GSE74265

Gene expression signature and mitochondrial DNA copy number variation in ulcerative colitis patients

Whole-study status Not suitable

Dataset does not meet the current suitability threshold.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

View matching samples

30 case / 0 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: microarray
Organism: Homo sapiens
Whole-study samples: 30 samples
Specimen: Tissue
Reported/interpreted study design: Unclear study design Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Watanabe T, Kobunai T, Sakamoto E, Hashimoto E
Contact name: Toshiaki Watanabe
Submission date: 2015-10-22
Last update: 2019-03-25
Organization: University of Tokyo
Department: Department of Surgical Oncology
Public date: 2017-07-12
Experiment types: Expression profiling by array
Platforms: GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Series type: Series
SubSeries: Not available
BioProject: PRJNA299614

Summary

Specimens were obtained from non-neoplastic colorectal mucosa for RNA ayalysis. Samples were obtained either from surgically resected specimens or during surveillance coloscopy. The expression profiles were determined using Affymetrix Human Genome U133 Plus 2.0 arrays.The correlation between mtDNA CNV and mitochondria-related gene expressions were investigated.

Overall design

Thirty patients who underwent surgical resection or surveillance coloscopy were included in this study. The copy number of mitochondria DNA was measured by absolute quantification using QuantStudio SD digital PCR system. Samples were classified into mtDNA-Low and mtDNA-High at the median.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 30 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Planned source for curated expression experiment links.	No match found
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 2 linked publications 2 DOIs Primary publication Increased Copy Number Variation of mtDNA in an Array-based Digital PCR Assay Predicts Ulcerative Colitis-associated Colorectal Cancer. In vivo (Athens, Greece), 2017 PubMed DOI Related publications Identification of useful genes from multiple microarrays for ulcerative colitis diagnosis based on machine learning methods. Scientific reports, 2022 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

93 pts

Clarity: 93%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Only one side of the comparison is clearly grouped. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Not ready

55% DE readiness

Contrast completeness

10/25 pts

Only one side of the contrast is present; downstream DE needs both groups.

Minimum group size

0/20 pts

Minimum group size cannot be evaluated until a complete contrast exists.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

0/10 pts

Critical warnings must be resolved before downstream analysis.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No complete case/control contrast is available.
Critical dataset warnings must be resolved.

Next Steps

Resolve critical warnings before downstream analysis.

Analysis Preparation Checklist

4/6 ready

Group labels reviewed

Blocked

No complete case/control grouping exists yet.

Review the sample grouping table and assign both case and control groups.

Minimum sample count met

Blocked

At least one group has fewer than 2 samples.

Choose a larger dataset or merge only scientifically valid groups.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Review the grouping table for biologically meaningful differences that the automated checks may not detect.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Analysis readiness has blockers that must be resolved before DE.

Analysis preparation checklist contains blocked items.

No complete case/control or treatment/control contrast is available.

At least one comparison group has fewer than two samples.

Critical dataset warnings are present.

Assay context may require expert handling before DESeq2-style analysis.

Study design is model-system or unclear and should be reviewed before analysis.

Why This Is Ranked Here

Tumor vs normal

Not suitable Dataset does not meet the current suitability threshold.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Assay differs from search intent Microarray Search intent expects bulk RNA-seq. Assay came from Normalization rules.
Disease context Ulcerative colitis Disease context came from Normalization rules.
Likely case group Ulcerative colitis 30 samples
Likely control group No control group detected 0 samples

Intent Interpretation

Downgrade or exclusion reason Comparison: Unclear study design. Specimen: Tissue. Comparison suitability: 0%. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

Interpreted disease metadata: Ulcerative colitis.
Processed data is available for downstream review.
External evidence: PubMed links 2 publications; 2 DOIs available: PMID 28652445, PMID 35705632.
Publication context: Increased Copy Number Variation of mtDNA in an Array-based Digital PCR Assay Predicts Ulcerative Colitis-associated Colorectal Cancer.. In vivo (Athens, Greece), 2017. PMID 28652445. DOI 10.21873/invivo.11119.
Publication context: Identification of useful genes from multiple microarrays for ulcerative colitis diagnosis based on machine learning methods.. Scientific reports, 2022. PMID 35705632. DOI 10.1038/s41598-022-14048-6.

Cautions

Comparison: Unclear study design. Specimen: Tissue. Comparison suitability: 0%.
Downgraded for tissue search because study design or specimen source is unclear.
Downgraded assay: microarray cohorts are separated from the RNA-seq intent.
Unclear study design downgraded for patient tissue tumor-vs-normal search intent.
Missing or unclear metadata. Unclear study design downgraded for patient tissue tumor-vs-normal search intent.
Microarray expression context downgraded below primary bulk RNA-seq for the default tissue ranking.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because microarray cohorts should be compared separately from RNA-seq cohorts.
Missing or unclear metadata. Comparison - Unclear study design. Specimen - Tissue. Comparison suitability: 0%.
Missing or unclear metadata. Downgraded for tissue search because study design or specimen source is unclear.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

No clear control group was detected from normalized metadata.
Microarray expression context was detected; compare separately from RNA-seq cohorts.
Microarray datasets are downgraded in the patient-tissue tumor-normal intent unless secondary assays are explicitly enabled.
Patient-tissue tumor-normal intent requires clear tumor-normal grouping.

Normalized Fields

124 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source colon GSM1915850 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915850 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915851 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915851 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915852 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915852 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915853 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915853 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915854 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915854 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915855 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915855 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915856 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915856 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915857 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915857 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915858 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915858 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915859 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915859 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915860 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915860 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915861 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915861 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915862 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915862 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915863 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915863 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915864 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915864 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915865 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915865 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915866 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915866 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915867 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915867 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915868 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915868 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915869 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915869 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915870 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915870 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915871 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915871 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915872 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915872 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915873 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915873 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915874 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915874 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915875 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915875 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915876 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915876 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915877 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915877 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915878 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915878 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM1915879 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon mucosa GSM1915879 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence colorectal mucosa tissue: Colorectal mucosa sample-anatomical-source-v1 sample-local anatomical source

assay_type microarray GSE74265 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence microarray dataset_accession: GSE74265 dataset_title: Gene expression signature and mitochondrial DNA copy number variation in ulcerative colitis patients organism: Homo sapiens assay_type... keyword match keyword match: microarray

disease ulcerative colitis GSE74265 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis dataset_accession: GSE74265 dataset_title: Gene expression signature and mitochondrial DNA copy number variation in ulcerative colitis patients organism: Homo sapiens assay_type... controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915850 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m01 Patient_01 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915851 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m02 Patient_02 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915852 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m03 Patient_03 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915853 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m04 Patient_04 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915854 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m05 Patient_05 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915855 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m06 Patient_06 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915856 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m07 Patient_07 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915857 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m08 Patient_08 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915858 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m09 Patient_09 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915859 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m10 Patient_10 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915860 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m11 Patient_11 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915861 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m12 Patient_12 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915862 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m13 Patient_13 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915863 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m14 Patient_14 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915864 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m15 Patient_15 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915865 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m16 Patient_16 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915866 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m17 Patient_17 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915867 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m18 Patient_18 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915868 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m19 Patient_19 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915869 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m20 Patient_20 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915870 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m21 Patient_21 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915871 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m22 Patient_22 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915872 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m23 Patient_23 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915873 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m24 Patient_24 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915874 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m25 Patient_25 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915875 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m26 Patient_26 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915876 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m27 Patient_27 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915877 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m28 Patient_28 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915878 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m29 Patient_29 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease ulcerative colitis GSM1915879 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis Expression data of UC_m30 Patient_30 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary disease match: ulcerative colitis

organism Homo sapiens GSE74265 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE74265 dataset_title: Gene expression signature and mitochondrial DNA copy number variation in ulcerative colitis patients organism: Homo sapiens assay_type... keyword match keyword match: homo sapiens

tissue colon GSE74265 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal dataset_accession: GSE74265 dataset_title: Gene expression signature and mitochondrial DNA copy number variation in ulcerative colitis patients organism: Homo sapiens assay_type... controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915850 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m01 Patient_01 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915851 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m02 Patient_02 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915852 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m03 Patient_03 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915853 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m04 Patient_04 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915854 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m05 Patient_05 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915855 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m06 Patient_06 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915856 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m07 Patient_07 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915857 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m08 Patient_08 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915858 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m09 Patient_09 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915859 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m10 Patient_10 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915860 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m11 Patient_11 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915861 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m12 Patient_12 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915862 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m13 Patient_13 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915863 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m14 Patient_14 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915864 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m15 Patient_15 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915865 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m16 Patient_16 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915866 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m17 Patient_17 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915867 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m18 Patient_18 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915868 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m19 Patient_19 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915869 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m20 Patient_20 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915870 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m21 Patient_21 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915871 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m22 Patient_22 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915872 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m23 Patient_23 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915873 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m24 Patient_24 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915874 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m25 Patient_25 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915875 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m26 Patient_26 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915876 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m27 Patient_27 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-Low controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915877 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m28 Patient_28 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915878 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m29 Patient_29 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

tissue colon GSM1915879 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence colorectal Expression data of UC_m30 Patient_30 disease state: ulcerative colitis; tissue: Colorectal mucosa; mitochondrial dna copy number: mtDNA-High controlled vocabulary controlled vocabulary tissue match: colorectal

Sample Group Preview

30 rows shown Show Hide

Study totals: Case 30 | Control 0 | Unassigned 0 | Excluded 0 | Ambiguous 0 30 rows shown

Group	Role	Accession	Title	Source / characteristics	Reason
Ulcerative colitis	Case	GSM1915850	Expression data of UC_m01	Patient_01 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915851	Expression data of UC_m02	Patient_02 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915852	Expression data of UC_m03	Patient_03 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915853	Expression data of UC_m04	Patient_04 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915854	Expression data of UC_m05	Patient_05 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915855	Expression data of UC_m06	Patient_06 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915856	Expression data of UC_m07	Patient_07 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915857	Expression data of UC_m08	Patient_08 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915858	Expression data of UC_m09	Patient_09 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915859	Expression data of UC_m10	Patient_10 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915860	Expression data of UC_m11	Patient_11 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915861	Expression data of UC_m12	Patient_12 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915862	Expression data of UC_m13	Patient_13 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915863	Expression data of UC_m14	Patient_14 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915864	Expression data of UC_m15	Patient_15 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915865	Expression data of UC_m16	Patient_16 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915866	Expression data of UC_m17	Patient_17 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915867	Expression data of UC_m18	Patient_18 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915868	Expression data of UC_m19	Patient_19 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915869	Expression data of UC_m20	Patient_20 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915870	Expression data of UC_m21	Patient_21 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915871	Expression data of UC_m22	Patient_22 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915872	Expression data of UC_m23	Patient_23 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915873	Expression data of UC_m24	Patient_24 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915874	Expression data of UC_m25	Patient_25 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915875	Expression data of UC_m26	Patient_26 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915876	Expression data of UC_m27	Patient_27 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-Low	Case marker detected.
Ulcerative colitis	Case	GSM1915877	Expression data of UC_m28	Patient_28 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915878	Expression data of UC_m29	Patient_29 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.
Ulcerative colitis	Case	GSM1915879	Expression data of UC_m30	Patient_30 Disease state: Ulcerative colitis; Tissue: Colorectal mucosa; Mitochondrial dna copy number: MtDNA-High	Case marker detected.

Use as Discovery Cohort

External Validation Finder

Carry Siftome's disease, organism, specimen, assay, data type, and accession into a validation project. Uncertain fields remain Unknown.

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Use as Discovery Cohort