GSE75214 matching samples

GSM1426071

Uncertain

CD_colon_active_1

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_colon_active_1 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_1 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_colon_active_1 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_1 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active CD patient
Characteristics: tissue: colon; disease: Crohn's disease; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426071
sample_title: CD_colon_active_1
source_name: Biopsy from inflamed colonic mucosa of active CD patient
characteristics: tissue: colon; disease: Crohn's disease; disease activity: active

GSM1426072

Uncertain

CD_colon_active_2

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_colon_active_2 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_2 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_colon_active_2 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_2 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active CD patient
Characteristics: tissue: colon; disease: Crohn's disease; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426072
sample_title: CD_colon_active_2
source_name: Biopsy from inflamed colonic mucosa of active CD patient
characteristics: tissue: colon; disease: Crohn's disease; disease activity: active

GSM1426073

Uncertain

CD_colon_active_3

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_colon_active_3 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_3 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_colon_active_3 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_3 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active CD patient
Characteristics: tissue: colon; disease: Crohn's disease; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426073
sample_title: CD_colon_active_3
source_name: Biopsy from inflamed colonic mucosa of active CD patient
characteristics: tissue: colon; disease: Crohn's disease; disease activity: active

GSM1426074

Uncertain

CD_colon_active_4

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_colon_active_4 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_4 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_colon_active_4 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_4 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active CD patient
Characteristics: tissue: colon; disease: Crohn's disease; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426074
sample_title: CD_colon_active_4
source_name: Biopsy from inflamed colonic mucosa of active CD patient
characteristics: tissue: colon; disease: Crohn's disease; disease activity: active

GSM1426075

Uncertain

CD_colon_active_5

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_colon_active_5 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_5 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_colon_active_5 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_5 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active CD patient
Characteristics: tissue: colon; disease: Crohn's disease; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426075
sample_title: CD_colon_active_5
source_name: Biopsy from inflamed colonic mucosa of active CD patient
characteristics: tissue: colon; disease: Crohn's disease; disease activity: active

GSM1426076

Uncertain

CD_colon_active_6

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_colon_active_6 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_6 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_colon_active_6 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_6 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active CD patient
Characteristics: tissue: colon; disease: Crohn's disease; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426076
sample_title: CD_colon_active_6
source_name: Biopsy from inflamed colonic mucosa of active CD patient
characteristics: tissue: colon; disease: Crohn's disease; disease activity: active

GSM1426077

Uncertain

CD_colon_active_7

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_colon_active_7 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_7 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_colon_active_7 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_7 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active CD patient
Characteristics: tissue: colon; disease: Crohn's disease; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426077
sample_title: CD_colon_active_7
source_name: Biopsy from inflamed colonic mucosa of active CD patient
characteristics: tissue: colon; disease: Crohn's disease; disease activity: active

GSM1426078

Uncertain

CD_colon_active_8

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_colon_active_8 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_8 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_colon_active_8 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active
- CD_colon_active_8 Biopsy from inflamed colonic mucosa of active CD patient tissue: colon; disease: Crohn's disease; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active CD patient
Characteristics: tissue: colon; disease: Crohn's disease; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426078
sample_title: CD_colon_active_8
source_name: Biopsy from inflamed colonic mucosa of active CD patient
characteristics: tissue: colon; disease: Crohn's disease; disease activity: active

GSM1426079

Uncertain

control_colon_76

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_76 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_76 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_76 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_76 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426079
sample_title: control_colon_76
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426080

Uncertain

control_colon_77

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_77 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_77 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_77 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_77 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426080
sample_title: control_colon_77
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426081

Uncertain

control_colon_78

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_78 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_78 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_78 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_78 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426081
sample_title: control_colon_78
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426082

Uncertain

control_colon_79

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_79 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_79 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_79 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_79 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426082
sample_title: control_colon_79
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426083

Uncertain

control_colon_80

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_80 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_80 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_80 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_80 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426083
sample_title: control_colon_80
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426084

Uncertain

control_colon_81

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_81 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_81 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_81 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_81 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426084
sample_title: control_colon_81
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426085

Uncertain

control_colon_82

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_82 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_82 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_82 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_82 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426085
sample_title: control_colon_82
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426086

Uncertain

control_colon_83

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_83 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_83 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_83 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_83 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426086
sample_title: control_colon_83
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426087

Uncertain

control_colon_84

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_84 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_84 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_84 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_84 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426087
sample_title: control_colon_84
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426088

Uncertain

control_colon_85

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_85 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_85 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_85 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_85 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426088
sample_title: control_colon_85
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426089

Uncertain

control_colon_86

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- control_colon_86 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_86 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- control_colon_86 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal
- control_colon_86 Biopsy from normal colonic mucosa of control individual tissue: colon; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal colonic mucosa of control individual
Characteristics: tissue: colon; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426089
sample_title: control_colon_86
source_name: Biopsy from normal colonic mucosa of control individual
characteristics: tissue: colon; disease: control; disease activity: normal

GSM1426090

Uncertain

UC_colon_active_105

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_105 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_105 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_105 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_105 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426090
sample_title: UC_colon_active_105
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426091

Uncertain

UC_colon_active_106

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_106 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_106 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_106 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_106 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426091
sample_title: UC_colon_active_106
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426092

Uncertain

UC_colon_active_107

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_107 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_107 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_107 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_107 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426092
sample_title: UC_colon_active_107
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426093

Uncertain

UC_colon_active_108

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_108 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_108 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_108 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_108 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426093
sample_title: UC_colon_active_108
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426094

Uncertain

UC_colon_active_109

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_109 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_109 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_109 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_109 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426094
sample_title: UC_colon_active_109
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426095

Uncertain

UC_colon_active_110

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_110 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_110 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_110 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_110 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426095
sample_title: UC_colon_active_110
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426096

Uncertain

UC_colon_active_111

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_111 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_111 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_111 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_111 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426096
sample_title: UC_colon_active_111
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426097

Uncertain

UC_colon_active_112

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_112 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_112 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_112 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_112 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426097
sample_title: UC_colon_active_112
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426098

Uncertain

UC_colon_active_113

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_113 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_113 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_113 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_113 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426098
sample_title: UC_colon_active_113
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426099

Uncertain

UC_colon_active_114

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_114 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_114 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_114 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_114 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426099
sample_title: UC_colon_active_114
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426100

Uncertain

UC_colon_active_115

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_115 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_115 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_115 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_115 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426100
sample_title: UC_colon_active_115
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426101

Uncertain

UC_colon_active_116

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_116 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_116 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_116 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_116 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426101
sample_title: UC_colon_active_116
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426102

Uncertain

UC_colon_active_117

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_117 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_117 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_117 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_117 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426102
sample_title: UC_colon_active_117
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426103

Uncertain

UC_colon_active_118

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_118 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_118 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_118 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_118 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426103
sample_title: UC_colon_active_118
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426104

Uncertain

UC_colon_active_119

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_119 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_119 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_119 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_119 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426104
sample_title: UC_colon_active_119
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426105

Uncertain

UC_colon_active_120

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_120 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_120 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_120 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_120 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426105
sample_title: UC_colon_active_120
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426106

Uncertain

UC_colon_active_121

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_121 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_121 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_121 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_121 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426106
sample_title: UC_colon_active_121
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426107

Uncertain

UC_colon_active_122

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_122 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_122 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_122 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_122 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426107
sample_title: UC_colon_active_122
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426108

Uncertain

UC_colon_active_123

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_123 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_123 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_123 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_123 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426108
sample_title: UC_colon_active_123
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426109

Uncertain

UC_colon_active_124

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_124 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_124 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_124 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_124 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426109
sample_title: UC_colon_active_124
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426110

Uncertain

UC_colon_active_125

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_125 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_125 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_125 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_125 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426110
sample_title: UC_colon_active_125
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426111

Uncertain

UC_colon_active_126

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_126 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_126 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_126 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_126 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426111
sample_title: UC_colon_active_126
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426112

Uncertain

UC_colon_active_127

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_127 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_127 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_127 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_127 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426112
sample_title: UC_colon_active_127
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426113

Uncertain

UC_colon_active_128

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_128 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_128 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_128 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_128 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426113
sample_title: UC_colon_active_128
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426114

Uncertain

UC_colon_active_129

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_129 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_129 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_129 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_129 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426114
sample_title: UC_colon_active_129
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426115

Uncertain

UC_colon_active_130

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_130 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_130 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_130 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_130 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426115
sample_title: UC_colon_active_130
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426116

Uncertain

UC_colon_active_131

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_131 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_131 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_131 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_131 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426116
sample_title: UC_colon_active_131
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426117

Uncertain

UC_colon_active_132

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_132 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_132 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_132 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_132 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426117
sample_title: UC_colon_active_132
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426118

Uncertain

UC_colon_active_133

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_133 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_133 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_133 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_133 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426118
sample_title: UC_colon_active_133
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426119

Uncertain

UC_colon_active_134

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_134 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_134 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_134 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_134 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426119
sample_title: UC_colon_active_134
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426120

Uncertain

UC_colon_active_135

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_135 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_135 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_135 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_135 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426120
sample_title: UC_colon_active_135
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426121

Uncertain

UC_colon_active_136

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_136 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_136 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_136 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_136 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426121
sample_title: UC_colon_active_136
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426122

Uncertain

UC_colon_active_137

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_137 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_137 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_137 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_137 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426122
sample_title: UC_colon_active_137
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426123

Uncertain

UC_colon_active_138

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_138 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_138 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_138 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_138 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426123
sample_title: UC_colon_active_138
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426124

Uncertain

UC_colon_active_139

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_139 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_139 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_139 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_139 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426124
sample_title: UC_colon_active_139
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426125

Uncertain

UC_colon_active_140

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_140 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_140 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_140 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_140 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426125
sample_title: UC_colon_active_140
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426126

Uncertain

UC_colon_active_141

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_141 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_141 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_141 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_141 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426126
sample_title: UC_colon_active_141
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426127

Uncertain

UC_colon_active_142

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_142 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_142 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_142 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_142 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426127
sample_title: UC_colon_active_142
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426128

Uncertain

UC_colon_active_143

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_143 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_143 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_143 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_143 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426128
sample_title: UC_colon_active_143
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426129

Uncertain

UC_colon_active_144

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_144 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_144 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_144 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_144 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426129
sample_title: UC_colon_active_144
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426130

Uncertain

UC_colon_active_145

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_145 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_145 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_145 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_145 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426130
sample_title: UC_colon_active_145
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426131

Uncertain

UC_colon_active_146

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_146 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_146 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_146 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_146 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426131
sample_title: UC_colon_active_146
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426132

Uncertain

UC_colon_active_147

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_147 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_147 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_147 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_147 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426132
sample_title: UC_colon_active_147
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426133

Uncertain

UC_colon_active_148

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_148 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_148 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_148 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_148 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426133
sample_title: UC_colon_active_148
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426134

Uncertain

UC_colon_active_149

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_149 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_149 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_149 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_149 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426134
sample_title: UC_colon_active_149
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426135

Uncertain

UC_colon_active_150

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_150 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_150 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_150 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_150 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426135
sample_title: UC_colon_active_150
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426136

Uncertain

UC_colon_active_151

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_151 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_151 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_151 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_151 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426136
sample_title: UC_colon_active_151
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426137

Uncertain

UC_colon_active_152

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_152 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_152 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_152 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_152 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426137
sample_title: UC_colon_active_152
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426138

Uncertain

UC_colon_active_153

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_153 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_153 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_153 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_153 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426138
sample_title: UC_colon_active_153
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426139

Uncertain

UC_colon_active_154

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_154 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_154 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_154 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_154 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426139
sample_title: UC_colon_active_154
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426140

Uncertain

UC_colon_active_155

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_155 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_155 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_155 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_155 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426140
sample_title: UC_colon_active_155
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426141

Uncertain

UC_colon_active_156

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_156 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_156 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_156 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_156 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426141
sample_title: UC_colon_active_156
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426142

Uncertain

UC_colon_active_157

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_157 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_157 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_157 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_157 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426142
sample_title: UC_colon_active_157
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426143

Uncertain

UC_colon_active_158

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_158 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_158 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_158 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_158 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426143
sample_title: UC_colon_active_158
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426144

Uncertain

UC_colon_active_159

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_159 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_159 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_159 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_159 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426144
sample_title: UC_colon_active_159
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426145

Uncertain

UC_colon_active_160

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_160 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_160 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_160 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_160 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426145
sample_title: UC_colon_active_160
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426146

Uncertain

UC_colon_active_161

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_161 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_161 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_161 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_161 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426146
sample_title: UC_colon_active_161
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426147

Uncertain

UC_colon_active_162

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_162 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_162 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_162 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_162 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426147
sample_title: UC_colon_active_162
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426148

Uncertain

UC_colon_active_163

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_163 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_163 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_163 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_163 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426148
sample_title: UC_colon_active_163
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426149

Uncertain

UC_colon_active_164

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_164 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_164 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_164 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_164 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426149
sample_title: UC_colon_active_164
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426150

Uncertain

UC_colon_active_165

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_165 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_165 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_165 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_165 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426150
sample_title: UC_colon_active_165
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426151

Uncertain

UC_colon_active_166

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_166 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_166 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_166 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_166 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426151
sample_title: UC_colon_active_166
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426152

Uncertain

UC_colon_active_167

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_167 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_167 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_167 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_167 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426152
sample_title: UC_colon_active_167
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426153

Uncertain

UC_colon_active_168

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_168 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_168 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_168 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_168 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426153
sample_title: UC_colon_active_168
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426154

Uncertain

UC_colon_active_169

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_169 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_169 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_169 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_169 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426154
sample_title: UC_colon_active_169
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426155

Uncertain

UC_colon_active_170

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_170 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_170 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_170 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_170 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426155
sample_title: UC_colon_active_170
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426156

Uncertain

UC_colon_active_171

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_171 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_171 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_171 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_171 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426156
sample_title: UC_colon_active_171
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426157

Uncertain

UC_colon_active_172

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_172 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_172 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_172 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_172 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426157
sample_title: UC_colon_active_172
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426158

Uncertain

UC_colon_active_173

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_173 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_173 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_173 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_173 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426158
sample_title: UC_colon_active_173
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426159

Uncertain

UC_colon_active_174

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_174 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_174 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_174 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_174 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426159
sample_title: UC_colon_active_174
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426160

Uncertain

UC_colon_active_175

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_175 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_175 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_175 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_175 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426160
sample_title: UC_colon_active_175
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426161

Uncertain

UC_colon_active_176

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_176 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_176 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_176 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_176 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426161
sample_title: UC_colon_active_176
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426162

Uncertain

UC_colon_active_177

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_177 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_177 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_177 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_177 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426162
sample_title: UC_colon_active_177
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426163

Uncertain

UC_colon_active_178

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_active_178 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_178 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_active_178 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active
- UC_colon_active_178 Biopsy from inflamed colonic mucosa of active UC patient tissue: colon; disease: ulcerative colitis; disease activity: active

Source metadata

Source name: Biopsy from inflamed colonic mucosa of active UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426163
sample_title: UC_colon_active_178
source_name: Biopsy from inflamed colonic mucosa of active UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: active

GSM1426164

Uncertain

UC_colon_inactive_179

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_179 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_179 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_179 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_179 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426164
sample_title: UC_colon_inactive_179
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426165

Uncertain

UC_colon_inactive_180

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_180 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_180 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_180 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_180 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426165
sample_title: UC_colon_inactive_180
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426166

Uncertain

UC_colon_inactive_181

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_181 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_181 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_181 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_181 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426166
sample_title: UC_colon_inactive_181
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426167

Uncertain

UC_colon_inactive_182

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_182 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_182 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_182 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_182 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426167
sample_title: UC_colon_inactive_182
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426168

Uncertain

UC_colon_inactive_183

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_183 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_183 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_183 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_183 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426168
sample_title: UC_colon_inactive_183
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426169

Uncertain

UC_colon_inactive_184

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_184 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_184 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_184 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_184 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426169
sample_title: UC_colon_inactive_184
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426170

Uncertain

UC_colon_inactive_185

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_185 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_185 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_185 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_185 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426170
sample_title: UC_colon_inactive_185
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426171

Uncertain

UC_colon_inactive_186

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_186 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_186 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_186 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_186 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426171
sample_title: UC_colon_inactive_186
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426172

Uncertain

UC_colon_inactive_187

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_187 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_187 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_187 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_187 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426172
sample_title: UC_colon_inactive_187
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426173

Uncertain

UC_colon_inactive_188

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_188 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_188 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_188 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_188 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426173
sample_title: UC_colon_inactive_188
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426174

Uncertain

UC_colon_inactive_189

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_189 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_189 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_189 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_189 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426174
sample_title: UC_colon_inactive_189
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426175

Uncertain

UC_colon_inactive_190

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_190 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_190 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_190 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_190 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426175
sample_title: UC_colon_inactive_190
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426176

Uncertain

UC_colon_inactive_191

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_191 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_191 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_191 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_191 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426176
sample_title: UC_colon_inactive_191
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426177

Uncertain

UC_colon_inactive_192

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_192 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_192 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_192 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_192 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426177
sample_title: UC_colon_inactive_192
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426178

Uncertain

UC_colon_inactive_193

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_193 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_193 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_193 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_193 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426178
sample_title: UC_colon_inactive_193
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426179

Uncertain

UC_colon_inactive_194

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_194 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_194 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_194 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_194 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426179
sample_title: UC_colon_inactive_194
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426180

Uncertain

UC_colon_inactive_195

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_195 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_195 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_195 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_195 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426180
sample_title: UC_colon_inactive_195
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426181

Uncertain

UC_colon_inactive_196

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_196 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_196 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_196 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_196 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426181
sample_title: UC_colon_inactive_196
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426182

Uncertain

UC_colon_inactive_197

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_197 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_197 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_197 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_197 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426182
sample_title: UC_colon_inactive_197
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426183

Uncertain

UC_colon_inactive_198

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_198 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_198 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_198 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_198 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426183
sample_title: UC_colon_inactive_198
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426184

Uncertain

UC_colon_inactive_199

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_199 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_199 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_199 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_199 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426184
sample_title: UC_colon_inactive_199
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426185

Uncertain

UC_colon_inactive_200

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_200 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_200 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_200 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_200 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426185
sample_title: UC_colon_inactive_200
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1426186

Uncertain

UC_colon_inactive_201

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_201 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_201 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- UC_colon_inactive_201 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive
- UC_colon_inactive_201 Biopsy from uninflamed colonic mucosa of inactive UC patient tissue: colon; disease: ulcerative colitis; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed colonic mucosa of inactive UC patient
Characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1426186
sample_title: UC_colon_inactive_201
source_name: Biopsy from uninflamed colonic mucosa of inactive UC patient
characteristics: tissue: colon; disease: ulcerative colitis; disease activity: inactive

GSM1945759

Uncertain

CD_ileum_active_9

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_9 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_9 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_9 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_9 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945759
sample_title: CD_ileum_active_9
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945760

Uncertain

CD_ileum_active_10

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_10 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_10 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_10 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_10 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945760
sample_title: CD_ileum_active_10
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945761

Uncertain

CD_ileum_active_11

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_11 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_11 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_11 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_11 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945761
sample_title: CD_ileum_active_11
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945762

Uncertain

CD_ileum_active_12

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_12 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_12 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_12 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_12 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945762
sample_title: CD_ileum_active_12
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945763

Uncertain

CD_ileum_active_13

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_13 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_13 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_13 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_13 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945763
sample_title: CD_ileum_active_13
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945764

Uncertain

CD_ileum_active_14

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_14 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_14 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_14 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_14 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945764
sample_title: CD_ileum_active_14
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945765

Uncertain

CD_ileum_active_15

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_15 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_15 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_15 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_15 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945765
sample_title: CD_ileum_active_15
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945766

Uncertain

CD_ileum_active_16

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_16 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_16 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_16 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_16 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945766
sample_title: CD_ileum_active_16
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945767

Uncertain

CD_ileum_active_17

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_17 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_17 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_17 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_17 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945767
sample_title: CD_ileum_active_17
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945768

Uncertain

CD_ileum_active_18

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_18 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_18 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_18 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_18 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945768
sample_title: CD_ileum_active_18
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945769

Uncertain

CD_ileum_active_19

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_19 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_19 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_19 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_19 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945769
sample_title: CD_ileum_active_19
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945770

Uncertain

CD_ileum_active_20

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_20 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_20 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_20 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_20 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945770
sample_title: CD_ileum_active_20
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945771

Uncertain

CD_ileum_active_21

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_21 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_21 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_21 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_21 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945771
sample_title: CD_ileum_active_21
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945772

Uncertain

CD_ileum_active_22

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_22 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_22 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_22 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_22 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945772
sample_title: CD_ileum_active_22
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945773

Uncertain

CD_ileum_active_23

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_23 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_23 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_23 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_23 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945773
sample_title: CD_ileum_active_23
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945774

Uncertain

CD_ileum_active_24

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_24 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_24 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_24 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_24 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945774
sample_title: CD_ileum_active_24
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945775

Uncertain

CD_ileum_active_25

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_25 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_25 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_25 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_25 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945775
sample_title: CD_ileum_active_25
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945776

Uncertain

CD_ileum_active_26

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_26 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_26 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_26 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_26 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945776
sample_title: CD_ileum_active_26
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945777

Uncertain

CD_ileum_active_27

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_27 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_27 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_27 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_27 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945777
sample_title: CD_ileum_active_27
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945778

Uncertain

CD_ileum_active_28

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_28 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_28 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_28 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_28 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945778
sample_title: CD_ileum_active_28
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945779

Uncertain

CD_ileum_active_29

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_29 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_29 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_29 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_29 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945779
sample_title: CD_ileum_active_29
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945780

Uncertain

CD_ileum_active_30

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_30 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_30 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_30 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_30 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945780
sample_title: CD_ileum_active_30
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945781

Uncertain

CD_ileum_active_31

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_31 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_31 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_31 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_31 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945781
sample_title: CD_ileum_active_31
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945782

Uncertain

CD_ileum_active_32

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_32 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_32 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_32 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_32 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945782
sample_title: CD_ileum_active_32
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945783

Uncertain

CD_ileum_active_33

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_33 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_33 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_33 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_33 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945783
sample_title: CD_ileum_active_33
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945784

Uncertain

CD_ileum_active_34

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_34 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_34 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_34 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_34 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945784
sample_title: CD_ileum_active_34
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945785

Uncertain

CD_ileum_active_35

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_35 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_35 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_35 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_35 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945785
sample_title: CD_ileum_active_35
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945786

Uncertain

CD_ileum_active_36

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_36 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_36 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_36 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_36 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945786
sample_title: CD_ileum_active_36
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945787

Uncertain

CD_ileum_active_37

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_37 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_37 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_37 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_37 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945787
sample_title: CD_ileum_active_37
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945788

Uncertain

CD_ileum_active_38

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_38 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_38 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_38 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_38 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945788
sample_title: CD_ileum_active_38
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945789

Uncertain

CD_ileum_active_39

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_39 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_39 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_39 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_39 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945789
sample_title: CD_ileum_active_39
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945790

Uncertain

CD_ileum_active_40

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_40 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_40 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_40 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_40 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945790
sample_title: CD_ileum_active_40
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945791

Uncertain

CD_ileum_active_41

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_41 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_41 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_41 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_41 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945791
sample_title: CD_ileum_active_41
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945792

Uncertain

CD_ileum_active_42

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_42 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_42 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_42 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_42 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945792
sample_title: CD_ileum_active_42
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945793

Uncertain

CD_ileum_active_43

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_43 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_43 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_43 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_43 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945793
sample_title: CD_ileum_active_43
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945794

Uncertain

CD_ileum_active_44

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_44 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_44 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_44 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_44 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945794
sample_title: CD_ileum_active_44
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945795

Uncertain

CD_ileum_active_45

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_45 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_45 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_45 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_45 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945795
sample_title: CD_ileum_active_45
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945796

Uncertain

CD_ileum_active_46

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_46 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_46 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_46 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_46 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945796
sample_title: CD_ileum_active_46
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945797

Uncertain

CD_ileum_active_47

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_47 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_47 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_47 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_47 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945797
sample_title: CD_ileum_active_47
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945798

Uncertain

CD_ileum_active_48

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_48 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_48 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_48 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_48 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945798
sample_title: CD_ileum_active_48
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945799

Uncertain

CD_ileum_active_49

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_49 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_49 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_49 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_49 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945799
sample_title: CD_ileum_active_49
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945800

Uncertain

CD_ileum_active_50

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_50 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_50 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_50 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_50 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945800
sample_title: CD_ileum_active_50
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945801

Uncertain

CD_ileum_active_51

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_51 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_51 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_51 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_51 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945801
sample_title: CD_ileum_active_51
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945802

Uncertain

CD_ileum_active_52

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_52 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_52 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_52 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_52 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945802
sample_title: CD_ileum_active_52
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945803

Uncertain

CD_ileum_active_53

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_53 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_53 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_53 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_53 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945803
sample_title: CD_ileum_active_53
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945804

Uncertain

CD_ileum_active_54

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_54 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_54 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_54 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_54 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945804
sample_title: CD_ileum_active_54
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945805

Uncertain

CD_ileum_active_55

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_55 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_55 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_55 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_55 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945805
sample_title: CD_ileum_active_55
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945806

Uncertain

CD_ileum_active_56

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_56 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_56 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_56 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_56 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945806
sample_title: CD_ileum_active_56
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945807

Uncertain

CD_ileum_active_57

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_57 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_57 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_57 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_57 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945807
sample_title: CD_ileum_active_57
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945808

Uncertain

CD_ileum_active_58

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_58 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_58 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_58 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_58 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945808
sample_title: CD_ileum_active_58
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945809

Uncertain

CD_ileum_active_59

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_59 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_59 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_active_59 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active
- CD_ileum_active_59 Biopsy from inflamed ileal mucosa of active CD patient tissue: ileum; disease: CD; disease activity: active

Source metadata

Source name: Biopsy from inflamed ileal mucosa of active CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: active
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945809
sample_title: CD_ileum_active_59
source_name: Biopsy from inflamed ileal mucosa of active CD patient
characteristics: tissue: ileum; disease: CD; disease activity: active

GSM1945810

Uncertain

CD_ileum_inactive_60

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_60 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_60 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_60 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_60 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945810
sample_title: CD_ileum_inactive_60
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945811

Uncertain

CD_ileum_inactive_61

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_61 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_61 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_61 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_61 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945811
sample_title: CD_ileum_inactive_61
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945812

Uncertain

CD_ileum_inactive_62

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_62 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_62 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_62 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_62 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945812
sample_title: CD_ileum_inactive_62
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945813

Uncertain

CD_ileum_inactive_63

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_63 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_63 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_63 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_63 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945813
sample_title: CD_ileum_inactive_63
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945814

Uncertain

CD_ileum_inactive_64

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_64 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_64 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_64 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_64 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945814
sample_title: CD_ileum_inactive_64
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945815

Uncertain

CD_ileum_inactive_65

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_65 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_65 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_65 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_65 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945815
sample_title: CD_ileum_inactive_65
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945816

Uncertain

CD_ileum_inactive_66

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_66 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_66 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_66 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_66 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945816
sample_title: CD_ileum_inactive_66
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945817

Uncertain

CD_ileum_inactive_67

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_67 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_67 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_67 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_67 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945817
sample_title: CD_ileum_inactive_67
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945818

Uncertain

CD_ileum_inactive_68

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_68 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_68 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_68 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_68 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945818
sample_title: CD_ileum_inactive_68
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945819

Uncertain

CD_ileum_inactive_69

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_69 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_69 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_69 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_69 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945819
sample_title: CD_ileum_inactive_69
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945820

Uncertain

CD_ileum_inactive_70

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_70 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_70 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_70 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_70 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945820
sample_title: CD_ileum_inactive_70
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945821

Uncertain

CD_ileum_inactive_71

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_71 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_71 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_71 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_71 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945821
sample_title: CD_ileum_inactive_71
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945822

Uncertain

CD_ileum_inactive_72

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_72 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_72 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_72 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_72 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945822
sample_title: CD_ileum_inactive_72
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945823

Uncertain

CD_ileum_inactive_73

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_73 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_73 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_73 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_73 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945823
sample_title: CD_ileum_inactive_73
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945824

Uncertain

CD_ileum_inactive_74

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_74 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_74 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_74 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_74 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945824
sample_title: CD_ileum_inactive_74
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945825

Uncertain

CD_ileum_inactive_75

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_75 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_75 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- CD_ileum_inactive_75 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive
- CD_ileum_inactive_75 Biopsy from uninflamed ileal mucosa of inactive CD patient tissue: ileum; disease: CD; disease activity: inactive

Source metadata

Source name: Biopsy from uninflamed ileal mucosa of inactive CD patient
Characteristics: tissue: ileum; disease: CD; disease activity: inactive
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945825
sample_title: CD_ileum_inactive_75
source_name: Biopsy from uninflamed ileal mucosa of inactive CD patient
characteristics: tissue: ileum; disease: CD; disease activity: inactive

GSM1945826

Uncertain

controle_ileum_87

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_87 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_87 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_87 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_87 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945826
sample_title: controle_ileum_87
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945827

Uncertain

controle_ileum_88

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_88 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_88 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_88 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_88 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945827
sample_title: controle_ileum_88
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945828

Uncertain

controle_ileum_89

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_89 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_89 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_89 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_89 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945828
sample_title: controle_ileum_89
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945829

Uncertain

controle_ileum_90

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_90 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_90 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_90 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_90 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945829
sample_title: controle_ileum_90
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945830

Uncertain

controle_ileum_91

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_91 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_91 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_91 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_91 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945830
sample_title: controle_ileum_91
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945831

Uncertain

controle_ileum_92

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_92 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_92 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_92 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_92 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945831
sample_title: controle_ileum_92
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945832

Uncertain

controle_ileum_93

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_93 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_93 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_93 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_93 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945832
sample_title: controle_ileum_93
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945833

Uncertain

controle_ileum_94

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_94 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_94 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_94 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_94 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945833
sample_title: controle_ileum_94
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945834

Uncertain

controle_ileum_95

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_95 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_95 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_95 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_95 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945834
sample_title: controle_ileum_95
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945835

Uncertain

controle_ileum_96

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_96 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_96 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_96 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_96 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945835
sample_title: controle_ileum_96
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

GSM1945836

Uncertain

controle_ileum_97

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Sample-local control marker detected.

Requirements and decision evidence

organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- controle_ileum_97 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_97 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- controle_ileum_97 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal
- controle_ileum_97 Biopsy from normal ileal mucosa of control individual tissue: ileum; disease: control; disease activity: normal

Source metadata

Source name: Biopsy from normal ileal mucosa of control individual
Characteristics: tissue: ileum; disease: control; disease activity: normal
Description: Not reported
Indexed organism evidence: INFERRED · PARENT_INHERITED: Not reported
Indexed assay evidence: INFERRED · PARENT_INHERITED: Not reported
Source: GEO

Original indexed metadata

sample_accession: GSM1945836
sample_title: controle_ileum_97
source_name: Biopsy from normal ileal mucosa of control individual
characteristics: tissue: ileum; disease: control; disease activity: normal

Included samples (0)

Uncertain samples (194)