Matching samples

GSE77013 · A long noncoding RNA signature in Ulcerative Colitis

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

12 case / 0 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (19)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM2042464

Uncertain

Con1

Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.

Requirements and decision evidence
  • Case: organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • Case: assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • Case: specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
          • Supported by the indexed evidence.
          • Case: specimen category excludes: Biofluid — Meets requirement
            • Supported by the indexed evidence.
            • Control: organism: Homo sapiens — Insufficient evidence
              • The required value is not reported.
              • Control: assay type: bulk RNA-seq — Insufficient evidence
                • The required value is not reported.
                • Control: specimen category: Tissue or biopsy — Insufficient evidence
                  • The required value is not reported.
                  • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • Control: specimen category excludes: Biofluid — Meets requirement
                      • Supported by the indexed evidence.
                      Source metadata
                      Source name
                      Colon tissue
                      Characteristics
                      age: 31; gender: Male; location: colon; sample type: control
                      Description
                      Not reported
                      Indexed organism evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Indexed assay evidence
                      INFERRED · PARENT_INHERITED: Not reported
                      Source
                      GEO
                      Original indexed metadata
                      sample_accession: GSM2042464
sample_title: Con1
source_name: Colon tissue
characteristics: age: 31; gender: Male; location: colon; sample type: control

                      GSM2042465

                      Uncertain

                      Con2

                      Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.

                      Requirements and decision evidence
                      • Case: organism: Homo sapiens — Insufficient evidence
                        • The required value is not reported.
                        • Case: assay type: bulk RNA-seq — Insufficient evidence
                          • The required value is not reported.
                          • Case: specimen category: Tissue or biopsy — Insufficient evidence
                            • The required value is not reported.
                            • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                              • Supported by the indexed evidence.
                              • Case: specimen category excludes: Biofluid — Meets requirement
                                • Supported by the indexed evidence.
                                • Control: organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • Control: assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                        • Supported by the indexed evidence.
                                        • Control: specimen category excludes: Biofluid — Meets requirement
                                          • Supported by the indexed evidence.
                                          Source metadata
                                          Source name
                                          Colon tissue
                                          Characteristics
                                          age: 45; gender: Female; location: colon; sample type: control
                                          Description
                                          Not reported
                                          Indexed organism evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Indexed assay evidence
                                          INFERRED · PARENT_INHERITED: Not reported
                                          Source
                                          GEO
                                          Original indexed metadata
                                          sample_accession: GSM2042465
sample_title: Con2
source_name: Colon tissue
characteristics: age: 45; gender: Female; location: colon; sample type: control

                                          GSM2042466

                                          Uncertain

                                          Con3

                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.

                                          Requirements and decision evidence
                                          • Case: organism: Homo sapiens — Insufficient evidence
                                            • The required value is not reported.
                                            • Case: assay type: bulk RNA-seq — Insufficient evidence
                                              • The required value is not reported.
                                              • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                • The required value is not reported.
                                                • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • Case: specimen category excludes: Biofluid — Meets requirement
                                                    • Supported by the indexed evidence.
                                                    • Control: organism: Homo sapiens — Insufficient evidence
                                                      • The required value is not reported.
                                                      • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                        • The required value is not reported.
                                                        • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                          • The required value is not reported.
                                                          • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                            • Supported by the indexed evidence.
                                                            • Control: specimen category excludes: Biofluid — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              Source metadata
                                                              Source name
                                                              Colon tissue
                                                              Characteristics
                                                              age: 26; gender: Male; location: colon:sigmoid; sample type: control
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM2042466
sample_title: Con3
source_name: Colon tissue
characteristics: age: 26; gender: Male; location: colon:sigmoid; sample type: control

                                                              GSM2042467

                                                              Uncertain

                                                              Con4

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                              Requirements and decision evidence
                                                              • Case: organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                      • Supported by the indexed evidence.
                                                                      • Case: specimen category excludes: Biofluid — Meets requirement
                                                                        • Supported by the indexed evidence.
                                                                        • Control: organism: Homo sapiens — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • Control: specimen category excludes: Biofluid — Meets requirement
                                                                                  • Supported by the indexed evidence.
                                                                                  Source metadata
                                                                                  Source name
                                                                                  Colon tissue
                                                                                  Characteristics
                                                                                  age: 46; gender: Male; location: colon; sample type: control
                                                                                  Description
                                                                                  Not reported
                                                                                  Indexed organism evidence
                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                  Indexed assay evidence
                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                  Source
                                                                                  GEO
                                                                                  Original indexed metadata
                                                                                  sample_accession: GSM2042467
sample_title: Con4
source_name: Colon tissue
characteristics: age: 46; gender: Male; location: colon; sample type: control

                                                                                  GSM2042468

                                                                                  Uncertain

                                                                                  Con5

                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                  Requirements and decision evidence
                                                                                  • Case: organism: Homo sapiens — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                          • Supported by the indexed evidence.
                                                                                          • Case: specimen category excludes: Biofluid — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            • Control: organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                    • Supported by the indexed evidence.
                                                                                                    • Control: specimen category excludes: Biofluid — Meets requirement
                                                                                                      • Supported by the indexed evidence.
                                                                                                      Source metadata
                                                                                                      Source name
                                                                                                      Colon tissue
                                                                                                      Characteristics
                                                                                                      age: 50; gender: Female; location: colon; sample type: control
                                                                                                      Description
                                                                                                      Not reported
                                                                                                      Indexed organism evidence
                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                      Indexed assay evidence
                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                      Source
                                                                                                      GEO
                                                                                                      Original indexed metadata
                                                                                                      sample_accession: GSM2042468
sample_title: Con5
source_name: Colon tissue
characteristics: age: 50; gender: Female; location: colon; sample type: control

                                                                                                      GSM2042469

                                                                                                      Uncertain

                                                                                                      Con6

                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                      Requirements and decision evidence
                                                                                                      • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • Case: specimen category excludes: Biofluid — Meets requirement
                                                                                                                • Supported by the indexed evidence.
                                                                                                                • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                        • Supported by the indexed evidence.
                                                                                                                        • Control: specimen category excludes: Biofluid — Meets requirement
                                                                                                                          • Supported by the indexed evidence.
                                                                                                                          Source metadata
                                                                                                                          Source name
                                                                                                                          Colon tissue
                                                                                                                          Characteristics
                                                                                                                          age: 60; gender: Female; location: colon; sample type: control
                                                                                                                          Description
                                                                                                                          Not reported
                                                                                                                          Indexed organism evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Indexed assay evidence
                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                          Source
                                                                                                                          GEO
                                                                                                                          Original indexed metadata
                                                                                                                          sample_accession: GSM2042469
sample_title: Con6
source_name: Colon tissue
characteristics: age: 60; gender: Female; location: colon; sample type: control

                                                                                                                          GSM2042470

                                                                                                                          Uncertain

                                                                                                                          Con7

                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. Case: organism: Homo sapiens — Insufficient evidence. Case: assay type: bulk RNA-seq — Insufficient evidence. Case: specimen category: Tissue or biopsy — Insufficient evidence. Control: organism: Homo sapiens — Insufficient evidence. Control: assay type: bulk RNA-seq — Insufficient evidence. Control: specimen category: Tissue or biopsy — Insufficient evidence. Study role: No explicit case or control marker detected.

                                                                                                                          Requirements and decision evidence
                                                                                                                          • Case: organism: Homo sapiens — Insufficient evidence
                                                                                                                            • The required value is not reported.
                                                                                                                            • Case: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                              • The required value is not reported.
                                                                                                                              • Case: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                • The required value is not reported.
                                                                                                                                • Case: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                  • Case: specimen category excludes: Biofluid — Meets requirement
                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                    • Control: organism: Homo sapiens — Insufficient evidence
                                                                                                                                      • The required value is not reported.
                                                                                                                                      • Control: assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                        • The required value is not reported.
                                                                                                                                        • Control: specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                          • The required value is not reported.
                                                                                                                                          • Control: excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                            • Control: specimen category excludes: Biofluid — Meets requirement
                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                              Source metadata
                                                                                                                                              Source name
                                                                                                                                              Colon tissue
                                                                                                                                              Characteristics
                                                                                                                                              age: 56; gender: Male; location: colon; sample type: control
                                                                                                                                              Description
                                                                                                                                              Not reported
                                                                                                                                              Indexed organism evidence
                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                              Indexed assay evidence
                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                              Source
                                                                                                                                              GEO
                                                                                                                                              Original indexed metadata
                                                                                                                                              sample_accession: GSM2042470
sample_title: Con7
source_name: Colon tissue
characteristics: age: 56; gender: Male; location: colon; sample type: control

                                                                                                                                              GSM2042471

                                                                                                                                              Uncertain

                                                                                                                                              UCA1

                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                              Requirements and decision evidence
                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                • The required value is not reported.
                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                  • The required value is not reported.
                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                    • The required value is not reported.
                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                        Source metadata
                                                                                                                                                        Source name
                                                                                                                                                        Colon tissue
                                                                                                                                                        Characteristics
                                                                                                                                                        age: 30; gender: Female; location: colon; sample type: active ulcerative colitis
                                                                                                                                                        Description
                                                                                                                                                        Not reported
                                                                                                                                                        Indexed organism evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Indexed assay evidence
                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                        Source
                                                                                                                                                        GEO
                                                                                                                                                        Original indexed metadata
                                                                                                                                                        sample_accession: GSM2042471
sample_title: UCA1
source_name: Colon tissue
characteristics: age: 30; gender: Female; location: colon; sample type: active ulcerative colitis

                                                                                                                                                        GSM2042472

                                                                                                                                                        Uncertain

                                                                                                                                                        UCA2

                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                          • The required value is not reported.
                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                            • The required value is not reported.
                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                              • The required value is not reported.
                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                  Source metadata
                                                                                                                                                                  Source name
                                                                                                                                                                  Colon tissue
                                                                                                                                                                  Characteristics
                                                                                                                                                                  age: 56; gender: Female; location: colon:left; sample type: active ulcerative colitis
                                                                                                                                                                  Description
                                                                                                                                                                  Not reported
                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                  Source
                                                                                                                                                                  GEO
                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                  sample_accession: GSM2042472
sample_title: UCA2
source_name: Colon tissue
characteristics: age: 56; gender: Female; location: colon:left; sample type: active ulcerative colitis

                                                                                                                                                                  GSM2042473

                                                                                                                                                                  Uncertain

                                                                                                                                                                  UCA3

                                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                            Source metadata
                                                                                                                                                                            Source name
                                                                                                                                                                            Colon tissue
                                                                                                                                                                            Characteristics
                                                                                                                                                                            age: 26; gender: Female; location: colon; sample type: active ulcerative colitis
                                                                                                                                                                            Description
                                                                                                                                                                            Not reported
                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                            Source
                                                                                                                                                                            GEO
                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                            sample_accession: GSM2042473
sample_title: UCA3
source_name: Colon tissue
characteristics: age: 26; gender: Female; location: colon; sample type: active ulcerative colitis

                                                                                                                                                                            GSM2042474

                                                                                                                                                                            Uncertain

                                                                                                                                                                            UCA4

                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                      Source metadata
                                                                                                                                                                                      Source name
                                                                                                                                                                                      Colon tissue
                                                                                                                                                                                      Characteristics
                                                                                                                                                                                      age: 46; gender: Female; location: colon; sample type: active ulcerative colitis
                                                                                                                                                                                      Description
                                                                                                                                                                                      Not reported
                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                      Source
                                                                                                                                                                                      GEO
                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                      sample_accession: GSM2042474
sample_title: UCA4
source_name: Colon tissue
characteristics: age: 46; gender: Female; location: colon; sample type: active ulcerative colitis

                                                                                                                                                                                      GSM2042475

                                                                                                                                                                                      Uncertain

                                                                                                                                                                                      UCA5

                                                                                                                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                      Requirements and decision evidence
                                                                                                                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                              • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                Source metadata
                                                                                                                                                                                                Source name
                                                                                                                                                                                                Colon tissue
                                                                                                                                                                                                Characteristics
                                                                                                                                                                                                age: 29; gender: Male; location: colon; sample type: active ulcerative colitis
                                                                                                                                                                                                Description
                                                                                                                                                                                                Not reported
                                                                                                                                                                                                Indexed organism evidence
                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                Indexed assay evidence
                                                                                                                                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                Source
                                                                                                                                                                                                GEO
                                                                                                                                                                                                Original indexed metadata
                                                                                                                                                                                                sample_accession: GSM2042475
sample_title: UCA5
source_name: Colon tissue
characteristics: age: 29; gender: Male; location: colon; sample type: active ulcerative colitis

                                                                                                                                                                                                GSM2042476

                                                                                                                                                                                                Uncertain

                                                                                                                                                                                                UCA6

                                                                                                                                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                Requirements and decision evidence
                                                                                                                                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                        • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                          Source metadata
                                                                                                                                                                                                          Source name
                                                                                                                                                                                                          Colon tissue
                                                                                                                                                                                                          Characteristics
                                                                                                                                                                                                          age: 24; gender: Male; location: colon; sample type: active ulcerative colitis
                                                                                                                                                                                                          Description
                                                                                                                                                                                                          Not reported
                                                                                                                                                                                                          Indexed organism evidence
                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                          Indexed assay evidence
                                                                                                                                                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                          Source
                                                                                                                                                                                                          GEO
                                                                                                                                                                                                          Original indexed metadata
                                                                                                                                                                                                          sample_accession: GSM2042476
sample_title: UCA6
source_name: Colon tissue
characteristics: age: 24; gender: Male; location: colon; sample type: active ulcerative colitis

                                                                                                                                                                                                          GSM2042477

                                                                                                                                                                                                          Uncertain

                                                                                                                                                                                                          UCA7

                                                                                                                                                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                          Requirements and decision evidence
                                                                                                                                                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                                  • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                    Source metadata
                                                                                                                                                                                                                    Source name
                                                                                                                                                                                                                    Colon tissue
                                                                                                                                                                                                                    Characteristics
                                                                                                                                                                                                                    age: 45; gender: Female; location: colon; sample type: active ulcerative colitis
                                                                                                                                                                                                                    Description
                                                                                                                                                                                                                    Not reported
                                                                                                                                                                                                                    Indexed organism evidence
                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                    Indexed assay evidence
                                                                                                                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                    Source
                                                                                                                                                                                                                    GEO
                                                                                                                                                                                                                    Original indexed metadata
                                                                                                                                                                                                                    sample_accession: GSM2042477
sample_title: UCA7
source_name: Colon tissue
characteristics: age: 45; gender: Female; location: colon; sample type: active ulcerative colitis

                                                                                                                                                                                                                    GSM2042478

                                                                                                                                                                                                                    Uncertain

                                                                                                                                                                                                                    UCA8

                                                                                                                                                                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                    Requirements and decision evidence
                                                                                                                                                                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                                                            • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                              • Supported by the indexed evidence.
                                                                                                                                                                                                                              Source metadata
                                                                                                                                                                                                                              Source name
                                                                                                                                                                                                                              Colon tissue
                                                                                                                                                                                                                              Characteristics
                                                                                                                                                                                                                              age: 26; gender: Female; location: colon; sample type: active ulcerative colitis
                                                                                                                                                                                                                              Description
                                                                                                                                                                                                                              Not reported
                                                                                                                                                                                                                              Indexed organism evidence
                                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                              Indexed assay evidence
                                                                                                                                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                              Source
                                                                                                                                                                                                                              GEO
                                                                                                                                                                                                                              Original indexed metadata
                                                                                                                                                                                                                              sample_accession: GSM2042478
sample_title: UCA8
source_name: Colon tissue
characteristics: age: 26; gender: Female; location: colon; sample type: active ulcerative colitis

                                                                                                                                                                                                                              GSM2042479

                                                                                                                                                                                                                              Uncertain

                                                                                                                                                                                                                              UCI1

                                                                                                                                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                              Requirements and decision evidence
                                                                                                                                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                                                                      • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                        • Supported by the indexed evidence.
                                                                                                                                                                                                                                        Source metadata
                                                                                                                                                                                                                                        Source name
                                                                                                                                                                                                                                        Colon tissue
                                                                                                                                                                                                                                        Characteristics
                                                                                                                                                                                                                                        age: 31; gender: Male; location: colon; sample type: inactive ulcerative colitis
                                                                                                                                                                                                                                        Description
                                                                                                                                                                                                                                        Not reported
                                                                                                                                                                                                                                        Indexed organism evidence
                                                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                        Indexed assay evidence
                                                                                                                                                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                        Source
                                                                                                                                                                                                                                        GEO
                                                                                                                                                                                                                                        Original indexed metadata
                                                                                                                                                                                                                                        sample_accession: GSM2042479
sample_title: UCI1
source_name: Colon tissue
characteristics: age: 31; gender: Male; location: colon; sample type: inactive ulcerative colitis

                                                                                                                                                                                                                                        GSM2042480

                                                                                                                                                                                                                                        Uncertain

                                                                                                                                                                                                                                        UCI2

                                                                                                                                                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                        Requirements and decision evidence
                                                                                                                                                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                          • The required value is not reported.
                                                                                                                                                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                            • The required value is not reported.
                                                                                                                                                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                • Supported by the indexed evidence.
                                                                                                                                                                                                                                                • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                  • Supported by the indexed evidence.
                                                                                                                                                                                                                                                  Source metadata
                                                                                                                                                                                                                                                  Source name
                                                                                                                                                                                                                                                  Colon tissue
                                                                                                                                                                                                                                                  Characteristics
                                                                                                                                                                                                                                                  age: 71; gender: Female; location: colon; sample type: inactive ulcerative colitis
                                                                                                                                                                                                                                                  Description
                                                                                                                                                                                                                                                  Not reported
                                                                                                                                                                                                                                                  Indexed organism evidence
                                                                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                  Indexed assay evidence
                                                                                                                                                                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                  Source
                                                                                                                                                                                                                                                  GEO
                                                                                                                                                                                                                                                  Original indexed metadata
                                                                                                                                                                                                                                                  sample_accession: GSM2042480
sample_title: UCI2
source_name: Colon tissue
characteristics: age: 71; gender: Female; location: colon; sample type: inactive ulcerative colitis

                                                                                                                                                                                                                                                  GSM2042481

                                                                                                                                                                                                                                                  Uncertain

                                                                                                                                                                                                                                                  UCI3

                                                                                                                                                                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                  Requirements and decision evidence
                                                                                                                                                                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                    • The required value is not reported.
                                                                                                                                                                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                      • The required value is not reported.
                                                                                                                                                                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                        • The required value is not reported.
                                                                                                                                                                                                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                          • Supported by the indexed evidence.
                                                                                                                                                                                                                                                          • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                            • Supported by the indexed evidence.
                                                                                                                                                                                                                                                            Source metadata
                                                                                                                                                                                                                                                            Source name
                                                                                                                                                                                                                                                            Colon tissue
                                                                                                                                                                                                                                                            Characteristics
                                                                                                                                                                                                                                                            age: 51; gender: Male; location: colon; sample type: inactive ulcerative colitis
                                                                                                                                                                                                                                                            Description
                                                                                                                                                                                                                                                            Not reported
                                                                                                                                                                                                                                                            Indexed organism evidence
                                                                                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                            Indexed assay evidence
                                                                                                                                                                                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                            Source
                                                                                                                                                                                                                                                            GEO
                                                                                                                                                                                                                                                            Original indexed metadata
                                                                                                                                                                                                                                                            sample_accession: GSM2042481
sample_title: UCI3
source_name: Colon tissue
characteristics: age: 51; gender: Male; location: colon; sample type: inactive ulcerative colitis

                                                                                                                                                                                                                                                            GSM2042482

                                                                                                                                                                                                                                                            Uncertain

                                                                                                                                                                                                                                                            UCI4

                                                                                                                                                                                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. Study role: Case marker detected.

                                                                                                                                                                                                                                                            Requirements and decision evidence
                                                                                                                                                                                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                                                                                                                                                                                              • The required value is not reported.
                                                                                                                                                                                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                                                                                                                                                                • The required value is not reported.
                                                                                                                                                                                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                                                                                                                                                                  • The required value is not reported.
                                                                                                                                                                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                                                                                                                                                                    • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                    • specimen category excludes: Biofluid — Meets requirement
                                                                                                                                                                                                                                                                      • Supported by the indexed evidence.
                                                                                                                                                                                                                                                                      Source metadata
                                                                                                                                                                                                                                                                      Source name
                                                                                                                                                                                                                                                                      Colon tissue
                                                                                                                                                                                                                                                                      Characteristics
                                                                                                                                                                                                                                                                      age: 33; gender: Female; location: colon; sample type: inactive ulcerative colitis
                                                                                                                                                                                                                                                                      Description
                                                                                                                                                                                                                                                                      Not reported
                                                                                                                                                                                                                                                                      Indexed organism evidence
                                                                                                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                      Indexed assay evidence
                                                                                                                                                                                                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                                                                                                                                                                                                      Source
                                                                                                                                                                                                                                                                      GEO
                                                                                                                                                                                                                                                                      Original indexed metadata
                                                                                                                                                                                                                                                                      sample_accession: GSM2042482
sample_title: UCI4
source_name: Colon tissue
characteristics: age: 33; gender: Female; location: colon; sample type: inactive ulcerative colitis

                                                                                                                                                                                                                                                                      Excluded samples (0)

                                                                                                                                                                                                                                                                      No excluded samples.