GSE72221 matching samples

GSM1857992

Uncertain

INF156_10661_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- INF156_10661_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
- INF156_10661_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- INF156_10661_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
- INF156_10661_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF

Source metadata

Source name: Biopsy
Characteristics: diagnosis: infectious colitis; activity: normal; group: INF
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1857992
sample_title: INF156_10661_2
source_name: Biopsy
characteristics: diagnosis: infectious colitis; activity: normal; group: INF

GSM1857993

Uncertain

INF157_10754_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- INF157_10754_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
- INF157_10754_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- INF157_10754_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
- INF157_10754_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF

Source metadata

Source name: Biopsy
Characteristics: diagnosis: infectious colitis; activity: normal; group: INF
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1857993
sample_title: INF157_10754_2
source_name: Biopsy
characteristics: diagnosis: infectious colitis; activity: normal; group: INF

GSM1857994

Uncertain

INF246_10800_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- INF246_10800_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
- INF246_10800_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- INF246_10800_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF
- INF246_10800_2 Biopsy diagnosis: infectious colitis; activity: normal; group: INF

Source metadata

Source name: Biopsy
Characteristics: diagnosis: infectious colitis; activity: normal; group: INF
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1857994
sample_title: INF246_10800_2
source_name: Biopsy
characteristics: diagnosis: infectious colitis; activity: normal; group: INF

GSM1857995

Uncertain

N104_110710_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N104_110710_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N104_110710_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N104_110710_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N104_110710_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1857995
sample_title: N104_110710_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1857996

Uncertain

N122_0649_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N122_0649_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N122_0649_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N122_0649_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N122_0649_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1857996
sample_title: N122_0649_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1857997

Uncertain

N188_10701_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N188_10701_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N188_10701_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N188_10701_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N188_10701_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1857997
sample_title: N188_10701_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1857998

Uncertain

N190_10699_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N190_10699_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N190_10699_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N190_10699_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N190_10699_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1857998
sample_title: N190_10699_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1857999

Uncertain

N195_10697_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N195_10697_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N195_10697_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N195_10697_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N195_10697_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1857999
sample_title: N195_10697_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858000

Uncertain

N199_10755_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N199_10755_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N199_10755_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N199_10755_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N199_10755_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858000
sample_title: N199_10755_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858001

Uncertain

N209_10753_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N209_10753_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N209_10753_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N209_10753_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N209_10753_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858001
sample_title: N209_10753_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858002

Uncertain

N210_10751_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N210_10751_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N210_10751_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N210_10751_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N210_10751_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858002
sample_title: N210_10751_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858003

Uncertain

N212_10801_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N212_10801_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N212_10801_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N212_10801_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N212_10801_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858003
sample_title: N212_10801_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858004

Uncertain

N226_10803_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N226_10803_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N226_10803_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N226_10803_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N226_10803_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858004
sample_title: N226_10803_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858005

Uncertain

N234_10758_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N234_10758_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N234_10758_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N234_10758_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N234_10758_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858005
sample_title: N234_10758_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858006

Uncertain

N239_10757_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N239_10757_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N239_10757_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N239_10757_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N239_10757_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858006
sample_title: N239_10757_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858007

Uncertain

N66_0640_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N66_0640_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N66_0640_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N66_0640_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N66_0640_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858007
sample_title: N66_0640_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858008

Uncertain

N94_110711_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- N94_110711_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N94_110711_1 Biopsy diagnosis: normal; activity: normal; group: CTR
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- N94_110711_1 Biopsy diagnosis: normal; activity: normal; group: CTR
- N94_110711_1 Biopsy diagnosis: normal; activity: normal; group: CTR

Source metadata

Source name: Biopsy
Characteristics: diagnosis: normal; activity: normal; group: CTR
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858008
sample_title: N94_110711_1
source_name: Biopsy
characteristics: diagnosis: normal; activity: normal; group: CTR

GSM1858009

Uncertain

UC100ina_10698_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC100ina_10698_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC100ina_10698_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC100ina_10698_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC100ina_10698_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858009
sample_title: UC100ina_10698_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858010

Uncertain

UC105ina_10661_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC105ina_10661_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC105ina_10661_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC105ina_10661_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC105ina_10661_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858010
sample_title: UC105ina_10661_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858011

Uncertain

UC109ina_10754_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC109ina_10754_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC109ina_10754_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC109ina_10754_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC109ina_10754_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858011
sample_title: UC109ina_10754_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858012

Uncertain

UC118ina_10752_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC118ina_10752_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC118ina_10752_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC118ina_10752_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC118ina_10752_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858012
sample_title: UC118ina_10752_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858013

Uncertain

UC121ina_10802_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC121ina_10802_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC121ina_10802_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC121ina_10802_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC121ina_10802_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858013
sample_title: UC121ina_10802_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858014

Uncertain

UC127ina_10750_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC127ina_10750_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC127ina_10750_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC127ina_10750_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC127ina_10750_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858014
sample_title: UC127ina_10750_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858015

Uncertain

UC130ina_10800_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC130ina_10800_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC130ina_10800_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC130ina_10800_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC130ina_10800_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858015
sample_title: UC130ina_10800_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858016

Uncertain

UC159ina_10756_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC159ina_10756_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC159ina_10756_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC159ina_10756_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC159ina_10756_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858016
sample_title: UC159ina_10756_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858017

Uncertain

UC165ina_0649_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC165ina_0649_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC165ina_0649_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC165ina_0649_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC165ina_0649_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858017
sample_title: UC165ina_0649_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858018

Uncertain

UC167act_10756_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC167act_10756_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC167act_10756_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC167act_10756_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC167act_10756_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858018
sample_title: UC167act_10756_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858019

Uncertain

UC183ina_10757_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC183ina_10757_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC183ina_10757_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC183ina_10757_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC183ina_10757_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858019
sample_title: UC183ina_10757_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858020

Uncertain

UC70ina_110708_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC70ina_110708_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC70ina_110708_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC70ina_110708_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC70ina_110708_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858020
sample_title: UC70ina_110708_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858021

Uncertain

UC87ina_110707_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC87ina_110707_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC87ina_110707_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC87ina_110707_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC87ina_110707_2 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858021
sample_title: UC87ina_110707_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858022

Uncertain

UC90ina_110727_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC90ina_110727_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC90ina_110727_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC90ina_110727_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC90ina_110727_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858022
sample_title: UC90ina_110727_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858023

Uncertain

UC93ina_10700_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC93ina_10700_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC93ina_10700_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC93ina_10700_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC
- UC93ina_10700_1 Biopsy diagnosis: Ulcerative colitis; activity: inactive; group: iUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858023
sample_title: UC93ina_10700_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: inactive; group: iUC

GSM1858024

Uncertain

UC110act_10701_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC110act_10701_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC110act_10701_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC110act_10701_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC110act_10701_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858024
sample_title: UC110act_10701_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858025

Uncertain

UC139act_10697_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC139act_10697_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC139act_10697_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC139act_10697_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC139act_10697_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858025
sample_title: UC139act_10697_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858026

Uncertain

UC143act_10755_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC143act_10755_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC143act_10755_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC143act_10755_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC143act_10755_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858026
sample_title: UC143act_10755_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858027

Uncertain

UC144act_10758_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC144act_10758_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC144act_10758_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC144act_10758_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC144act_10758_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858027
sample_title: UC144act_10758_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858028

Uncertain

UC148act_10752_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC148act_10752_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC148act_10752_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC148act_10752_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC148act_10752_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858028
sample_title: UC148act_10752_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858029

Uncertain

UC153act_10751_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC153act_10751_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC153act_10751_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC153act_10751_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC153act_10751_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858029
sample_title: UC153act_10751_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858030

Uncertain

UC161act_10803_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC161act_10803_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC161act_10803_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC161act_10803_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC161act_10803_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858030
sample_title: UC161act_10803_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858031

Uncertain

UC168act_10801_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC168act_10801_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC168act_10801_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC168act_10801_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC168act_10801_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858031
sample_title: UC168act_10801_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858032

Uncertain

UC169act_10753_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC169act_10753_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC169act_10753_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC169act_10753_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC169act_10753_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858032
sample_title: UC169act_10753_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858033

Uncertain

UC178act_10769_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC178act_10769_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC178act_10769_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC178act_10769_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC178act_10769_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858033
sample_title: UC178act_10769_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858034

Uncertain

UC63act_0640_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC63act_0640_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC63act_0640_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC63act_0640_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC63act_0640_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858034
sample_title: UC63act_0640_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858035

Uncertain

UC71act_110711_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC71act_110711_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC71act_110711_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC71act_110711_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC71act_110711_2 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858035
sample_title: UC71act_110711_2
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858036

Uncertain

UC73act2_10772_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC73act2_10772_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC73act2_10772_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC73act2_10772_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC73act2_10772_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858036
sample_title: UC73act2_10772_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858037

Uncertain

UC74act_110708_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC74act_110708_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC74act_110708_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC74act_110708_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC
- UC74act_110708_1 Biopsy diagnosis: Ulcerative colitis; activity: active; group: aUC

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858037
sample_title: UC74act_110708_1
source_name: Biopsy
characteristics: diagnosis: Ulcerative colitis; activity: active; group: aUC

GSM1858038

Uncertain

CD111act_10698_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD111act_10698_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD111act_10698_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD111act_10698_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD111act_10698_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858038
sample_title: CD111act_10698_2
source_name: Biopsy
characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD

GSM1858039

Uncertain

CD131act_10750_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD131act_10750_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD131act_10750_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD131act_10750_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD131act_10750_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858039
sample_title: CD131act_10750_2
source_name: Biopsy
characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD

GSM1858040

Uncertain

CD150act_10802_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD150act_10802_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD150act_10802_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD150act_10802_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD150act_10802_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858040
sample_title: CD150act_10802_2
source_name: Biopsy
characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD

GSM1858041

Uncertain

CD33act_110707_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD33act_110707_1 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD33act_110707_1 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD33act_110707_1 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD33act_110707_1 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858041
sample_title: CD33act_110707_1
source_name: Biopsy
characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD

GSM1858042

Uncertain

CD84act2_10772_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD84act2_10772_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD84act2_10772_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD84act2_10772_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD
- CD84act2_10772_2 Biopsy diagnosis: Crohn’s disease; activity: active; group: aCD

Source metadata

Source name: Biopsy
Characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858042
sample_title: CD84act2_10772_2
source_name: Biopsy
characteristics: diagnosis: Crohn’s disease; activity: active; group: aCD

GSM1858043

Uncertain

IBS108_10771_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IBS108_10771_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS108_10771_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IBS108_10771_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS108_10771_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS

Source metadata

Source name: Biopsy
Characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858043
sample_title: IBS108_10771_2
source_name: Biopsy
characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS

GSM1858044

Uncertain

IBS184e_10769_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IBS184e_10769_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS184e_10769_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IBS184e_10769_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS184e_10769_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS

Source metadata

Source name: Biopsy
Characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858044
sample_title: IBS184e_10769_2
source_name: Biopsy
characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS

GSM1858045

Uncertain

IBS189_10770H_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IBS189_10770H_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS189_10770H_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IBS189_10770H_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS189_10770H_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS

Source metadata

Source name: Biopsy
Characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858045
sample_title: IBS189_10770H_2
source_name: Biopsy
characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS

GSM1858046

Uncertain

IBS96_110727_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IBS96_110727_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS96_110727_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IBS96_110727_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS96_110727_2 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS

Source metadata

Source name: Biopsy
Characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858046
sample_title: IBS96_110727_2
source_name: Biopsy
characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS

GSM1858047

Uncertain

IBS99_10771_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- IBS99_10771_1 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS99_10771_1 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- IBS99_10771_1 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS
- IBS99_10771_1 Biopsy diagnosis: irritable bowel syndrome; activity: normal; group: IBS

Source metadata

Source name: Biopsy
Characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858047
sample_title: IBS99_10771_1
source_name: Biopsy
characteristics: diagnosis: irritable bowel syndrome; activity: normal; group: IBS

GSM1858048

Uncertain

INF255_10749_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Case: specimen category excludes: Biofluid — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Control: specimen category excludes: Biofluid — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence

Case: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Case: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Case: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- INF255_10749_1 Biopsy diagnosis: infectious colitis; activity: active; group: INF
- INF255_10749_1 Biopsy diagnosis: infectious colitis; activity: active; group: INF
Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Case: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- INF255_10749_1 Biopsy diagnosis: infectious colitis; activity: active; group: INF
- INF255_10749_1 Biopsy diagnosis: infectious colitis; activity: active; group: INF
Control: organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
Control: assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
Control: specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- INF255_10749_1 Biopsy diagnosis: infectious colitis; activity: active; group: INF
- INF255_10749_1 Biopsy diagnosis: infectious colitis; activity: active; group: INF
Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
Control: specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- INF255_10749_1 Biopsy diagnosis: infectious colitis; activity: active; group: INF
- INF255_10749_1 Biopsy diagnosis: infectious colitis; activity: active; group: INF

Source metadata

Source name: Biopsy
Characteristics: diagnosis: infectious colitis; activity: active; group: INF
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1858048
sample_title: INF255_10749_1
source_name: Biopsy
characteristics: diagnosis: infectious colitis; activity: active; group: INF

Included samples (0)

Uncertain samples (57)

Excluded samples (0)