Matching samples

GSE87465 · Gene expression profiling of mucosal biopsies from pediatric patients with moderately to severely active ulcerative colitis

Download matching samples CSV
Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

19 case / 0 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

The CSV contains only the confirmed cases and controls below. Excluded and uncertain samples are shown for review and are not exported.

These are sample eligibility decisions from the current indexed metadata. Study-level search filters and minimum sample counts do not establish expression quality or analysis readiness.

Included samples (0)

No samples meet the selected requirements. The CSV contains its column headers only.

Uncertain samples (19)

These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.

GSM2332079

Uncertain

Z343899-23

Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

Requirements and decision evidence
  • organism: Homo sapiens — Insufficient evidence
    • The required value is not reported.
    • assay type: bulk RNA-seq — Insufficient evidence
      • The required value is not reported.
      • specimen category: Tissue or biopsy — Insufficient evidence
        • The required value is not reported.
        • Z343899-23 tissue biopsy subject: 52; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
        • Z343899-23 tissue biopsy subject: 52; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
        • Supported by the indexed evidence.
        • specimen category excludes: Biofluid — Insufficient evidence
          • The required value is not reported.
          • Z343899-23 tissue biopsy subject: 52; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
          • Z343899-23 tissue biopsy subject: 52; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
        Source metadata
        Source name
        tissue biopsy
        Characteristics
        subject: 52; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
        Description
        Not reported
        Indexed organism evidence
        INFERRED · PARENT_INHERITED: Not reported
        Indexed assay evidence
        INFERRED · PARENT_INHERITED: Not reported
        Source
        GEO
        Original indexed metadata
        sample_accession: GSM2332079
sample_title: Z343899-23
source_name: tissue biopsy
characteristics: subject: 52; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon

        GSM2332080

        Uncertain

        J369887-23

        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

        Requirements and decision evidence
        • organism: Homo sapiens — Insufficient evidence
          • The required value is not reported.
          • assay type: bulk RNA-seq — Insufficient evidence
            • The required value is not reported.
            • specimen category: Tissue or biopsy — Insufficient evidence
              • The required value is not reported.
              • J369887-23 tissue biopsy subject: 23; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
              • J369887-23 tissue biopsy subject: 23; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
              • Supported by the indexed evidence.
              • specimen category excludes: Biofluid — Insufficient evidence
                • The required value is not reported.
                • J369887-23 tissue biopsy subject: 23; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
                • J369887-23 tissue biopsy subject: 23; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
              Source metadata
              Source name
              tissue biopsy
              Characteristics
              subject: 23; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
              Description
              Not reported
              Indexed organism evidence
              INFERRED · PARENT_INHERITED: Not reported
              Indexed assay evidence
              INFERRED · PARENT_INHERITED: Not reported
              Source
              GEO
              Original indexed metadata
              sample_accession: GSM2332080
sample_title: J369887-23
source_name: tissue biopsy
characteristics: subject: 23; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon

              GSM2332081

              Uncertain

              W457462-23

              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

              Requirements and decision evidence
              • organism: Homo sapiens — Insufficient evidence
                • The required value is not reported.
                • assay type: bulk RNA-seq — Insufficient evidence
                  • The required value is not reported.
                  • specimen category: Tissue or biopsy — Insufficient evidence
                    • The required value is not reported.
                    • W457462-23 tissue biopsy subject: 39; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                    • W457462-23 tissue biopsy subject: 39; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                    • Supported by the indexed evidence.
                    • specimen category excludes: Biofluid — Insufficient evidence
                      • The required value is not reported.
                      • W457462-23 tissue biopsy subject: 39; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                      • W457462-23 tissue biopsy subject: 39; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                    Source metadata
                    Source name
                    tissue biopsy
                    Characteristics
                    subject: 39; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                    Description
                    Not reported
                    Indexed organism evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Indexed assay evidence
                    INFERRED · PARENT_INHERITED: Not reported
                    Source
                    GEO
                    Original indexed metadata
                    sample_accession: GSM2332081
sample_title: W457462-23
source_name: tissue biopsy
characteristics: subject: 39; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon

                    GSM2332082

                    Uncertain

                    L419087-22

                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                    Requirements and decision evidence
                    • organism: Homo sapiens — Insufficient evidence
                      • The required value is not reported.
                      • assay type: bulk RNA-seq — Insufficient evidence
                        • The required value is not reported.
                        • specimen category: Tissue or biopsy — Insufficient evidence
                          • The required value is not reported.
                          • L419087-22 tissue biopsy subject: 53; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                          • L419087-22 tissue biopsy subject: 53; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                          • Supported by the indexed evidence.
                          • specimen category excludes: Biofluid — Insufficient evidence
                            • The required value is not reported.
                            • L419087-22 tissue biopsy subject: 53; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                            • L419087-22 tissue biopsy subject: 53; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                          Source metadata
                          Source name
                          tissue biopsy
                          Characteristics
                          subject: 53; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                          Description
                          Not reported
                          Indexed organism evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Indexed assay evidence
                          INFERRED · PARENT_INHERITED: Not reported
                          Source
                          GEO
                          Original indexed metadata
                          sample_accession: GSM2332082
sample_title: L419087-22
source_name: tissue biopsy
characteristics: subject: 53; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon

                          GSM2332083

                          Uncertain

                          Y740511-23

                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                          Requirements and decision evidence
                          • organism: Homo sapiens — Insufficient evidence
                            • The required value is not reported.
                            • assay type: bulk RNA-seq — Insufficient evidence
                              • The required value is not reported.
                              • specimen category: Tissue or biopsy — Insufficient evidence
                                • The required value is not reported.
                                • Y740511-23 tissue biopsy subject: 48; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                                • Y740511-23 tissue biopsy subject: 48; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                • Supported by the indexed evidence.
                                • specimen category excludes: Biofluid — Insufficient evidence
                                  • The required value is not reported.
                                  • Y740511-23 tissue biopsy subject: 48; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                                  • Y740511-23 tissue biopsy subject: 48; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                                Source metadata
                                Source name
                                tissue biopsy
                                Characteristics
                                subject: 48; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon
                                Description
                                Not reported
                                Indexed organism evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Indexed assay evidence
                                INFERRED · PARENT_INHERITED: Not reported
                                Source
                                GEO
                                Original indexed metadata
                                sample_accession: GSM2332083
sample_title: Y740511-23
source_name: tissue biopsy
characteristics: subject: 48; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 12; tissue: Colon

                                GSM2332084

                                Uncertain

                                Y200913-23

                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                Requirements and decision evidence
                                • organism: Homo sapiens — Insufficient evidence
                                  • The required value is not reported.
                                  • assay type: bulk RNA-seq — Insufficient evidence
                                    • The required value is not reported.
                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                      • The required value is not reported.
                                      • Y200913-23 tissue biopsy subject: 35; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 10; tissue: Colon
                                      • Y200913-23 tissue biopsy subject: 35; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 10; tissue: Colon
                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                      • Supported by the indexed evidence.
                                      • specimen category excludes: Biofluid — Insufficient evidence
                                        • The required value is not reported.
                                        • Y200913-23 tissue biopsy subject: 35; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 10; tissue: Colon
                                        • Y200913-23 tissue biopsy subject: 35; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 10; tissue: Colon
                                      Source metadata
                                      Source name
                                      tissue biopsy
                                      Characteristics
                                      subject: 35; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 10; tissue: Colon
                                      Description
                                      Not reported
                                      Indexed organism evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Indexed assay evidence
                                      INFERRED · PARENT_INHERITED: Not reported
                                      Source
                                      GEO
                                      Original indexed metadata
                                      sample_accession: GSM2332084
sample_title: Y200913-23
source_name: tissue biopsy
characteristics: subject: 35; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 10; tissue: Colon

                                      GSM2332085

                                      Uncertain

                                      K690175-22

                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                      Requirements and decision evidence
                                      • organism: Homo sapiens — Insufficient evidence
                                        • The required value is not reported.
                                        • assay type: bulk RNA-seq — Insufficient evidence
                                          • The required value is not reported.
                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                            • The required value is not reported.
                                            • K690175-22 tissue biopsy subject: 49; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 6; tissue: Colon
                                            • K690175-22 tissue biopsy subject: 49; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 6; tissue: Colon
                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                            • Supported by the indexed evidence.
                                            • specimen category excludes: Biofluid — Insufficient evidence
                                              • The required value is not reported.
                                              • K690175-22 tissue biopsy subject: 49; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 6; tissue: Colon
                                              • K690175-22 tissue biopsy subject: 49; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 6; tissue: Colon
                                            Source metadata
                                            Source name
                                            tissue biopsy
                                            Characteristics
                                            subject: 49; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 6; tissue: Colon
                                            Description
                                            Not reported
                                            Indexed organism evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Indexed assay evidence
                                            INFERRED · PARENT_INHERITED: Not reported
                                            Source
                                            GEO
                                            Original indexed metadata
                                            sample_accession: GSM2332085
sample_title: K690175-22
source_name: tissue biopsy
characteristics: subject: 49; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 6; tissue: Colon

                                            GSM2332086

                                            Uncertain

                                            X399843-23

                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                            Requirements and decision evidence
                                            • organism: Homo sapiens — Insufficient evidence
                                              • The required value is not reported.
                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                • The required value is not reported.
                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                  • The required value is not reported.
                                                  • X399843-23 tissue biopsy subject: 36; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                  • X399843-23 tissue biopsy subject: 36; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                  • Supported by the indexed evidence.
                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                    • The required value is not reported.
                                                    • X399843-23 tissue biopsy subject: 36; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                    • X399843-23 tissue biopsy subject: 36; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                  Source metadata
                                                  Source name
                                                  tissue biopsy
                                                  Characteristics
                                                  subject: 36; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                  Description
                                                  Not reported
                                                  Indexed organism evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Indexed assay evidence
                                                  INFERRED · PARENT_INHERITED: Not reported
                                                  Source
                                                  GEO
                                                  Original indexed metadata
                                                  sample_accession: GSM2332086
sample_title: X399843-23
source_name: tissue biopsy
characteristics: subject: 36; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon

                                                  GSM2332087

                                                  Uncertain

                                                  W457491-23

                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                  Requirements and decision evidence
                                                  • organism: Homo sapiens — Insufficient evidence
                                                    • The required value is not reported.
                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                      • The required value is not reported.
                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                        • The required value is not reported.
                                                        • W457491-23 tissue biopsy subject: 22; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                        • W457491-23 tissue biopsy subject: 22; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                        • Supported by the indexed evidence.
                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                          • The required value is not reported.
                                                          • W457491-23 tissue biopsy subject: 22; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                          • W457491-23 tissue biopsy subject: 22; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                        Source metadata
                                                        Source name
                                                        tissue biopsy
                                                        Characteristics
                                                        subject: 22; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                        Description
                                                        Not reported
                                                        Indexed organism evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Indexed assay evidence
                                                        INFERRED · PARENT_INHERITED: Not reported
                                                        Source
                                                        GEO
                                                        Original indexed metadata
                                                        sample_accession: GSM2332087
sample_title: W457491-23
source_name: tissue biopsy
characteristics: subject: 22; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon

                                                        GSM2332088

                                                        Uncertain

                                                        Y396214-23

                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                        Requirements and decision evidence
                                                        • organism: Homo sapiens — Insufficient evidence
                                                          • The required value is not reported.
                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                            • The required value is not reported.
                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                              • The required value is not reported.
                                                              • Y396214-23 tissue biopsy subject: 42; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                              • Y396214-23 tissue biopsy subject: 42; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                              • Supported by the indexed evidence.
                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                • The required value is not reported.
                                                                • Y396214-23 tissue biopsy subject: 42; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                • Y396214-23 tissue biopsy subject: 42; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                              Source metadata
                                                              Source name
                                                              tissue biopsy
                                                              Characteristics
                                                              subject: 42; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                              Description
                                                              Not reported
                                                              Indexed organism evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Indexed assay evidence
                                                              INFERRED · PARENT_INHERITED: Not reported
                                                              Source
                                                              GEO
                                                              Original indexed metadata
                                                              sample_accession: GSM2332088
sample_title: Y396214-23
source_name: tissue biopsy
characteristics: subject: 42; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon

                                                              GSM2332089

                                                              Uncertain

                                                              W457483-23

                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                              Requirements and decision evidence
                                                              • organism: Homo sapiens — Insufficient evidence
                                                                • The required value is not reported.
                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                  • The required value is not reported.
                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                    • The required value is not reported.
                                                                    • W457483-23 tissue biopsy subject: 31; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                    • W457483-23 tissue biopsy subject: 31; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                    • Supported by the indexed evidence.
                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • W457483-23 tissue biopsy subject: 31; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                      • W457483-23 tissue biopsy subject: 31; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                    Source metadata
                                                                    Source name
                                                                    tissue biopsy
                                                                    Characteristics
                                                                    subject: 31; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                    Description
                                                                    Not reported
                                                                    Indexed organism evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Indexed assay evidence
                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                    Source
                                                                    GEO
                                                                    Original indexed metadata
                                                                    sample_accession: GSM2332089
sample_title: W457483-23
source_name: tissue biopsy
characteristics: subject: 31; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon

                                                                    GSM2332090

                                                                    Uncertain

                                                                    W457453-23

                                                                    Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                    Requirements and decision evidence
                                                                    • organism: Homo sapiens — Insufficient evidence
                                                                      • The required value is not reported.
                                                                      • assay type: bulk RNA-seq — Insufficient evidence
                                                                        • The required value is not reported.
                                                                        • specimen category: Tissue or biopsy — Insufficient evidence
                                                                          • The required value is not reported.
                                                                          • W457453-23 tissue biopsy subject: 19; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 13; tissue: Colon
                                                                          • W457453-23 tissue biopsy subject: 19; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 13; tissue: Colon
                                                                        • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                          • Supported by the indexed evidence.
                                                                          • specimen category excludes: Biofluid — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • W457453-23 tissue biopsy subject: 19; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 13; tissue: Colon
                                                                            • W457453-23 tissue biopsy subject: 19; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 13; tissue: Colon
                                                                          Source metadata
                                                                          Source name
                                                                          tissue biopsy
                                                                          Characteristics
                                                                          subject: 19; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 13; tissue: Colon
                                                                          Description
                                                                          Not reported
                                                                          Indexed organism evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Indexed assay evidence
                                                                          INFERRED · PARENT_INHERITED: Not reported
                                                                          Source
                                                                          GEO
                                                                          Original indexed metadata
                                                                          sample_accession: GSM2332090
sample_title: W457453-23
source_name: tissue biopsy
characteristics: subject: 19; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 13; tissue: Colon

                                                                          GSM2332091

                                                                          Uncertain

                                                                          K412777-22

                                                                          Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                          Requirements and decision evidence
                                                                          • organism: Homo sapiens — Insufficient evidence
                                                                            • The required value is not reported.
                                                                            • assay type: bulk RNA-seq — Insufficient evidence
                                                                              • The required value is not reported.
                                                                              • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                • The required value is not reported.
                                                                                • K412777-22 tissue biopsy subject: 50; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 11; tissue: Colon
                                                                                • K412777-22 tissue biopsy subject: 50; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 11; tissue: Colon
                                                                              • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                • Supported by the indexed evidence.
                                                                                • specimen category excludes: Biofluid — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • K412777-22 tissue biopsy subject: 50; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 11; tissue: Colon
                                                                                  • K412777-22 tissue biopsy subject: 50; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 11; tissue: Colon
                                                                                Source metadata
                                                                                Source name
                                                                                tissue biopsy
                                                                                Characteristics
                                                                                subject: 50; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 11; tissue: Colon
                                                                                Description
                                                                                Not reported
                                                                                Indexed organism evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Indexed assay evidence
                                                                                INFERRED · PARENT_INHERITED: Not reported
                                                                                Source
                                                                                GEO
                                                                                Original indexed metadata
                                                                                sample_accession: GSM2332091
sample_title: K412777-22
source_name: tissue biopsy
characteristics: subject: 50; diseaseextent: EXTENSIVE; disease: Ulcerative Colitis (UC); age: 11; tissue: Colon

                                                                                GSM2332092

                                                                                Uncertain

                                                                                I769988-23

                                                                                Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                Requirements and decision evidence
                                                                                • organism: Homo sapiens — Insufficient evidence
                                                                                  • The required value is not reported.
                                                                                  • assay type: bulk RNA-seq — Insufficient evidence
                                                                                    • The required value is not reported.
                                                                                    • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                      • The required value is not reported.
                                                                                      • I769988-23 tissue biopsy subject: 37; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 7; tissue: Colon
                                                                                      • I769988-23 tissue biopsy subject: 37; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 7; tissue: Colon
                                                                                    • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                      • Supported by the indexed evidence.
                                                                                      • specimen category excludes: Biofluid — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • I769988-23 tissue biopsy subject: 37; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 7; tissue: Colon
                                                                                        • I769988-23 tissue biopsy subject: 37; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 7; tissue: Colon
                                                                                      Source metadata
                                                                                      Source name
                                                                                      tissue biopsy
                                                                                      Characteristics
                                                                                      subject: 37; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 7; tissue: Colon
                                                                                      Description
                                                                                      Not reported
                                                                                      Indexed organism evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Indexed assay evidence
                                                                                      INFERRED · PARENT_INHERITED: Not reported
                                                                                      Source
                                                                                      GEO
                                                                                      Original indexed metadata
                                                                                      sample_accession: GSM2332092
sample_title: I769988-23
source_name: tissue biopsy
characteristics: subject: 37; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 7; tissue: Colon

                                                                                      GSM2332093

                                                                                      Uncertain

                                                                                      I769929-23

                                                                                      Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                      Requirements and decision evidence
                                                                                      • organism: Homo sapiens — Insufficient evidence
                                                                                        • The required value is not reported.
                                                                                        • assay type: bulk RNA-seq — Insufficient evidence
                                                                                          • The required value is not reported.
                                                                                          • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                            • The required value is not reported.
                                                                                            • I769929-23 tissue biopsy subject: 20; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
                                                                                            • I769929-23 tissue biopsy subject: 20; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
                                                                                          • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                            • Supported by the indexed evidence.
                                                                                            • specimen category excludes: Biofluid — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • I769929-23 tissue biopsy subject: 20; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
                                                                                              • I769929-23 tissue biopsy subject: 20; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
                                                                                            Source metadata
                                                                                            Source name
                                                                                            tissue biopsy
                                                                                            Characteristics
                                                                                            subject: 20; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon
                                                                                            Description
                                                                                            Not reported
                                                                                            Indexed organism evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Indexed assay evidence
                                                                                            INFERRED · PARENT_INHERITED: Not reported
                                                                                            Source
                                                                                            GEO
                                                                                            Original indexed metadata
                                                                                            sample_accession: GSM2332093
sample_title: I769929-23
source_name: tissue biopsy
characteristics: subject: 20; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 9; tissue: Colon

                                                                                            GSM2332094

                                                                                            Uncertain

                                                                                            I769897-23

                                                                                            Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                            Requirements and decision evidence
                                                                                            • organism: Homo sapiens — Insufficient evidence
                                                                                              • The required value is not reported.
                                                                                              • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                • The required value is not reported.
                                                                                                • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                  • The required value is not reported.
                                                                                                  • I769897-23 tissue biopsy subject: 38; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                                                                                                  • I769897-23 tissue biopsy subject: 38; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                                                                                                • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                  • Supported by the indexed evidence.
                                                                                                  • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • I769897-23 tissue biopsy subject: 38; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                                                                                                    • I769897-23 tissue biopsy subject: 38; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                                                                                                  Source metadata
                                                                                                  Source name
                                                                                                  tissue biopsy
                                                                                                  Characteristics
                                                                                                  subject: 38; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon
                                                                                                  Description
                                                                                                  Not reported
                                                                                                  Indexed organism evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Indexed assay evidence
                                                                                                  INFERRED · PARENT_INHERITED: Not reported
                                                                                                  Source
                                                                                                  GEO
                                                                                                  Original indexed metadata
                                                                                                  sample_accession: GSM2332094
sample_title: I769897-23
source_name: tissue biopsy
characteristics: subject: 38; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 17; tissue: Colon

                                                                                                  GSM2332095

                                                                                                  Uncertain

                                                                                                  I771787-23

                                                                                                  Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                  Requirements and decision evidence
                                                                                                  • organism: Homo sapiens — Insufficient evidence
                                                                                                    • The required value is not reported.
                                                                                                    • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                      • The required value is not reported.
                                                                                                      • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                        • The required value is not reported.
                                                                                                        • I771787-23 tissue biopsy subject: 18; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                                                                        • I771787-23 tissue biopsy subject: 18; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                                                                      • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                        • Supported by the indexed evidence.
                                                                                                        • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • I771787-23 tissue biopsy subject: 18; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                                                                          • I771787-23 tissue biopsy subject: 18; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                                                                        Source metadata
                                                                                                        Source name
                                                                                                        tissue biopsy
                                                                                                        Characteristics
                                                                                                        subject: 18; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon
                                                                                                        Description
                                                                                                        Not reported
                                                                                                        Indexed organism evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Indexed assay evidence
                                                                                                        INFERRED · PARENT_INHERITED: Not reported
                                                                                                        Source
                                                                                                        GEO
                                                                                                        Original indexed metadata
                                                                                                        sample_accession: GSM2332095
sample_title: I771787-23
source_name: tissue biopsy
characteristics: subject: 18; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 16; tissue: Colon

                                                                                                        GSM2332096

                                                                                                        Uncertain

                                                                                                        Y396209-23

                                                                                                        Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                        Requirements and decision evidence
                                                                                                        • organism: Homo sapiens — Insufficient evidence
                                                                                                          • The required value is not reported.
                                                                                                          • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                            • The required value is not reported.
                                                                                                            • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                              • The required value is not reported.
                                                                                                              • Y396209-23 tissue biopsy subject: 51; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                              • Y396209-23 tissue biopsy subject: 51; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                            • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                              • Supported by the indexed evidence.
                                                                                                              • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • Y396209-23 tissue biopsy subject: 51; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                                • Y396209-23 tissue biopsy subject: 51; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                              Source metadata
                                                                                                              Source name
                                                                                                              tissue biopsy
                                                                                                              Characteristics
                                                                                                              subject: 51; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                              Description
                                                                                                              Not reported
                                                                                                              Indexed organism evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Indexed assay evidence
                                                                                                              INFERRED · PARENT_INHERITED: Not reported
                                                                                                              Source
                                                                                                              GEO
                                                                                                              Original indexed metadata
                                                                                                              sample_accession: GSM2332096
sample_title: Y396209-23
source_name: tissue biopsy
characteristics: subject: 51; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon

                                                                                                              GSM2332097

                                                                                                              Uncertain

                                                                                                              Z094865-23

                                                                                                              Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Case marker detected.

                                                                                                              Requirements and decision evidence
                                                                                                              • organism: Homo sapiens — Insufficient evidence
                                                                                                                • The required value is not reported.
                                                                                                                • assay type: bulk RNA-seq — Insufficient evidence
                                                                                                                  • The required value is not reported.
                                                                                                                  • specimen category: Tissue or biopsy — Insufficient evidence
                                                                                                                    • The required value is not reported.
                                                                                                                    • Z094865-23 tissue biopsy subject: 56; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                                    • Z094865-23 tissue biopsy subject: 56; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                                  • excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
                                                                                                                    • Supported by the indexed evidence.
                                                                                                                    • specimen category excludes: Biofluid — Insufficient evidence
                                                                                                                      • The required value is not reported.
                                                                                                                      • Z094865-23 tissue biopsy subject: 56; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                                      • Z094865-23 tissue biopsy subject: 56; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                                    Source metadata
                                                                                                                    Source name
                                                                                                                    tissue biopsy
                                                                                                                    Characteristics
                                                                                                                    subject: 56; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon
                                                                                                                    Description
                                                                                                                    Not reported
                                                                                                                    Indexed organism evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Indexed assay evidence
                                                                                                                    INFERRED · PARENT_INHERITED: Not reported
                                                                                                                    Source
                                                                                                                    GEO
                                                                                                                    Original indexed metadata
                                                                                                                    sample_accession: GSM2332097
sample_title: Z094865-23
source_name: tissue biopsy
characteristics: subject: 56; diseaseextent: LIMITED UC; disease: Ulcerative Colitis (UC); age: 15; tissue: Colon

                                                                                                                    Excluded samples (0)

                                                                                                                    No excluded samples.