex: male; disease: Normal, Colon cancer; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                          GSM1616938

                                                                                                                                                                                                                                                          Uncertain

                                                                                                                                                                                                                                                          Normal colon acquired during surgery for colonic inertia, female age 41 [RNA-Seq, 36_NIBD_NI]

                                                                                                                                                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                                          Requirements and decision evidence
                                                                                                                                                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                  • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                    Source metadata
                                                                                                                                                                                                                                                                    Source name
                                                                                                                                                                                                                                                                    Colon
                                                                                                                                                                                                                                                                    Characteristics
                                                                                                                                                                                                                                                                    age: 41; Sex: female; disease: Normal, colonic inertia, TI submucosal hemorrhage (but looked inflamed on macro); disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                                    Description
                                                                                                                                                                                                                                                                    Not reported
                                                                                                                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                    Source
                                                                                                                                                                                                                                                                    GEO
                                                                                                                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                                                                                                                    sample_accession: GSM1616938
                                                                                                                                                                                                                                                                    sample_title: Normal colon acquired during surgery for colonic inertia, female age 41 [RNA-Seq, 36_NIBD_NI]
                                                                                                                                                                                                                                                                    source_name: Colon
                                                                                                                                                                                                                                                                    characteristics: age: 41; Sex: female; disease: Normal, colonic inertia, TI submucosal hemorrhage (but looked inflamed on macro); disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                                    GSM1616939

                                                                                                                                                                                                                                                                    Uncertain

                                                                                                                                                                                                                                                                    Normal colon acquired during surgery for colon cancer, male age 52 [RNA-Seq, 39_NIBD_NI]

                                                                                                                                                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                                                    Requirements and decision evidence
                                                                                                                                                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                            • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                              Source metadata
                                                                                                                                                                                                                                                                              Source name
                                                                                                                                                                                                                                                                              Colon
                                                                                                                                                                                                                                                                              Characteristics
                                                                                                                                                                                                                                                                              age: 52; Sex: male; disease: Normal, Colon cancer; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                                              Description
                                                                                                                                                                                                                                                                              Not reported
                                                                                                                                                                                                                                                                              Indexed organism evidence
                                                                                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                              Indexed assay evidence
                                                                                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                              Source
                                                                                                                                                                                                                                                                              GEO
                                                                                                                                                                                                                                                                              Original indexed metadata
                                                                                                                                                                                                                                                                              sample_accession: GSM1616939
                                                                                                                                                                                                                                                                              sample_title: Normal colon acquired during surgery for colon cancer, male age 52 [RNA-Seq, 39_NIBD_NI]
                                                                                                                                                                                                                                                                              source_name: Colon
                                                                                                                                                                                                                                                                              characteristics: age: 52; Sex: male; disease: Normal, Colon cancer; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                                              GSM1616940

                                                                                                                                                                                                                                                                              Uncertain

                                                                                                                                                                                                                                                                              Normal colon acquired during surgery for large polyp, male age 65 [RNA-Seq, 42_NIBD_NI]

                                                                                                                                                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                                                              Requirements and decision evidence
                                                                                                                                                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                        Source metadata
                                                                                                                                                                                                                                                                                        Source name
                                                                                                                                                                                                                                                                                        Colon
                                                                                                                                                                                                                                                                                        Characteristics
                                                                                                                                                                                                                                                                                        age: 65; Sex: male; disease: Normal control, large polyp; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                                                        Description
                                                                                                                                                                                                                                                                                        Not reported
                                                                                                                                                                                                                                                                                        Indexed organism evidence
                                                                                                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                        Indexed assay evidence
                                                                                                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                        Source
                                                                                                                                                                                                                                                                                        GEO
                                                                                                                                                                                                                                                                                        Original indexed metadata
                                                                                                                                                                                                                                                                                        sample_accession: GSM1616940
                                                                                                                                                                                                                                                                                        sample_title: Normal colon acquired during surgery for large polyp, male age 65 [RNA-Seq, 42_NIBD_NI]
                                                                                                                                                                                                                                                                                        source_name: Colon
                                                                                                                                                                                                                                                                                        characteristics: age: 65; Sex: male; disease: Normal control, large polyp; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                                                        GSM1616941

                                                                                                                                                                                                                                                                                        Uncertain

                                                                                                                                                                                                                                                                                        Normal colon acquired during surgery for colonic inertia, female age 45 [RNA-Seq, 43_NIBD_NI]

                                                                                                                                                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                                  Source metadata
                                                                                                                                                                                                                                                                                                  Source name
                                                                                                                                                                                                                                                                                                  Colon
                                                                                                                                                                                                                                                                                                  Characteristics
                                                                                                                                                                                                                                                                                                  age: 45; Sex: female; disease: Normal, colonic inertia; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                                                                  Description
                                                                                                                                                                                                                                                                                                  Not reported
                                                                                                                                                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                                  Source
                                                                                                                                                                                                                                                                                                  GEO
                                                                                                                                                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                                                                                                                                                  sample_accession: GSM1616941
                                                                                                                                                                                                                                                                                                  sample_title: Normal colon acquired during surgery for colonic inertia, female age 45 [RNA-Seq, 43_NIBD_NI]
                                                                                                                                                                                                                                                                                                  source_name: Colon
                                                                                                                                                                                                                                                                                                  characteristics: age: 45; Sex: female; disease: Normal, colonic inertia; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                                                                  GSM1616942

                                                                                                                                                                                                                                                                                                  Uncertain

                                                                                                                                                                                                                                                                                                  Normal colon acquired during surgery for adenoma, male age 70 [RNA-Seq, 48_NIBD_NI]

                                                                                                                                                                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                                            Source metadata
                                                                                                                                                                                                                                                                                                            Source name
                                                                                                                                                                                                                                                                                                            Colon
                                                                                                                                                                                                                                                                                                            Characteristics
                                                                                                                                                                                                                                                                                                            age: 70; Sex: male; disease: Normal, Adenoma; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                                                                            Description
                                                                                                                                                                                                                                                                                                            Not reported
                                                                                                                                                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                                            Source
                                                                                                                                                                                                                                                                                                            GEO
                                                                                                                                                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                                                                                                                                                            sample_accession: GSM1616942
                                                                                                                                                                                                                                                                                                            sample_title: Normal colon acquired during surgery for adenoma, male age 70 [RNA-Seq, 48_NIBD_NI]
                                                                                                                                                                                                                                                                                                            source_name: Colon
                                                                                                                                                                                                                                                                                                            characteristics: age: 70; Sex: male; disease: Normal, Adenoma; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                                                                            GSM1616943

                                                                                                                                                                                                                                                                                                            Uncertain

                                                                                                                                                                                                                                                                                                            Normal colon acquired during surgery for adenoma, male age 62 [RNA-Seq, 49_NIBD_NI]

                                                                                                                                                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                                                      Source metadata
                                                                                                                                                                                                                                                                                                                      Source name
                                                                                                                                                                                                                                                                                                                      Colon
                                                                                                                                                                                                                                                                                                                      Characteristics
                                                                                                                                                                                                                                                                                                                      age: 62; Sex: male; disease: Normal, Adenoma; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                                                                                      Description
                                                                                                                                                                                                                                                                                                                      Not reported
                                                                                                                                                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                                                      Source
                                                                                                                                                                                                                                                                                                                      GEO
                                                                                                                                                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                                                                                                                                                      sample_accession: GSM1616943
                                                                                                                                                                                                                                                                                                                      sample_title: Normal colon acquired during surgery for adenoma, male age 62 [RNA-Seq, 49_NIBD_NI]
                                                                                                                                                                                                                                                                                                                      source_name: Colon
                                                                                                                                                                                                                                                                                                                      characteristics: age: 62; Sex: male; disease: Normal, Adenoma; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                                                                                      GSM1616944

                                                                                                                                                                                                                                                                                                                      Uncertain

                                                                                                                                                                                                                                                                                                                      Normal colon acquired during surgery for small intestine neuroendocrine tumor, female age 49 [RNA-Seq, 50_NIBD_NI]

                                                                                                                                                                                                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Sample-local control marker detected.

                                                                                                                                                                                                                                                                                                                      Requirements and decision evidence
                                                                                                                                                                                                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                                                              • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                                                                                                                                                Source name
                                                                                                                                                                                                                                                                                                                                Colon
                                                                                                                                                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                                                                                                                                                age: 49; Sex: female; disease: Normal, SI Neuroendocrine tumor; disease_stage: NA; inflamed: No; montreal classification: NA
                                                                                                                                                                                                                                                                                                                                Description
                                                                                                                                                                                                                                                                                                                                Not reported
                                                                                                                                                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                                                                                Source
                                                                                                                                                                                                                                                                                                                                GEO
                                                                                                                                                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                                                                                                                                                sample_accession: GSM1616944
                                                                                                                                                                                                                                                                                                                                sample_title: Normal colon acquired during surgery for small intestine neuroendocrine tumor, female age 49 [RNA-Seq, 50_NIBD_NI]
                                                                                                                                                                                                                                                                                                                                source_name: Colon
                                                                                                                                                                                                                                                                                                                                characteristics: age: 49; Sex: female; disease: Normal, SI Neuroendocrine tumor; disease_stage: NA; inflamed: No; montreal classification: NA

                                                                                                                                                                                                                                                                                                                                Excluded samples (0)

                                                                                                                                                                                                                                                                                                                                No excluded samples.