Matching samples

GSE69762 · Gene expression of human small intestine generated by biopsy specimens

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

16 case / 0 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (30)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM1708491

Uncertain

nonIBD_jejunum_upper

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence
  • Case: organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • Case: assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • Case: specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • nonIBD_jejunum_upper biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum upper
        • nonIBD_jejunum_upper biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum upper
      • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • Case: specimen category excludes: Biofluid — Insufficient evidence
          • The required value is not reported.
          • nonIBD_jejunum_upper biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum upper
          • nonIBD_jejunum_upper biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum upper
        • Control: organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • Control: assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • Control: specimen category: Tissue or biopsy — Insufficient evidence
              • The required value is not reported.
              • nonIBD_jejunum_upper biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum upper
              • nonIBD_jejunum_upper biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum upper
            • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • Control: specimen category excludes: Biofluid — Insufficient evidence
                • The required value is not reported.
                • nonIBD_jejunum_upper biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum upper
                • nonIBD_jejunum_upper biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum upper
              Source metadata
              Source name
              biopsy specimen
              Characteristics
              disease state: nonIBD; tissue: nonIBD jejunum upper
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM1708491
sample_title: nonIBD_jejunum_upper
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD jejunum upper

              GSM1708492

              Uncertain

              nonIBD_jejunum_lower

              Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

              Requirements and decision evidence
              • Case: organism: Homo sapiens — Insufficient evidence
                • The required value is not reported.
                • Case: assay type: bulk RNA-seq — Insufficient evidence
                  • The required value is not reported.
                  • Case: specimen category: Tissue or biopsy — Insufficient evidence
                    • The required value is not reported.
                    • nonIBD_jejunum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum lower
                    • nonIBD_jejunum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum lower
                  • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • Case: specimen category excludes: Biofluid — Insufficient evidence
                      • The required value is not reported.
                      • nonIBD_jejunum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum lower
                      • nonIBD_jejunum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum lower
                    • Control: organism: Homo sapiens — Insufficient evidence
                      • The required value is not reported.
                      • Control: assay type: bulk RNA-seq — Insufficient evidence
                        • The required value is not reported.
                        • Control: specimen category: Tissue or biopsy — Insufficient evidence
                          • The required value is not reported.
                          • nonIBD_jejunum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum lower
                          • nonIBD_jejunum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum lower
                        • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                          • Supported by the indexed evidence.
                          • Control: specimen category excludes: Biofluid — Insufficient evidence
                            • The required value is not reported.
                            • nonIBD_jejunum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum lower
                            • nonIBD_jejunum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD jejunum lower
                          Source metadata
                          Source name
                          biopsy specimen
                          Characteristics
                          disease state: nonIBD; tissue: nonIBD jejunum lower
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM1708492
sample_title: nonIBD_jejunum_lower
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD jejunum lower

                          GSM1708493

                          Uncertain

                          nonIBD_ileum_lower

                          Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                          Requirements and decision evidence
                          • Case: organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • Case: assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                • The required value is not reported.
                                • nonIBD_ileum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD ileum lower
                                • nonIBD_ileum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD ileum lower
                              • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                • Supported by the indexed evidence.
                                • Case: specimen category excludes: Biofluid — Insufficient evidence
                                  • The required value is not reported.
                                  • nonIBD_ileum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD ileum lower
                                  • nonIBD_ileum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD ileum lower
                                • Control: organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • Control: assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • nonIBD_ileum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD ileum lower
                                      • nonIBD_ileum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD ileum lower
                                    • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                      • Supported by the indexed evidence.
                                      • Control: specimen category excludes: Biofluid — Insufficient evidence
                                        • The required value is not reported.
                                        • nonIBD_ileum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD ileum lower
                                        • nonIBD_ileum_lower biopsy specimen disease state: nonIBD; tissue: nonIBD ileum lower
                                      Source metadata
                                      Source name
                                      biopsy specimen
                                      Characteristics
                                      disease state: nonIBD; tissue: nonIBD ileum lower
                                      Description
                                      Not reported
                                      Indexed organism evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Indexed assay evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Source
                                      GEO
                                      Original indexed metadata
                                      sample_accession: GSM1708493
sample_title: nonIBD_ileum_lower
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD ileum lower

                                      GSM1708494

                                      Uncertain

                                      nonIBD_ascending colon

                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                      Requirements and decision evidence
                                      • Case: organism: Homo sapiens — Insufficient evidence
                                        • The required value is not reported.
                                        • Case: assay type: bulk RNA-seq — Insufficient evidence
                                          • The required value is not reported.
                                          • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                            • The required value is not reported.
                                            • nonIBD_ascending colon biopsy specimen disease state: nonIBD; tissue: nonIBD ascending colon
                                            • nonIBD_ascending colon biopsy specimen disease state: nonIBD; tissue: nonIBD ascending colon
                                          • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                            • Supported by the indexed evidence.
                                            • Case: specimen category excludes: Biofluid — Insufficient evidence
                                              • The required value is not reported.
                                              • nonIBD_ascending colon biopsy specimen disease state: nonIBD; tissue: nonIBD ascending colon
                                              • nonIBD_ascending colon biopsy specimen disease state: nonIBD; tissue: nonIBD ascending colon
                                            • Control: organism: Homo sapiens — Insufficient evidence
                                              • The required value is not reported.
                                              • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                • The required value is not reported.
                                                • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                  • The required value is not reported.
                                                  • nonIBD_ascending colon biopsy specimen disease state: nonIBD; tissue: nonIBD ascending colon
                                                  • nonIBD_ascending colon biopsy specimen disease state: nonIBD; tissue: nonIBD ascending colon
                                                • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                    • The required value is not reported.
                                                    • nonIBD_ascending colon biopsy specimen disease state: nonIBD; tissue: nonIBD ascending colon
                                                    • nonIBD_ascending colon biopsy specimen disease state: nonIBD; tissue: nonIBD ascending colon
                                                  Source metadata
                                                  Source name
                                                  biopsy specimen
                                                  Characteristics
                                                  disease state: nonIBD; tissue: nonIBD ascending colon
                                                  Description
                                                  Not reported
                                                  Indexed organism evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Indexed assay evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Source
                                                  GEO
                                                  Original indexed metadata
                                                  sample_accession: GSM1708494
sample_title: nonIBD_ascending colon
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD ascending colon

                                                  GSM1708495

                                                  Uncertain

                                                  IBD_jejunum_upper

                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                  Requirements and decision evidence
                                                  • organism: Homo sapiens — Insufficient evidence
                                                    • The required value is not reported.
                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                      • The required value is not reported.
                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                        • The required value is not reported.
                                                        • IBD_jejunum_upper biopsy specimen disease state: Crohn Disease; tissue: IBD jejunum upper
                                                        • IBD_jejunum_upper biopsy specimen disease state: Crohn Disease; tissue: IBD jejunum upper
                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                        • Supported by the indexed evidence.
                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                          • The required value is not reported.
                                                          • IBD_jejunum_upper biopsy specimen disease state: Crohn Disease; tissue: IBD jejunum upper
                                                          • IBD_jejunum_upper biopsy specimen disease state: Crohn Disease; tissue: IBD jejunum upper
                                                        Source metadata
                                                        Source name
                                                        biopsy specimen
                                                        Characteristics
                                                        disease state: Crohn Disease; tissue: IBD jejunum upper
                                                        Description
                                                        Not reported
                                                        Indexed organism evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Indexed assay evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Source
                                                        GEO
                                                        Original indexed metadata
                                                        sample_accession: GSM1708495
sample_title: IBD_jejunum_upper
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: IBD jejunum upper

                                                        GSM1708496

                                                        Uncertain

                                                        IBD_jejunum_lower

                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                        Requirements and decision evidence
                                                        • organism: Homo sapiens — Insufficient evidence
                                                          • The required value is not reported.
                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                            • The required value is not reported.
                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                              • The required value is not reported.
                                                              • IBD_jejunum_lower biopsy specimen disease state: Crohn Disease; tissue: IBD jejunum lower
                                                              • IBD_jejunum_lower biopsy specimen disease state: Crohn Disease; tissue: IBD jejunum lower
                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                • The required value is not reported.
                                                                • IBD_jejunum_lower biopsy specimen disease state: Crohn Disease; tissue: IBD jejunum lower
                                                                • IBD_jejunum_lower biopsy specimen disease state: Crohn Disease; tissue: IBD jejunum lower
                                                              Source metadata
                                                              Source name
                                                              biopsy specimen
                                                              Characteristics
                                                              disease state: Crohn Disease; tissue: IBD jejunum lower
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM1708496
sample_title: IBD_jejunum_lower
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: IBD jejunum lower

                                                              GSM1708497

                                                              Uncertain

                                                              IBD_ileum_upper

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • IBD_ileum_upper biopsy specimen disease state: Crohn Disease; tissue: IBD ileum upper
                                                                    • IBD_ileum_upper biopsy specimen disease state: Crohn Disease; tissue: IBD ileum upper
                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                    • Supported by the indexed evidence.
                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • IBD_ileum_upper biopsy specimen disease state: Crohn Disease; tissue: IBD ileum upper
                                                                      • IBD_ileum_upper biopsy specimen disease state: Crohn Disease; tissue: IBD ileum upper
                                                                    Source metadata
                                                                    Source name
                                                                    biopsy specimen
                                                                    Characteristics
                                                                    disease state: Crohn Disease; tissue: IBD ileum upper
                                                                    Description
                                                                    Not reported
                                                                    Indexed organism evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Indexed assay evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Source
                                                                    GEO
                                                                    Original indexed metadata
                                                                    sample_accession: GSM1708497
sample_title: IBD_ileum_upper
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: IBD ileum upper

                                                                    GSM1708498

                                                                    Uncertain

                                                                    IBD_ileum_middle

                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                    Requirements and decision evidence
                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                        • The required value is not reported.
                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • IBD_ileum_middle biopsy specimen disease state: Crohn Disease; tissue: IBD ileum middle
                                                                          • IBD_ileum_middle biopsy specimen disease state: Crohn Disease; tissue: IBD ileum middle
                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                          • Supported by the indexed evidence.
                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • IBD_ileum_middle biopsy specimen disease state: Crohn Disease; tissue: IBD ileum middle
                                                                            • IBD_ileum_middle biopsy specimen disease state: Crohn Disease; tissue: IBD ileum middle
                                                                          Source metadata
                                                                          Source name
                                                                          biopsy specimen
                                                                          Characteristics
                                                                          disease state: Crohn Disease; tissue: IBD ileum middle
                                                                          Description
                                                                          Not reported
                                                                          Indexed organism evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Indexed assay evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Source
                                                                          GEO
                                                                          Original indexed metadata
                                                                          sample_accession: GSM1708498
sample_title: IBD_ileum_middle
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: IBD ileum middle

                                                                          GSM1708499

                                                                          Uncertain

                                                                          IBD_ascending colon

                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                          Requirements and decision evidence
                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                • The required value is not reported.
                                                                                • IBD_ascending colon biopsy specimen disease state: Crohn Disease; tissue: IBD ascending colon
                                                                                • IBD_ascending colon biopsy specimen disease state: Crohn Disease; tissue: IBD ascending colon
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • IBD_ascending colon biopsy specimen disease state: Crohn Disease; tissue: IBD ascending colon
                                                                                  • IBD_ascending colon biopsy specimen disease state: Crohn Disease; tissue: IBD ascending colon
                                                                                Source metadata
                                                                                Source name
                                                                                biopsy specimen
                                                                                Characteristics
                                                                                disease state: Crohn Disease; tissue: IBD ascending colon
                                                                                Description
                                                                                Not reported
                                                                                Indexed organism evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Indexed assay evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Source
                                                                                GEO
                                                                                Original indexed metadata
                                                                                sample_accession: GSM1708499
sample_title: IBD_ascending colon
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: IBD ascending colon

                                                                                GSM1708500

                                                                                Uncertain

                                                                                No.6_nonIBD_Jejunum_Upper

                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                Requirements and decision evidence
                                                                                • Case: organism: Homo sapiens — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • No.6_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                      • No.6_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                    • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                      • Supported by the indexed evidence.
                                                                                      • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • No.6_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                        • No.6_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                      • Control: organism: Homo sapiens — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                          • The required value is not reported.
                                                                                          • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                            • The required value is not reported.
                                                                                            • No.6_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                            • No.6_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                          • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • No.6_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                              • No.6_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                            Source metadata
                                                                                            Source name
                                                                                            biopsy specimen
                                                                                            Characteristics
                                                                                            disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM1708500
sample_title: No.6_nonIBD_Jejunum_Upper
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Jejunum Upper

                                                                                            GSM1708501

                                                                                            Uncertain

                                                                                            No.6_nonIBD_Jejunum_Lower

                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • Case: organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • No.6_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                  • No.6_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                  • Supported by the indexed evidence.
                                                                                                  • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • No.6_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                    • No.6_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                  • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                      • The required value is not reported.
                                                                                                      • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • No.6_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                        • No.6_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                      • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                        • Supported by the indexed evidence.
                                                                                                        • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • No.6_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                          • No.6_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                        Source metadata
                                                                                                        Source name
                                                                                                        biopsy specimen
                                                                                                        Characteristics
                                                                                                        disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                        Description
                                                                                                        Not reported
                                                                                                        Indexed organism evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Indexed assay evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Source
                                                                                                        GEO
                                                                                                        Original indexed metadata
                                                                                                        sample_accession: GSM1708501
sample_title: No.6_nonIBD_Jejunum_Lower
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Jejunum Lower

                                                                                                        GSM1708502

                                                                                                        Uncertain

                                                                                                        No7_nonIBD_Jejunum_Upper

                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                        Requirements and decision evidence
                                                                                                        • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                              • The required value is not reported.
                                                                                                              • No7_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                              • No7_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                            • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • No7_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                • No7_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                              • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • No7_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                    • No7_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                  • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                    • Supported by the indexed evidence.
                                                                                                                    • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • No7_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                      • No7_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                    Source metadata
                                                                                                                    Source name
                                                                                                                    biopsy specimen
                                                                                                                    Characteristics
                                                                                                                    disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                    Description
                                                                                                                    Not reported
                                                                                                                    Indexed organism evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Indexed assay evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Source
                                                                                                                    GEO
                                                                                                                    Original indexed metadata
                                                                                                                    sample_accession: GSM1708502
sample_title: No7_nonIBD_Jejunum_Upper
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Jejunum Upper

                                                                                                                    GSM1708503

                                                                                                                    Uncertain

                                                                                                                    No7_nonIBD_Jejunum_Lower

                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                                    Requirements and decision evidence
                                                                                                                    • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                        • The required value is not reported.
                                                                                                                        • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                          • The required value is not reported.
                                                                                                                          • No7_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                          • No7_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                        • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • No7_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                            • No7_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                          • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                              • The required value is not reported.
                                                                                                                              • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                • The required value is not reported.
                                                                                                                                • No7_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                • No7_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                              • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                  • The required value is not reported.
                                                                                                                                  • No7_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                  • No7_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                Source metadata
                                                                                                                                Source name
                                                                                                                                biopsy specimen
                                                                                                                                Characteristics
                                                                                                                                disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                Description
                                                                                                                                Not reported
                                                                                                                                Indexed organism evidence
                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                Indexed assay evidence
                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                Source
                                                                                                                                GEO
                                                                                                                                Original indexed metadata
                                                                                                                                sample_accession: GSM1708503
sample_title: No7_nonIBD_Jejunum_Lower
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Jejunum Lower

                                                                                                                                GSM1708504

                                                                                                                                Uncertain

                                                                                                                                No.9_CD_Jejunum_Upper

                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                Requirements and decision evidence
                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                  • The required value is not reported.
                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                    • The required value is not reported.
                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                      • The required value is not reported.
                                                                                                                                      • No.9_CD_Jejunum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                      • No.9_CD_Jejunum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • No.9_CD_Jejunum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                        • No.9_CD_Jejunum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                      Source metadata
                                                                                                                                      Source name
                                                                                                                                      biopsy specimen
                                                                                                                                      Characteristics
                                                                                                                                      disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                      Description
                                                                                                                                      Not reported
                                                                                                                                      Indexed organism evidence
                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                      Indexed assay evidence
                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                      Source
                                                                                                                                      GEO
                                                                                                                                      Original indexed metadata
                                                                                                                                      sample_accession: GSM1708504
sample_title: No.9_CD_Jejunum_Upper
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Jejunum Upper

                                                                                                                                      GSM1708505

                                                                                                                                      Uncertain

                                                                                                                                      No.9_CD_Jejunum_Lower

                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                      Requirements and decision evidence
                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                          • The required value is not reported.
                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                            • The required value is not reported.
                                                                                                                                            • No.9_CD_Jejunum_Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                            • No.9_CD_Jejunum_Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                              • The required value is not reported.
                                                                                                                                              • No.9_CD_Jejunum_Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                              • No.9_CD_Jejunum_Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                            Source metadata
                                                                                                                                            Source name
                                                                                                                                            biopsy specimen
                                                                                                                                            Characteristics
                                                                                                                                            disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                            Description
                                                                                                                                            Not reported
                                                                                                                                            Indexed organism evidence
                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                            Indexed assay evidence
                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                            Source
                                                                                                                                            GEO
                                                                                                                                            Original indexed metadata
                                                                                                                                            sample_accession: GSM1708505
sample_title: No.9_CD_Jejunum_Lower
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Jejunum Lower

                                                                                                                                            GSM1708506

                                                                                                                                            Uncertain

                                                                                                                                            No.11_CD_Jejunum_Upper

                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                            Requirements and decision evidence
                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                              • The required value is not reported.
                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                • The required value is not reported.
                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                  • The required value is not reported.
                                                                                                                                                  • No.11_CD_Jejunum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                                  • No.11_CD_Jejunum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • No.11_CD_Jejunum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                                    • No.11_CD_Jejunum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                                  Source metadata
                                                                                                                                                  Source name
                                                                                                                                                  biopsy specimen
                                                                                                                                                  Characteristics
                                                                                                                                                  disease state: Crohn Disease; tissue: CD Jejunum Upper
                                                                                                                                                  Description
                                                                                                                                                  Not reported
                                                                                                                                                  Indexed organism evidence
                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                  Indexed assay evidence
                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                  Source
                                                                                                                                                  GEO
                                                                                                                                                  Original indexed metadata
                                                                                                                                                  sample_accession: GSM1708506
sample_title: No.11_CD_Jejunum_Upper
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Jejunum Upper

                                                                                                                                                  GSM1708507

                                                                                                                                                  Uncertain

                                                                                                                                                  No.11_CD_Jejunum_Lower

                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                      • The required value is not reported.
                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                        • The required value is not reported.
                                                                                                                                                        • No.11_CD_Jejunum_Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                        • No.11_CD_Jejunum_Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • No.11_CD_Jejunum_Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                          • No.11_CD_Jejunum_Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                        Source metadata
                                                                                                                                                        Source name
                                                                                                                                                        biopsy specimen
                                                                                                                                                        Characteristics
                                                                                                                                                        disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                        Description
                                                                                                                                                        Not reported
                                                                                                                                                        Indexed organism evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Indexed assay evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Source
                                                                                                                                                        GEO
                                                                                                                                                        Original indexed metadata
                                                                                                                                                        sample_accession: GSM1708507
sample_title: No.11_CD_Jejunum_Lower
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Jejunum Lower

                                                                                                                                                        GSM1708508

                                                                                                                                                        Uncertain

                                                                                                                                                        No.9_nonIBD_Jejunum_Upper

                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                        • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                            • The required value is not reported.
                                                                                                                                                            • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                              • The required value is not reported.
                                                                                                                                                              • No.9_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                              • No.9_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                            • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                              • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                • No.9_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                                • No.9_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                              • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                  • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                    • No.9_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                                    • No.9_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                                  • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                    • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • No.9_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                                      • No.9_nonIBD_Jejunum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                                    Source metadata
                                                                                                                                                                    Source name
                                                                                                                                                                    biopsy specimen
                                                                                                                                                                    Characteristics
                                                                                                                                                                    disease state: nonIBD; tissue: nonIBD Jejunum Upper
                                                                                                                                                                    Description
                                                                                                                                                                    Not reported
                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                    Source
                                                                                                                                                                    GEO
                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                    sample_accession: GSM1708508
sample_title: No.9_nonIBD_Jejunum_Upper
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Jejunum Upper

                                                                                                                                                                    GSM1708509

                                                                                                                                                                    Uncertain

                                                                                                                                                                    No.9_nonIBD_Jejunum_Middle

                                                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                                                                                    Requirements and decision evidence
                                                                                                                                                                    • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                        • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                          • No.9_nonIBD_Jejunum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                          • No.9_nonIBD_Jejunum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                        • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                          • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                            • No.9_nonIBD_Jejunum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                            • No.9_nonIBD_Jejunum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                          • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                            • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                              • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                • No.9_nonIBD_Jejunum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                                • No.9_nonIBD_Jejunum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                              • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • No.9_nonIBD_Jejunum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                                  • No.9_nonIBD_Jejunum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                                Source metadata
                                                                                                                                                                                Source name
                                                                                                                                                                                biopsy specimen
                                                                                                                                                                                Characteristics
                                                                                                                                                                                disease state: nonIBD; tissue: nonIBD Jejunum Middle
                                                                                                                                                                                Description
                                                                                                                                                                                Not reported
                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                Source
                                                                                                                                                                                GEO
                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                sample_accession: GSM1708509
sample_title: No.9_nonIBD_Jejunum_Middle
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Jejunum Middle

                                                                                                                                                                                GSM1708510

                                                                                                                                                                                Uncertain

                                                                                                                                                                                No.9_nonIBD_Jejunum_Lower

                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                    • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                      • No.9_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                      • No.9_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                    • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                      • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                        • No.9_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                        • No.9_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                      • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                        • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                          • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                            • No.9_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                            • No.9_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                          • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                            • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                              • No.9_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                              • No.9_nonIBD_Jejunum_Lower biopsy specimen disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                            Source metadata
                                                                                                                                                                                            Source name
                                                                                                                                                                                            biopsy specimen
                                                                                                                                                                                            Characteristics
                                                                                                                                                                                            disease state: nonIBD; tissue: nonIBD Jejunum Lower
                                                                                                                                                                                            Description
                                                                                                                                                                                            Not reported
                                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                            Source
                                                                                                                                                                                            GEO
                                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                                            sample_accession: GSM1708510
sample_title: No.9_nonIBD_Jejunum_Lower
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Jejunum Lower

                                                                                                                                                                                            GSM1708511

                                                                                                                                                                                            Uncertain

                                                                                                                                                                                            No.9_nonIBD_Ileum_Upper

                                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                                            • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                              • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                  • No.9_nonIBD_Ileum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                  • No.9_nonIBD_Ileum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                  • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                    • No.9_nonIBD_Ileum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                    • No.9_nonIBD_Ileum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                  • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                    • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                      • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                        • No.9_nonIBD_Ileum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                        • No.9_nonIBD_Ileum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                      • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                        • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                          • No.9_nonIBD_Ileum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                          • No.9_nonIBD_Ileum_Upper biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                        Source metadata
                                                                                                                                                                                                        Source name
                                                                                                                                                                                                        biopsy specimen
                                                                                                                                                                                                        Characteristics
                                                                                                                                                                                                        disease state: nonIBD; tissue: nonIBD Ileum Upper
                                                                                                                                                                                                        Description
                                                                                                                                                                                                        Not reported
                                                                                                                                                                                                        Indexed organism evidence
                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                        Indexed assay evidence
                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                        Source
                                                                                                                                                                                                        GEO
                                                                                                                                                                                                        Original indexed metadata
                                                                                                                                                                                                        sample_accession: GSM1708511
sample_title: No.9_nonIBD_Ileum_Upper
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Ileum Upper

                                                                                                                                                                                                        GSM1708512

                                                                                                                                                                                                        Uncertain

                                                                                                                                                                                                        No.9_nonIBD_Ileum_Middle

                                                                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                                                                        • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                          • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                            • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                              • No.9_nonIBD_Ileum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                              • No.9_nonIBD_Ileum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                            • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                                              • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                • No.9_nonIBD_Ileum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                                • No.9_nonIBD_Ileum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                              • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                  • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                    • No.9_nonIBD_Ileum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                                    • No.9_nonIBD_Ileum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                                  • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                    • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                      • No.9_nonIBD_Ileum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                                      • No.9_nonIBD_Ileum_Middle biopsy specimen disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                                    Source metadata
                                                                                                                                                                                                                    Source name
                                                                                                                                                                                                                    biopsy specimen
                                                                                                                                                                                                                    Characteristics
                                                                                                                                                                                                                    disease state: nonIBD; tissue: nonIBD Ileum Middle
                                                                                                                                                                                                                    Description
                                                                                                                                                                                                                    Not reported
                                                                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                    Source
                                                                                                                                                                                                                    GEO
                                                                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                                                                    sample_accession: GSM1708512
sample_title: No.9_nonIBD_Ileum_Middle
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD Ileum Middle

                                                                                                                                                                                                                    GSM1708513

                                                                                                                                                                                                                    Uncertain

                                                                                                                                                                                                                    No.9_nonIBD_colon

                                                                                                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                                                                                                                                    Requirements and decision evidence
                                                                                                                                                                                                                    • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                      • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                        • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                          • No.9_nonIBD_colon biopsy specimen disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                          • No.9_nonIBD_colon biopsy specimen disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                        • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                          • Case: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                            • No.9_nonIBD_colon biopsy specimen disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                            • No.9_nonIBD_colon biopsy specimen disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                          • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                            • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                              • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                • No.9_nonIBD_colon biopsy specimen disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                                • No.9_nonIBD_colon biopsy specimen disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                              • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                                • Control: specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                  • No.9_nonIBD_colon biopsy specimen disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                                  • No.9_nonIBD_colon biopsy specimen disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                                                Source name
                                                                                                                                                                                                                                biopsy specimen
                                                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                                                disease state: nonIBD; tissue: nonIBD colon
                                                                                                                                                                                                                                Description
                                                                                                                                                                                                                                Not reported
                                                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                Source
                                                                                                                                                                                                                                GEO
                                                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                                                sample_accession: GSM1708513
sample_title: No.9_nonIBD_colon
source_name: biopsy specimen
characteristics: disease state: nonIBD; tissue: nonIBD colon

                                                                                                                                                                                                                                GSM1708514

                                                                                                                                                                                                                                Uncertain

                                                                                                                                                                                                                                No.12_CD_Jejunum_Upper_np

                                                                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                      • No.12_CD_Jejunum_Upper_np biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper np
                                                                                                                                                                                                                                      • No.12_CD_Jejunum_Upper_np biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper np
                                                                                                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                        • No.12_CD_Jejunum_Upper_np biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper np
                                                                                                                                                                                                                                        • No.12_CD_Jejunum_Upper_np biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper np
                                                                                                                                                                                                                                      Source metadata
                                                                                                                                                                                                                                      Source name
                                                                                                                                                                                                                                      biopsy specimen
                                                                                                                                                                                                                                      Characteristics
                                                                                                                                                                                                                                      disease state: Crohn Disease; tissue: CD Jejunum Upper np
                                                                                                                                                                                                                                      Description
                                                                                                                                                                                                                                      Not reported
                                                                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                      Source
                                                                                                                                                                                                                                      GEO
                                                                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                                                                      sample_accession: GSM1708514
sample_title: No.12_CD_Jejunum_Upper_np
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Jejunum Upper np

                                                                                                                                                                                                                                      GSM1708515

                                                                                                                                                                                                                                      Uncertain

                                                                                                                                                                                                                                      No.12_CD_Jejunum_Upper_ulcer

                                                                                                                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                      Requirements and decision evidence
                                                                                                                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                            • No.12_CD_Jejunum_Upper_ulcer biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper ulcer
                                                                                                                                                                                                                                            • No.12_CD_Jejunum_Upper_ulcer biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper ulcer
                                                                                                                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                              • No.12_CD_Jejunum_Upper_ulcer biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper ulcer
                                                                                                                                                                                                                                              • No.12_CD_Jejunum_Upper_ulcer biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Upper ulcer
                                                                                                                                                                                                                                            Source metadata
                                                                                                                                                                                                                                            Source name
                                                                                                                                                                                                                                            biopsy specimen
                                                                                                                                                                                                                                            Characteristics
                                                                                                                                                                                                                                            disease state: Crohn Disease; tissue: CD Jejunum Upper ulcer
                                                                                                                                                                                                                                            Description
                                                                                                                                                                                                                                            Not reported
                                                                                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                            Source
                                                                                                                                                                                                                                            GEO
                                                                                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                                                                                            sample_accession: GSM1708515
sample_title: No.12_CD_Jejunum_Upper_ulcer
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Jejunum Upper ulcer

                                                                                                                                                                                                                                            GSM1708516

                                                                                                                                                                                                                                            Uncertain

                                                                                                                                                                                                                                            No.12_CD_Jejunum_Middle

                                                                                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                  • No.12_CD_Jejunum_Middle biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Middle
                                                                                                                                                                                                                                                  • No.12_CD_Jejunum_Middle biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Middle
                                                                                                                                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                    • No.12_CD_Jejunum_Middle biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Middle
                                                                                                                                                                                                                                                    • No.12_CD_Jejunum_Middle biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Middle
                                                                                                                                                                                                                                                  Source metadata
                                                                                                                                                                                                                                                  Source name
                                                                                                                                                                                                                                                  biopsy specimen
                                                                                                                                                                                                                                                  Characteristics
                                                                                                                                                                                                                                                  disease state: Crohn Disease; tissue: CD Jejunum Middle
                                                                                                                                                                                                                                                  Description
                                                                                                                                                                                                                                                  Not reported
                                                                                                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                  Source
                                                                                                                                                                                                                                                  GEO
                                                                                                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                                                                                                  sample_accession: GSM1708516
sample_title: No.12_CD_Jejunum_Middle
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Jejunum Middle

                                                                                                                                                                                                                                                  GSM1708517

                                                                                                                                                                                                                                                  Uncertain

                                                                                                                                                                                                                                                  No.12_CD_Jejunum_ Lower

                                                                                                                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                                        • No.12_CD_Jejunum_ Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                                                                                                                        • No.12_CD_Jejunum_ Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                                          • No.12_CD_Jejunum_ Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                                                                                                                          • No.12_CD_Jejunum_ Lower biopsy specimen disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                                                                                                                        Source metadata
                                                                                                                                                                                                                                                        Source name
                                                                                                                                                                                                                                                        biopsy specimen
                                                                                                                                                                                                                                                        Characteristics
                                                                                                                                                                                                                                                        disease state: Crohn Disease; tissue: CD Jejunum Lower
                                                                                                                                                                                                                                                        Description
                                                                                                                                                                                                                                                        Not reported
                                                                                                                                                                                                                                                        Indexed organism evidence
                                                                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                        Indexed assay evidence
                                                                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                        Source
                                                                                                                                                                                                                                                        GEO
                                                                                                                                                                                                                                                        Original indexed metadata
                                                                                                                                                                                                                                                        sample_accession: GSM1708517
sample_title: No.12_CD_Jejunum_ Lower
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Jejunum  Lower

                                                                                                                                                                                                                                                        GSM1708518

                                                                                                                                                                                                                                                        Uncertain

                                                                                                                                                                                                                                                        No.12_CD_Ileum_Upper

                                                                                                                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                                              • No.12_CD_Ileum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Ileum Upper
                                                                                                                                                                                                                                                              • No.12_CD_Ileum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Ileum Upper
                                                                                                                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                                                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                                • No.12_CD_Ileum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Ileum Upper
                                                                                                                                                                                                                                                                • No.12_CD_Ileum_Upper biopsy specimen disease state: Crohn Disease; tissue: CD Ileum Upper
                                                                                                                                                                                                                                                              Source metadata
                                                                                                                                                                                                                                                              Source name
                                                                                                                                                                                                                                                              biopsy specimen
                                                                                                                                                                                                                                                              Characteristics
                                                                                                                                                                                                                                                              disease state: Crohn Disease; tissue: CD Ileum Upper
                                                                                                                                                                                                                                                              Description
                                                                                                                                                                                                                                                              Not reported
                                                                                                                                                                                                                                                              Indexed organism evidence
                                                                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                              Indexed assay evidence
                                                                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                              Source
                                                                                                                                                                                                                                                              GEO
                                                                                                                                                                                                                                                              Original indexed metadata
                                                                                                                                                                                                                                                              sample_accession: GSM1708518
sample_title: No.12_CD_Ileum_Upper
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Ileum Upper

                                                                                                                                                                                                                                                              GSM1708519

                                                                                                                                                                                                                                                              Uncertain

                                                                                                                                                                                                                                                              No.12_CD_Ileum_ Lower

                                                                                                                                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                              Requirements and decision evidence
                                                                                                                                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                                    • No.12_CD_Ileum_ Lower biopsy specimen disease state: Crohn Disease; tissue: CD Ileum Lower
                                                                                                                                                                                                                                                                    • No.12_CD_Ileum_ Lower biopsy specimen disease state: Crohn Disease; tissue: CD Ileum Lower
                                                                                                                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                                      • No.12_CD_Ileum_ Lower biopsy specimen disease state: Crohn Disease; tissue: CD Ileum Lower
                                                                                                                                                                                                                                                                      • No.12_CD_Ileum_ Lower biopsy specimen disease state: Crohn Disease; tissue: CD Ileum Lower
                                                                                                                                                                                                                                                                    Source metadata
                                                                                                                                                                                                                                                                    Source name
                                                                                                                                                                                                                                                                    biopsy specimen
                                                                                                                                                                                                                                                                    Characteristics
                                                                                                                                                                                                                                                                    disease state: Crohn Disease; tissue: CD Ileum Lower
                                                                                                                                                                                                                                                                    Description
                                                                                                                                                                                                                                                                    Not reported
                                                                                                                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                    Source
                                                                                                                                                                                                                                                                    GEO
                                                                                                                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                                                                                                                    sample_accession: GSM1708519
sample_title: No.12_CD_Ileum_ Lower
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD Ileum  Lower

                                                                                                                                                                                                                                                                    GSM1708520

                                                                                                                                                                                                                                                                    Uncertain

                                                                                                                                                                                                                                                                    No.12_CD_colon

                                                                                                                                                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                                    Requirements and decision evidence
                                                                                                                                                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                                                          • No.12_CD_colon biopsy specimen disease state: Crohn Disease; tissue: CD colon
                                                                                                                                                                                                                                                                          • No.12_CD_colon biopsy specimen disease state: Crohn Disease; tissue: CD colon
                                                                                                                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                                                            • No.12_CD_colon biopsy specimen disease state: Crohn Disease; tissue: CD colon
                                                                                                                                                                                                                                                                            • No.12_CD_colon biopsy specimen disease state: Crohn Disease; tissue: CD colon
                                                                                                                                                                                                                                                                          Source metadata
                                                                                                                                                                                                                                                                          Source name
                                                                                                                                                                                                                                                                          biopsy specimen
                                                                                                                                                                                                                                                                          Characteristics
                                                                                                                                                                                                                                                                          disease state: Crohn Disease; tissue: CD colon
                                                                                                                                                                                                                                                                          Description
                                                                                                                                                                                                                                                                          Not reported
                                                                                                                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                          Source
                                                                                                                                                                                                                                                                          GEO
                                                                                                                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                                                                                                                          sample_accession: GSM1708520
sample_title: No.12_CD_colon
source_name: biopsy specimen
characteristics: disease state: Crohn Disease; tissue: CD colon

                                                                                                                                                                                                                                                                          Excluded samples (0)

                                                                                                                                                                                                                                                                          No excluded samples.