These samples need more evidence before they can be counted. This includes samples without a confirmed case/control role.
T17p1_A8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A8 tissue biopsy tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_A8 tissue biopsy tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A8 tissue biopsy tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_A8 tissue biopsy tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429346
sample_title: T17p1_A8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
T17p2_F4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F4 tissue biopsy tissue: colon mucosa; subject: 7783-00005; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_F4 tissue biopsy tissue: colon mucosa; subject: 7783-00005; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F4 tissue biopsy tissue: colon mucosa; subject: 7783-00005; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_F4 tissue biopsy tissue: colon mucosa; subject: 7783-00005; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7783-00005; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429347
sample_title: T17p2_F4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7783-00005; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
T17p1_A11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A11 tissue biopsy tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_A11 tissue biopsy tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A11 tissue biopsy tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_A11 tissue biopsy tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429348
sample_title: T17p1_A11
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
T17p2_B8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B8 tissue biopsy tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_B8 tissue biopsy tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B8 tissue biopsy tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_B8 tissue biopsy tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429349
sample_title: T17p2_B8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p2_B7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B7 tissue biopsy tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_B7 tissue biopsy tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B7 tissue biopsy tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_B7 tissue biopsy tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429350
sample_title: T17p2_B7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p2_C1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C1 tissue biopsy tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
- T17p2_C1 tissue biopsy tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C1 tissue biopsy tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
- T17p2_C1 tissue biopsy tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429351
sample_title: T17p2_C1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
T17p1_D4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D4 tissue biopsy tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
- T17p1_D4 tissue biopsy tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D4 tissue biopsy tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
- T17p1_D4 tissue biopsy tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429352
sample_title: T17p1_D4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 11
T17p1_C8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C8 tissue biopsy tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_C8 tissue biopsy tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C8 tissue biopsy tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_C8 tissue biopsy tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429353
sample_title: T17p1_C8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
T17p2_A4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A4 tissue biopsy tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p2_A4 tissue biopsy tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A4 tissue biopsy tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p2_A4 tissue biopsy tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429354
sample_title: T17p2_A4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
T17p2_A7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A7 tissue biopsy tissue: colon mucosa; subject: 7785-00003; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- T17p2_A7 tissue biopsy tissue: colon mucosa; subject: 7785-00003; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A7 tissue biopsy tissue: colon mucosa; subject: 7785-00003; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- T17p2_A7 tissue biopsy tissue: colon mucosa; subject: 7785-00003; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7785-00003; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429355
sample_title: T17p2_A7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7785-00003; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
T17p1_E10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E10 tissue biopsy tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_E10 tissue biopsy tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E10 tissue biopsy tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_E10 tissue biopsy tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429356
sample_title: T17p1_E10
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
T17p1_H4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H4 tissue biopsy tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_H4 tissue biopsy tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H4 tissue biopsy tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_H4 tissue biopsy tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429357
sample_title: T17p1_H4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
T17p2_B5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B5 tissue biopsy tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 6
- T17p2_B5 tissue biopsy tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B5 tissue biopsy tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 6
- T17p2_B5 tissue biopsy tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429358
sample_title: T17p2_B5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 6
T17p2_H4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_H4 tissue biopsy tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_H4 tissue biopsy tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_H4 tissue biopsy tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_H4 tissue biopsy tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429359
sample_title: T17p2_H4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p1_G1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G1 tissue biopsy tissue: colon mucosa; subject: 7207-00021; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p1_G1 tissue biopsy tissue: colon mucosa; subject: 7207-00021; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G1 tissue biopsy tissue: colon mucosa; subject: 7207-00021; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p1_G1 tissue biopsy tissue: colon mucosa; subject: 7207-00021; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7207-00021; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429360
sample_title: T17p1_G1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7207-00021; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p1_A10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A10 tissue biopsy tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_A10 tissue biopsy tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A10 tissue biopsy tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_A10 tissue biopsy tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429361
sample_title: T17p1_A10
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
T17p1_B2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B2 tissue biopsy tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p1_B2 tissue biopsy tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B2 tissue biopsy tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p1_B2 tissue biopsy tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429362
sample_title: T17p1_B2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
T17p1_F2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F2 tissue biopsy tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_F2 tissue biopsy tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F2 tissue biopsy tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_F2 tissue biopsy tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429363
sample_title: T17p1_F2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
T17p2_C3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C3 tissue biopsy tissue: colon mucosa; subject: 7781-00003; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- T17p2_C3 tissue biopsy tissue: colon mucosa; subject: 7781-00003; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C3 tissue biopsy tissue: colon mucosa; subject: 7781-00003; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- T17p2_C3 tissue biopsy tissue: colon mucosa; subject: 7781-00003; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7781-00003; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429364
sample_title: T17p2_C3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7781-00003; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
T17p1_A4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A4 tissue biopsy tissue: colon mucosa; subject: 6177-00015; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_A4 tissue biopsy tissue: colon mucosa; subject: 6177-00015; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A4 tissue biopsy tissue: colon mucosa; subject: 6177-00015; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_A4 tissue biopsy tissue: colon mucosa; subject: 6177-00015; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6177-00015; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429365
sample_title: T17p1_A4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6177-00015; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
T17p2_G3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_G3 tissue biopsy tissue: colon mucosa; subject: 7753-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p2_G3 tissue biopsy tissue: colon mucosa; subject: 7753-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_G3 tissue biopsy tissue: colon mucosa; subject: 7753-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p2_G3 tissue biopsy tissue: colon mucosa; subject: 7753-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7753-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429366
sample_title: T17p2_G3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7753-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
T17p2_G1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_G1 tissue biopsy tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p2_G1 tissue biopsy tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_G1 tissue biopsy tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p2_G1 tissue biopsy tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429367
sample_title: T17p2_G1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
T17p1_E6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E6 tissue biopsy tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_E6 tissue biopsy tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E6 tissue biopsy tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_E6 tissue biopsy tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429368
sample_title: T17p1_E6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
T17p2_E1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_E1 tissue biopsy tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_E1 tissue biopsy tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_E1 tissue biopsy tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_E1 tissue biopsy tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429369
sample_title: T17p2_E1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p1_D5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D5 tissue biopsy tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_D5 tissue biopsy tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D5 tissue biopsy tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_D5 tissue biopsy tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429370
sample_title: T17p1_D5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 9
T17p2_A6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A6 tissue biopsy tissue: colon mucosa; subject: 7414-00020; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
- T17p2_A6 tissue biopsy tissue: colon mucosa; subject: 7414-00020; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A6 tissue biopsy tissue: colon mucosa; subject: 7414-00020; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
- T17p2_A6 tissue biopsy tissue: colon mucosa; subject: 7414-00020; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7414-00020; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429371
sample_title: T17p2_A6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7414-00020; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
T17p1_B1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B1 tissue biopsy tissue: colon mucosa; subject: 6502-00022; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_B1 tissue biopsy tissue: colon mucosa; subject: 6502-00022; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B1 tissue biopsy tissue: colon mucosa; subject: 6502-00022; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_B1 tissue biopsy tissue: colon mucosa; subject: 6502-00022; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6502-00022; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429372
sample_title: T17p1_B1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6502-00022; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
T17p2_A1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A1 tissue biopsy tissue: colon mucosa; subject: 7785-00001; disease: Ulcerative Colitis (UC); age: 29; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- T17p2_A1 tissue biopsy tissue: colon mucosa; subject: 7785-00001; disease: Ulcerative Colitis (UC); age: 29; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A1 tissue biopsy tissue: colon mucosa; subject: 7785-00001; disease: Ulcerative Colitis (UC); age: 29; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- T17p2_A1 tissue biopsy tissue: colon mucosa; subject: 7785-00001; disease: Ulcerative Colitis (UC); age: 29; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7785-00001; disease: Ulcerative Colitis (UC); age: 29; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429373
sample_title: T17p2_A1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7785-00001; disease: Ulcerative Colitis (UC); age: 29; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 11
T17p2_B1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B1 tissue biopsy tissue: colon mucosa; subject: 7787-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_B1 tissue biopsy tissue: colon mucosa; subject: 7787-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B1 tissue biopsy tissue: colon mucosa; subject: 7787-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_B1 tissue biopsy tissue: colon mucosa; subject: 7787-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7787-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429374
sample_title: T17p2_B1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7787-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p1_C10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C10 tissue biopsy tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_C10 tissue biopsy tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C10 tissue biopsy tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_C10 tissue biopsy tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429375
sample_title: T17p1_C10
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
T17p1_C3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C3 tissue biopsy tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p1_C3 tissue biopsy tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C3 tissue biopsy tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p1_C3 tissue biopsy tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429376
sample_title: T17p1_C3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
T17p2_B6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B6 tissue biopsy tissue: colon mucosa; subject: 7416-00009; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_B6 tissue biopsy tissue: colon mucosa; subject: 7416-00009; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B6 tissue biopsy tissue: colon mucosa; subject: 7416-00009; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_B6 tissue biopsy tissue: colon mucosa; subject: 7416-00009; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7416-00009; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429377
sample_title: T17p2_B6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7416-00009; disease: Ulcerative Colitis (UC); age: 34; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p1_C7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C7 tissue biopsy tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_C7 tissue biopsy tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C7 tissue biopsy tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_C7 tissue biopsy tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429378
sample_title: T17p1_C7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
T17p2_G5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_G5 tissue biopsy tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_G5 tissue biopsy tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_G5 tissue biopsy tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p2_G5 tissue biopsy tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429379
sample_title: T17p2_G5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p2_F6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F6 tissue biopsy tissue: colon mucosa; subject: 7601-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p2_F6 tissue biopsy tissue: colon mucosa; subject: 7601-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F6 tissue biopsy tissue: colon mucosa; subject: 7601-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p2_F6 tissue biopsy tissue: colon mucosa; subject: 7601-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7601-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429380
sample_title: T17p2_F6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7601-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
T17p1_G3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G3 tissue biopsy tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_G3 tissue biopsy tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G3 tissue biopsy tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_G3 tissue biopsy tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429381
sample_title: T17p1_G3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
T17p2_F7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F7 tissue biopsy tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_F7 tissue biopsy tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F7 tissue biopsy tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_F7 tissue biopsy tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429382
sample_title: T17p2_F7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
T17p1_A12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A12 tissue biopsy tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_A12 tissue biopsy tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A12 tissue biopsy tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_A12 tissue biopsy tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429383
sample_title: T17p1_A12
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
T17p1_G9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G9 tissue biopsy tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
- T17p1_G9 tissue biopsy tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G9 tissue biopsy tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
- T17p1_G9 tissue biopsy tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429384
sample_title: T17p1_G9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 12
T17p1_B5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B5 tissue biopsy tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p1_B5 tissue biopsy tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B5 tissue biopsy tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p1_B5 tissue biopsy tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429385
sample_title: T17p1_B5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p1_E7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E7 tissue biopsy tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_E7 tissue biopsy tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E7 tissue biopsy tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_E7 tissue biopsy tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429386
sample_title: T17p1_E7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
T17p2_D3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D3 tissue biopsy tissue: colon mucosa; subject: 7785-00002; disease: Ulcerative Colitis (UC); age: 64; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p2_D3 tissue biopsy tissue: colon mucosa; subject: 7785-00002; disease: Ulcerative Colitis (UC); age: 64; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D3 tissue biopsy tissue: colon mucosa; subject: 7785-00002; disease: Ulcerative Colitis (UC); age: 64; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- T17p2_D3 tissue biopsy tissue: colon mucosa; subject: 7785-00002; disease: Ulcerative Colitis (UC); age: 64; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7785-00002; disease: Ulcerative Colitis (UC); age: 64; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429387
sample_title: T17p2_D3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7785-00002; disease: Ulcerative Colitis (UC); age: 64; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 10
T17p2_H7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_H7 tissue biopsy tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- T17p2_H7 tissue biopsy tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_H7 tissue biopsy tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- T17p2_H7 tissue biopsy tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429388
sample_title: T17p2_H7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 7
T17p1_E12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E12 tissue biopsy tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p1_E12 tissue biopsy tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E12 tissue biopsy tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- T17p1_E12 tissue biopsy tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429389
sample_title: T17p1_E12
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: No; mayo score: 8
T17p2_C6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C6 tissue biopsy tissue: colon mucosa; subject: 7601-00001; disease: Ulcerative Colitis (UC); age: 59; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p2_C6 tissue biopsy tissue: colon mucosa; subject: 7601-00001; disease: Ulcerative Colitis (UC); age: 59; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C6 tissue biopsy tissue: colon mucosa; subject: 7601-00001; disease: Ulcerative Colitis (UC); age: 59; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p2_C6 tissue biopsy tissue: colon mucosa; subject: 7601-00001; disease: Ulcerative Colitis (UC); age: 59; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7601-00001; disease: Ulcerative Colitis (UC); age: 59; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429390
sample_title: T17p2_C6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7601-00001; disease: Ulcerative Colitis (UC); age: 59; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
T17p2_A2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A2 tissue biopsy tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p2_A2 tissue biopsy tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A2 tissue biopsy tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p2_A2 tissue biopsy tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429391
sample_title: T17p2_A2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
T17p1_E3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E3 tissue biopsy tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_E3 tissue biopsy tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E3 tissue biopsy tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_E3 tissue biopsy tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429392
sample_title: T17p1_E3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
T17p1_H1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H1 tissue biopsy tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_H1 tissue biopsy tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H1 tissue biopsy tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_H1 tissue biopsy tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429393
sample_title: T17p1_H1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
T17p2_H8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_H8 tissue biopsy tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_H8 tissue biopsy tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_H8 tissue biopsy tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_H8 tissue biopsy tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429394
sample_title: T17p2_H8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
T17p2_D7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D7 tissue biopsy tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p2_D7 tissue biopsy tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D7 tissue biopsy tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p2_D7 tissue biopsy tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429395
sample_title: T17p2_D7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
T17p2_D9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D9 tissue biopsy tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p2_D9 tissue biopsy tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D9 tissue biopsy tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p2_D9 tissue biopsy tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429396
sample_title: T17p2_D9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
T17p2_C5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C5 tissue biopsy tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_C5 tissue biopsy tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C5 tissue biopsy tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_C5 tissue biopsy tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429397
sample_title: T17p2_C5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
T17p1_C12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C12 tissue biopsy tissue: colon mucosa; subject: 7746-00009; disease: Ulcerative Colitis (UC); age: 19; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_C12 tissue biopsy tissue: colon mucosa; subject: 7746-00009; disease: Ulcerative Colitis (UC); age: 19; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C12 tissue biopsy tissue: colon mucosa; subject: 7746-00009; disease: Ulcerative Colitis (UC); age: 19; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_C12 tissue biopsy tissue: colon mucosa; subject: 7746-00009; disease: Ulcerative Colitis (UC); age: 19; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7746-00009; disease: Ulcerative Colitis (UC); age: 19; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429398
sample_title: T17p1_C12
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7746-00009; disease: Ulcerative Colitis (UC); age: 19; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
T17p1_F5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F5 tissue biopsy tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_F5 tissue biopsy tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F5 tissue biopsy tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_F5 tissue biopsy tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429399
sample_title: T17p1_F5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 6
T17p2_D8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D8 tissue biopsy tissue: colon mucosa; subject: 7601-00005; disease: Ulcerative Colitis (UC); age: 31; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p2_D8 tissue biopsy tissue: colon mucosa; subject: 7601-00005; disease: Ulcerative Colitis (UC); age: 31; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D8 tissue biopsy tissue: colon mucosa; subject: 7601-00005; disease: Ulcerative Colitis (UC); age: 31; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p2_D8 tissue biopsy tissue: colon mucosa; subject: 7601-00005; disease: Ulcerative Colitis (UC); age: 31; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7601-00005; disease: Ulcerative Colitis (UC); age: 31; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429400
sample_title: T17p2_D8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7601-00005; disease: Ulcerative Colitis (UC); age: 31; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 10
T17p2_B9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B9 tissue biopsy tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_B9 tissue biopsy tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B9 tissue biopsy tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_B9 tissue biopsy tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429401
sample_title: T17p2_B9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 7
T17p1_F11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F11 tissue biopsy tissue: colon mucosa; subject: 7502-00003; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_F11 tissue biopsy tissue: colon mucosa; subject: 7502-00003; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F11 tissue biopsy tissue: colon mucosa; subject: 7502-00003; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_F11 tissue biopsy tissue: colon mucosa; subject: 7502-00003; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7502-00003; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429402
sample_title: T17p1_F11
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7502-00003; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
T17p1_D11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D11 tissue biopsy tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p1_D11 tissue biopsy tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D11 tissue biopsy tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p1_D11 tissue biopsy tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429403
sample_title: T17p1_D11
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 8
T17p1_B9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B9 tissue biopsy tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_B9 tissue biopsy tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B9 tissue biopsy tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p1_B9 tissue biopsy tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429404
sample_title: T17p1_B9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 0; wk6response: Yes; mayo score: 9
T17p2_C7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C7 tissue biopsy tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
- T17p2_C7 tissue biopsy tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C7 tissue biopsy tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
- T17p2_C7 tissue biopsy tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429405
sample_title: T17p2_C7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7602-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
T17p1_A5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A5 tissue biopsy tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p1_A5 tissue biopsy tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A5 tissue biopsy tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p1_A5 tissue biopsy tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429406
sample_title: T17p1_A5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6402-00007; disease: Ulcerative Colitis (UC); age: 49; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
T17p1_B10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B10 tissue biopsy tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p1_B10 tissue biopsy tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B10 tissue biopsy tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p1_B10 tissue biopsy tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429407
sample_title: T17p1_B10
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00030; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
T17p2_D1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D1 tissue biopsy tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p2_D1 tissue biopsy tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D1 tissue biopsy tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p2_D1 tissue biopsy tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429408
sample_title: T17p2_D1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7414-00018; disease: Ulcerative Colitis (UC); age: 28; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
T17p1_H10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H10 tissue biopsy tissue: colon mucosa; subject: 6502-00027; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_H10 tissue biopsy tissue: colon mucosa; subject: 6502-00027; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H10 tissue biopsy tissue: colon mucosa; subject: 6502-00027; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_H10 tissue biopsy tissue: colon mucosa; subject: 6502-00027; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6502-00027; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429409
sample_title: T17p1_H10
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6502-00027; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
T17p1_D7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D7 tissue biopsy tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- T17p1_D7 tissue biopsy tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D7 tissue biopsy tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- T17p1_D7 tissue biopsy tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429410
sample_title: T17p1_D7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7026-00028; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
T17p1_F1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F1 tissue biopsy tissue: colon mucosa; subject: 6502-00024; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_F1 tissue biopsy tissue: colon mucosa; subject: 6502-00024; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F1 tissue biopsy tissue: colon mucosa; subject: 6502-00024; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_F1 tissue biopsy tissue: colon mucosa; subject: 6502-00024; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6502-00024; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429411
sample_title: T17p1_F1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6502-00024; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
T17p1_G10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G10 tissue biopsy tissue: colon mucosa; subject: 6502-00026; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p1_G10 tissue biopsy tissue: colon mucosa; subject: 6502-00026; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G10 tissue biopsy tissue: colon mucosa; subject: 6502-00026; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p1_G10 tissue biopsy tissue: colon mucosa; subject: 6502-00026; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6502-00026; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429412
sample_title: T17p1_G10
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6502-00026; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
T17p1_B8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B8 tissue biopsy tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- T17p1_B8 tissue biopsy tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B8 tissue biopsy tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- T17p1_B8 tissue biopsy tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429413
sample_title: T17p1_B8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6402-00008; disease: Ulcerative Colitis (UC); age: 77; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
T17p1_D8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D8 tissue biopsy tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_D8 tissue biopsy tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D8 tissue biopsy tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_D8 tissue biopsy tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429414
sample_title: T17p1_D8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00026; disease: Ulcerative Colitis (UC); age: 51; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
T17p1_H3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H3 tissue biopsy tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- T17p1_H3 tissue biopsy tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H3 tissue biopsy tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- T17p1_H3 tissue biopsy tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429415
sample_title: T17p1_H3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7354-00009; disease: Ulcerative Colitis (UC); age: 44; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
T17p2_G7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_G7 tissue biopsy tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p2_G7 tissue biopsy tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_G7 tissue biopsy tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p2_G7 tissue biopsy tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429416
sample_title: T17p2_G7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00002; disease: Ulcerative Colitis (UC); age: 54; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
T17p1_D1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D1 tissue biopsy tissue: colon mucosa; subject: 6502-00023; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
- T17p1_D1 tissue biopsy tissue: colon mucosa; subject: 6502-00023; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D1 tissue biopsy tissue: colon mucosa; subject: 6502-00023; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
- T17p1_D1 tissue biopsy tissue: colon mucosa; subject: 6502-00023; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6502-00023; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429417
sample_title: T17p1_D1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6502-00023; disease: Ulcerative Colitis (UC); age: 23; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
T17p2_H1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_H1 tissue biopsy tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- T17p2_H1 tissue biopsy tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_H1 tissue biopsy tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- T17p2_H1 tissue biopsy tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429418
sample_title: T17p2_H1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7414-00019; disease: Ulcerative Colitis (UC); age: 24; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
T17p1_B11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B11 tissue biopsy tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- T17p1_B11 tissue biopsy tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B11 tissue biopsy tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- T17p1_B11 tissue biopsy tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429419
sample_title: T17p1_B11
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6502-00028; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
T17p2_A5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A5 tissue biopsy tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p2_A5 tissue biopsy tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A5 tissue biopsy tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p2_A5 tissue biopsy tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429420
sample_title: T17p2_A5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00011; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
T17p2_B4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B4 tissue biopsy tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
- T17p2_B4 tissue biopsy tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B4 tissue biopsy tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
- T17p2_B4 tissue biopsy tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429421
sample_title: T17p2_B4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7756-00011; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 7
T17p1_D9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D9 tissue biopsy tissue: colon mucosa; subject: 6404-00027; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_D9 tissue biopsy tissue: colon mucosa; subject: 6404-00027; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D9 tissue biopsy tissue: colon mucosa; subject: 6404-00027; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_D9 tissue biopsy tissue: colon mucosa; subject: 6404-00027; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00027; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429422
sample_title: T17p1_D9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00027; disease: Ulcerative Colitis (UC); age: 30; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
T17p2_H5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_H5 tissue biopsy tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p2_H5 tissue biopsy tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_H5 tissue biopsy tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p2_H5 tissue biopsy tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429423
sample_title: T17p2_H5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7528-00001; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
T17p2_F1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F1 tissue biopsy tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p2_F1 tissue biopsy tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F1 tissue biopsy tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p2_F1 tissue biopsy tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429424
sample_title: T17p2_F1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00002; disease: Ulcerative Colitis (UC); age: 57; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
T17p1_F7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F7 tissue biopsy tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- T17p1_F7 tissue biopsy tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F7 tissue biopsy tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- T17p1_F7 tissue biopsy tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429425
sample_title: T17p1_F7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6179-00009; disease: Ulcerative Colitis (UC); age: 32; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
T17p1_E4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E4 tissue biopsy tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p1_E4 tissue biopsy tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E4 tissue biopsy tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p1_E4 tissue biopsy tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429426
sample_title: T17p1_E4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6705-00016; disease: Ulcerative Colitis (UC); age: 50; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 6
T17p2_A8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A8 tissue biopsy tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p2_A8 tissue biopsy tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A8 tissue biopsy tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p2_A8 tissue biopsy tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429427
sample_title: T17p2_A8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7790-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
T17p1_E5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E5 tissue biopsy tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
- T17p1_E5 tissue biopsy tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E5 tissue biopsy tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
- T17p1_E5 tissue biopsy tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429428
sample_title: T17p1_E5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6705-00018; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
T17p1_F6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F6 tissue biopsy tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_F6 tissue biopsy tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F6 tissue biopsy tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_F6 tissue biopsy tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429429
sample_title: T17p1_F6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7213-00010; disease: Ulcerative Colitis (UC); age: 52; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
T17p1_A1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A1 tissue biopsy tissue: colon mucosa; subject: 7213-00005; disease: Ulcerative Colitis (UC); age: 35; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p1_A1 tissue biopsy tissue: colon mucosa; subject: 7213-00005; disease: Ulcerative Colitis (UC); age: 35; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A1 tissue biopsy tissue: colon mucosa; subject: 7213-00005; disease: Ulcerative Colitis (UC); age: 35; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- T17p1_A1 tissue biopsy tissue: colon mucosa; subject: 7213-00005; disease: Ulcerative Colitis (UC); age: 35; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7213-00005; disease: Ulcerative Colitis (UC); age: 35; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429430
sample_title: T17p1_A1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7213-00005; disease: Ulcerative Colitis (UC); age: 35; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 7
T17p1_C1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C1 tissue biopsy tissue: colon mucosa; subject: 7213-00006; disease: Ulcerative Colitis (UC); age: 58; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- T17p1_C1 tissue biopsy tissue: colon mucosa; subject: 7213-00006; disease: Ulcerative Colitis (UC); age: 58; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C1 tissue biopsy tissue: colon mucosa; subject: 7213-00006; disease: Ulcerative Colitis (UC); age: 58; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- T17p1_C1 tissue biopsy tissue: colon mucosa; subject: 7213-00006; disease: Ulcerative Colitis (UC); age: 58; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7213-00006; disease: Ulcerative Colitis (UC); age: 58; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429431
sample_title: T17p1_C1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7213-00006; disease: Ulcerative Colitis (UC); age: 58; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 5
T17p1_F12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F12 tissue biopsy tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_F12 tissue biopsy tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F12 tissue biopsy tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_F12 tissue biopsy tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429432
sample_title: T17p1_F12
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7746-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
T17p1_C2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C2 tissue biopsy tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- T17p1_C2 tissue biopsy tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C2 tissue biopsy tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- T17p1_C2 tissue biopsy tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429433
sample_title: T17p1_C2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00017; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
T17p2_C4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C4 tissue biopsy tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
- T17p2_C4 tissue biopsy tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C4 tissue biopsy tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
- T17p2_C4 tissue biopsy tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429434
sample_title: T17p2_C4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00008; disease: Ulcerative Colitis (UC); age: 56; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 4
T17p2_C8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C8 tissue biopsy tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
- T17p2_C8 tissue biopsy tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C8 tissue biopsy tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
- T17p2_C8 tissue biopsy tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429435
sample_title: T17p2_C8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7796-00003; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 6
T17p1_D3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D3 tissue biopsy tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_D3 tissue biopsy tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D3 tissue biopsy tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_D3 tissue biopsy tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429436
sample_title: T17p1_D3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7179-00002; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 3
T17p1_C5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C5 tissue biopsy tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_C5 tissue biopsy tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C5 tissue biopsy tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_C5 tissue biopsy tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429437
sample_title: T17p1_C5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6705-00017; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
T17p1_D10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D10 tissue biopsy tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- T17p1_D10 tissue biopsy tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D10 tissue biopsy tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- T17p1_D10 tissue biopsy tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429438
sample_title: T17p1_D10
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00031; disease: Ulcerative Colitis (UC); age: 46; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 4
T17p1_F10
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F10 tissue biopsy tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_F10 tissue biopsy tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F10 tissue biopsy tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_F10 tissue biopsy tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429439
sample_title: T17p1_F10
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7204-00011; disease: Ulcerative Colitis (UC); age: 38; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
T17p1_G2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G2 tissue biopsy tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_G2 tissue biopsy tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G2 tissue biopsy tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_G2 tissue biopsy tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429440
sample_title: T17p1_G2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7213-00008; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 9
T17p1_B12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B12 tissue biopsy tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_B12 tissue biopsy tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B12 tissue biopsy tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_B12 tissue biopsy tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429441
sample_title: T17p1_B12
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7783-00003; disease: Ulcerative Colitis (UC); age: 71; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 8
T17p1_H9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H9 tissue biopsy tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- T17p1_H9 tissue biopsy tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H9 tissue biopsy tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- T17p1_H9 tissue biopsy tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429442
sample_title: T17p1_H9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7204-00013; disease: Ulcerative Colitis (UC); age: 39; treatment: golimumab; visit: Week 6; wk6response: No; mayo score: 10
T17p2_A9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A9 tissue biopsy tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p2_A9 tissue biopsy tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A9 tissue biopsy tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p2_A9 tissue biopsy tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429443
sample_title: T17p2_A9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00004; disease: Ulcerative Colitis (UC); age: 45; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
T17p2_B2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B2 tissue biopsy tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- T17p2_B2 tissue biopsy tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B2 tissue biopsy tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- T17p2_B2 tissue biopsy tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429444
sample_title: T17p2_B2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
T17p1_G5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G5 tissue biopsy tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p1_G5 tissue biopsy tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G5 tissue biopsy tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p1_G5 tissue biopsy tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429445
sample_title: T17p1_G5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00021; disease: Ulcerative Colitis (UC); age: 63; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
T17p2_C9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C9 tissue biopsy tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p2_C9 tissue biopsy tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C9 tissue biopsy tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p2_C9 tissue biopsy tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429446
sample_title: T17p2_C9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00006; disease: Ulcerative Colitis (UC); age: 40; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
T17p2_D5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D5 tissue biopsy tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- T17p2_D5 tissue biopsy tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D5 tissue biopsy tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- T17p2_D5 tissue biopsy tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429447
sample_title: T17p2_D5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00009; disease: Ulcerative Colitis (UC); age: 33; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
T17p2_E9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_E9 tissue biopsy tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p2_E9 tissue biopsy tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_E9 tissue biopsy tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p2_E9 tissue biopsy tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429448
sample_title: T17p2_E9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00005; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
T17p1_A2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A2 tissue biopsy tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p1_A2 tissue biopsy tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A2 tissue biopsy tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p1_A2 tissue biopsy tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429449
sample_title: T17p1_A2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6716-00010; disease: Ulcerative Colitis (UC); age: 69; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 1
T17p1_F3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F3 tissue biopsy tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p1_F3 tissue biopsy tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F3 tissue biopsy tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p1_F3 tissue biopsy tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429450
sample_title: T17p1_F3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6501-00019; disease: Ulcerative Colitis (UC); age: 20; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
T17p2_E7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_E7 tissue biopsy tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p2_E7 tissue biopsy tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_E7 tissue biopsy tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p2_E7 tissue biopsy tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429451
sample_title: T17p2_E7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7602-00004; disease: Ulcerative Colitis (UC); age: 36; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
T17p1_D6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D6 tissue biopsy tissue: colon mucosa; subject: 6177-00016; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p1_D6 tissue biopsy tissue: colon mucosa; subject: 6177-00016; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D6 tissue biopsy tissue: colon mucosa; subject: 6177-00016; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p1_D6 tissue biopsy tissue: colon mucosa; subject: 6177-00016; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6177-00016; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429452
sample_title: T17p1_D6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6177-00016; disease: Ulcerative Colitis (UC); age: 47; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
T17p1_C9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C9 tissue biopsy tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p1_C9 tissue biopsy tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C9 tissue biopsy tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- T17p1_C9 tissue biopsy tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429453
sample_title: T17p1_C9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7407-00026; disease: Ulcerative Colitis (UC); age: 53; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 2
T17p1_E11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E11 tissue biopsy tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- T17p1_E11 tissue biopsy tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E11 tissue biopsy tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- T17p1_E11 tissue biopsy tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429454
sample_title: T17p1_E11
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7783-00001; disease: Ulcerative Colitis (UC); age: 25; treatment: golimumab; visit: Week 6; wk6response: Yes; mayo score: 0
Colon-NHC-UC_E1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_E1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_E1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_E1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_E1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429455
sample_title: Colon-NHC-UC_E1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_G4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_G4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_G4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_G4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_G4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429456
sample_title: Colon-NHC-UC_G4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_A2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_A2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_A2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_A2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_A2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429457
sample_title: Colon-NHC-UC_A2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_A4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_A4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_A4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_A4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_A4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429458
sample_title: Colon-NHC-UC_A4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_D1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_D1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_D1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_D1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_D1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429459
sample_title: Colon-NHC-UC_D1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_H1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_H1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_H1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_H1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_H1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429460
sample_title: Colon-NHC-UC_H1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_B2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_B2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_B2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_B2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_B2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429461
sample_title: Colon-NHC-UC_B2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_G1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_G1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_G1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_G1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_G1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429462
sample_title: Colon-NHC-UC_G1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_F2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_F2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_F2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_F2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_F2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429463
sample_title: Colon-NHC-UC_F2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_D2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_D2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_D2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_D2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_D2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429464
sample_title: Colon-NHC-UC_D2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_D4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_D4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_D4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_D4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_D4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429465
sample_title: Colon-NHC-UC_D4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_B1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_B1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_B1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_B1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_B1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429466
sample_title: Colon-NHC-UC_B1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_H4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_H4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_H4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_H4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_H4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429467
sample_title: Colon-NHC-UC_H4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_C1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_C1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_C1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_C1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_C1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429468
sample_title: Colon-NHC-UC_C1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_F1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_F1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_F1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_F1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_F1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429469
sample_title: Colon-NHC-UC_F1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_B4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_B4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_B4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_B4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_B4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429470
sample_title: Colon-NHC-UC_B4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_C4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_C4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_C4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_C4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_C4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429471
sample_title: Colon-NHC-UC_C4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_A1
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_A1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_A1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_A1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_A1 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429472
sample_title: Colon-NHC-UC_A1
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_F4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_F4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_F4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_F4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_F4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429473
sample_title: Colon-NHC-UC_F4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_C2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_C2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_C2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_C2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_C2 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429474
sample_title: Colon-NHC-UC_C2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Colon-NHC-UC_E4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic control arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_E4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_E4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- Colon-NHC-UC_E4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Colon-NHC-UC_E4 tissue biopsy tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429475
sample_title: Colon-NHC-UC_E4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; disease: Healthy; treatment: Healthy; visit: Healthy; wk6response: Healthy; mayo score: .
T17p2_G2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_G2 tissue biopsy tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 12
- T17p2_G2 tissue biopsy tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 12
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_G2 tissue biopsy tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 12
- T17p2_G2 tissue biopsy tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 12
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 12
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429476
sample_title: T17p2_G2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 12
T17p1_H8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H8 tissue biopsy tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_H8 tissue biopsy tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H8 tissue biopsy tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_H8 tissue biopsy tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429477
sample_title: T17p1_H8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
T17p2_G9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_G9 tissue biopsy tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p2_G9 tissue biopsy tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_G9 tissue biopsy tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p2_G9 tissue biopsy tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429478
sample_title: T17p2_G9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
T17p2_F8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F8 tissue biopsy tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p2_F8 tissue biopsy tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F8 tissue biopsy tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p2_F8 tissue biopsy tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429479
sample_title: T17p2_F8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
T17p1_D2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D2 tissue biopsy tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_D2 tissue biopsy tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D2 tissue biopsy tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
- T17p1_D2 tissue biopsy tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429480
sample_title: T17p1_D2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 10
T17p1_G11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G11 tissue biopsy tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_G11 tissue biopsy tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G11 tissue biopsy tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_G11 tissue biopsy tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429481
sample_title: T17p1_G11
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
T17p1_F8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F8 tissue biopsy tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_F8 tissue biopsy tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F8 tissue biopsy tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_F8 tissue biopsy tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429482
sample_title: T17p1_F8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
T17p1_F4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F4 tissue biopsy tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_F4 tissue biopsy tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F4 tissue biopsy tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_F4 tissue biopsy tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429483
sample_title: T17p1_F4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
T17p1_E8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E8 tissue biopsy tissue: colon mucosa; subject: 6404-00028; disease: Ulcerative Colitis (UC); age: 46; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_E8 tissue biopsy tissue: colon mucosa; subject: 6404-00028; disease: Ulcerative Colitis (UC); age: 46; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E8 tissue biopsy tissue: colon mucosa; subject: 6404-00028; disease: Ulcerative Colitis (UC); age: 46; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_E8 tissue biopsy tissue: colon mucosa; subject: 6404-00028; disease: Ulcerative Colitis (UC); age: 46; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00028; disease: Ulcerative Colitis (UC); age: 46; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429484
sample_title: T17p1_E8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00028; disease: Ulcerative Colitis (UC); age: 46; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
T17p2_F9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F9 tissue biopsy tissue: colon mucosa; subject: 7085-00002; disease: Ulcerative Colitis (UC); age: 63; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p2_F9 tissue biopsy tissue: colon mucosa; subject: 7085-00002; disease: Ulcerative Colitis (UC); age: 63; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F9 tissue biopsy tissue: colon mucosa; subject: 7085-00002; disease: Ulcerative Colitis (UC); age: 63; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p2_F9 tissue biopsy tissue: colon mucosa; subject: 7085-00002; disease: Ulcerative Colitis (UC); age: 63; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7085-00002; disease: Ulcerative Colitis (UC); age: 63; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429485
sample_title: T17p2_F9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7085-00002; disease: Ulcerative Colitis (UC); age: 63; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
T17p1_H2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H2 tissue biopsy tissue: colon mucosa; subject: 6179-00007; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 8
- T17p1_H2 tissue biopsy tissue: colon mucosa; subject: 6179-00007; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H2 tissue biopsy tissue: colon mucosa; subject: 6179-00007; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 8
- T17p1_H2 tissue biopsy tissue: colon mucosa; subject: 6179-00007; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6179-00007; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429486
sample_title: T17p1_H2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6179-00007; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 8
T17p1_A3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A3 tissue biopsy tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_A3 tissue biopsy tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A3 tissue biopsy tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_A3 tissue biopsy tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429487
sample_title: T17p1_A3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
T17p1_G7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G7 tissue biopsy tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_G7 tissue biopsy tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G7 tissue biopsy tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- T17p1_G7 tissue biopsy tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429488
sample_title: T17p1_G7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
T17p1_A7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A7 tissue biopsy tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_A7 tissue biopsy tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A7 tissue biopsy tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_A7 tissue biopsy tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429489
sample_title: T17p1_A7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
T17p1_E9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E9 tissue biopsy tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_E9 tissue biopsy tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E9 tissue biopsy tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
- T17p1_E9 tissue biopsy tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429490
sample_title: T17p1_E9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 10
T17p2_D4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D4 tissue biopsy tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 6
- T17p2_D4 tissue biopsy tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D4 tissue biopsy tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 6
- T17p2_D4 tissue biopsy tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429491
sample_title: T17p2_D4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 6
T17p2_C2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_C2 tissue biopsy tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- T17p2_C2 tissue biopsy tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_C2 tissue biopsy tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- T17p2_C2 tissue biopsy tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429492
sample_title: T17p2_C2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 9
T17p1_H5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H5 tissue biopsy tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_H5 tissue biopsy tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H5 tissue biopsy tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_H5 tissue biopsy tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429493
sample_title: T17p1_H5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
T17p2_A3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_A3 tissue biopsy tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 5
- T17p2_A3 tissue biopsy tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 5
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_A3 tissue biopsy tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 5
- T17p2_A3 tissue biopsy tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 5
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429494
sample_title: T17p2_A3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 5
T17p1_G6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G6 tissue biopsy tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_G6 tissue biopsy tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G6 tissue biopsy tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p1_G6 tissue biopsy tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429495
sample_title: T17p1_G6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
T17p1_B6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B6 tissue biopsy tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_B6 tissue biopsy tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B6 tissue biopsy tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_B6 tissue biopsy tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429496
sample_title: T17p1_B6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
T17p1_G12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G12 tissue biopsy tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 11
- T17p1_G12 tissue biopsy tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 11
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G12 tissue biopsy tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 11
- T17p1_G12 tissue biopsy tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 11
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 11
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429497
sample_title: T17p1_G12
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 11
T17p1_D12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_D12 tissue biopsy tissue: colon mucosa; subject: 7755-00003; disease: Ulcerative Colitis (UC); age: 49; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_D12 tissue biopsy tissue: colon mucosa; subject: 7755-00003; disease: Ulcerative Colitis (UC); age: 49; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_D12 tissue biopsy tissue: colon mucosa; subject: 7755-00003; disease: Ulcerative Colitis (UC); age: 49; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p1_D12 tissue biopsy tissue: colon mucosa; subject: 7755-00003; disease: Ulcerative Colitis (UC); age: 49; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7755-00003; disease: Ulcerative Colitis (UC); age: 49; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429498
sample_title: T17p1_D12
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7755-00003; disease: Ulcerative Colitis (UC); age: 49; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
T17p1_B4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B4 tissue biopsy tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_B4 tissue biopsy tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B4 tissue biopsy tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- T17p1_B4 tissue biopsy tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429499
sample_title: T17p1_B4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 0; wk6response: No; mayo score: 7
T17p2_E2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_E2 tissue biopsy tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_E2 tissue biopsy tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_E2 tissue biopsy tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- T17p2_E2 tissue biopsy tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429500
sample_title: T17p2_E2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 7
T17p2_E3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_E3 tissue biopsy tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p2_E3 tissue biopsy tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_E3 tissue biopsy tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- T17p2_E3 tissue biopsy tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429501
sample_title: T17p2_E3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 6
T17p2_E5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_E5 tissue biopsy tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p2_E5 tissue biopsy tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_E5 tissue biopsy tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 9
- T17p2_E5 tissue biopsy tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429502
sample_title: T17p2_E5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 9
T17p2_D6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D6 tissue biopsy tissue: colon mucosa; subject: 7601-00004; disease: Ulcerative Colitis (UC); age: 33; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p2_D6 tissue biopsy tissue: colon mucosa; subject: 7601-00004; disease: Ulcerative Colitis (UC); age: 33; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D6 tissue biopsy tissue: colon mucosa; subject: 7601-00004; disease: Ulcerative Colitis (UC); age: 33; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 8
- T17p2_D6 tissue biopsy tissue: colon mucosa; subject: 7601-00004; disease: Ulcerative Colitis (UC); age: 33; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7601-00004; disease: Ulcerative Colitis (UC); age: 33; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429503
sample_title: T17p2_D6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7601-00004; disease: Ulcerative Colitis (UC); age: 33; treatment: Placebo; visit: Week 0; wk6response: Yes; mayo score: 8
T17p1_B3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B3 tissue biopsy tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p1_B3 tissue biopsy tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B3 tissue biopsy tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p1_B3 tissue biopsy tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429504
sample_title: T17p1_B3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6402-00006; disease: Ulcerative Colitis (UC); age: 52; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
T17p1_E2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_E2 tissue biopsy tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_E2 tissue biopsy tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_E2 tissue biopsy tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_E2 tissue biopsy tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429505
sample_title: T17p1_E2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7213-00007; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
T17p1_C6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C6 tissue biopsy tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
- T17p1_C6 tissue biopsy tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C6 tissue biopsy tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
- T17p1_C6 tissue biopsy tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429506
sample_title: T17p1_C6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7377-00009; disease: Ulcerative Colitis (UC); age: 58; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
T17p2_E4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_E4 tissue biopsy tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
- T17p2_E4 tissue biopsy tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_E4 tissue biopsy tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
- T17p2_E4 tissue biopsy tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429507
sample_title: T17p2_E4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7430-00001; disease: Ulcerative Colitis (UC); age: 40; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
T17p1_G4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G4 tissue biopsy tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
- T17p1_G4 tissue biopsy tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G4 tissue biopsy tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
- T17p1_G4 tissue biopsy tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429508
sample_title: T17p1_G4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6207-00002; disease: Ulcerative Colitis (UC); age: 19; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
T17p1_C11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C11 tissue biopsy tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
- T17p1_C11 tissue biopsy tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C11 tissue biopsy tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
- T17p1_C11 tissue biopsy tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429509
sample_title: T17p1_C11
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7781-00002; disease: Ulcerative Colitis (UC); age: 27; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 5
T17p1_H7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H7 tissue biopsy tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_H7 tissue biopsy tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H7 tissue biopsy tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_H7 tissue biopsy tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429510
sample_title: T17p1_H7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7407-00024; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
T17p1_A6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A6 tissue biopsy tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_A6 tissue biopsy tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A6 tissue biopsy tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_A6 tissue biopsy tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429511
sample_title: T17p1_A6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00023; disease: Ulcerative Colitis (UC); age: 38; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
T17p2_G8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_G8 tissue biopsy tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
- T17p2_G8 tissue biopsy tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_G8 tissue biopsy tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
- T17p2_G8 tissue biopsy tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429512
sample_title: T17p2_G8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7460-00003; disease: Ulcerative Colitis (UC); age: 28; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 7
T17p2_H2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_H2 tissue biopsy tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p2_H2 tissue biopsy tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_H2 tissue biopsy tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p2_H2 tissue biopsy tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429513
sample_title: T17p2_H2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7532-00001; disease: Ulcerative Colitis (UC); age: 44; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
T17p1_H11
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H11 tissue biopsy tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_H11 tissue biopsy tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H11 tissue biopsy tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_H11 tissue biopsy tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429514
sample_title: T17p1_H11
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7783-00002; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
T17p1_G8
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_G8 tissue biopsy tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_G8 tissue biopsy tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_G8 tissue biopsy tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_G8 tissue biopsy tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429515
sample_title: T17p1_G8
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00029; disease: Ulcerative Colitis (UC); age: 21; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
T17p1_A9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_A9 tissue biopsy tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_A9 tissue biopsy tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_A9 tissue biopsy tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- T17p1_A9 tissue biopsy tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429516
sample_title: T17p1_A9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7407-00025; disease: Ulcerative Colitis (UC); age: 41; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 9
T17p2_D2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_D2 tissue biopsy tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- T17p2_D2 tissue biopsy tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_D2 tissue biopsy tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- T17p2_D2 tissue biopsy tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429517
sample_title: T17p2_D2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7530-00007; disease: Ulcerative Colitis (UC); age: 67; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
T17p1_H6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H6 tissue biopsy tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_H6 tissue biopsy tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H6 tissue biopsy tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p1_H6 tissue biopsy tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429518
sample_title: T17p1_H6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6404-00024; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
T17p2_F2
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F2 tissue biopsy tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p2_F2 tissue biopsy tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F2 tissue biopsy tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- T17p2_F2 tissue biopsy tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429519
sample_title: T17p2_F2
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7755-00004; disease: Ulcerative Colitis (UC); age: 51; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 3
T17p1_H12
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_H12 tissue biopsy tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 11
- T17p1_H12 tissue biopsy tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 11
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_H12 tissue biopsy tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 11
- T17p1_H12 tissue biopsy tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 11
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 11
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429520
sample_title: T17p1_H12
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7753-00001; disease: Ulcerative Colitis (UC); age: 47; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 11
T17p2_B3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_B3 tissue biopsy tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 3
- T17p2_B3 tissue biopsy tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 3
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_B3 tissue biopsy tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 3
- T17p2_B3 tissue biopsy tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 3
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 3
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429521
sample_title: T17p2_B3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7734-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 3
T17p2_H6
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_H6 tissue biopsy tissue: colon mucosa; subject: 7752-00012; disease: Ulcerative Colitis (UC); age: 24; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 7
- T17p2_H6 tissue biopsy tissue: colon mucosa; subject: 7752-00012; disease: Ulcerative Colitis (UC); age: 24; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 7
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_H6 tissue biopsy tissue: colon mucosa; subject: 7752-00012; disease: Ulcerative Colitis (UC); age: 24; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 7
- T17p2_H6 tissue biopsy tissue: colon mucosa; subject: 7752-00012; disease: Ulcerative Colitis (UC); age: 24; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 7
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7752-00012; disease: Ulcerative Colitis (UC); age: 24; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 7
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429522
sample_title: T17p2_H6
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7752-00012; disease: Ulcerative Colitis (UC); age: 24; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 7
T17p1_C4
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_C4 tissue biopsy tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_C4 tissue biopsy tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_C4 tissue biopsy tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- T17p1_C4 tissue biopsy tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429523
sample_title: T17p1_C4
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 6101-00008; disease: Ulcerative Colitis (UC); age: 45; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 8
T17p1_F9
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_F9 tissue biopsy tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p1_F9 tissue biopsy tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_F9 tissue biopsy tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- T17p1_F9 tissue biopsy tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429524
sample_title: T17p1_F9
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7084-00001; disease: Ulcerative Colitis (UC); age: 30; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 6
T17p1_B7
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p1_B7 tissue biopsy tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
- T17p1_B7 tissue biopsy tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p1_B7 tissue biopsy tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
- T17p1_B7 tissue biopsy tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429525
sample_title: T17p1_B7
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7376-00004; disease: Ulcerative Colitis (UC); age: 42; treatment: Placebo; visit: Week 6; wk6response: No; mayo score: 6
T17p2_H3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_H3 tissue biopsy tissue: colon mucosa; subject: 7746-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p2_H3 tissue biopsy tissue: colon mucosa; subject: 7746-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_H3 tissue biopsy tissue: colon mucosa; subject: 7746-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p2_H3 tissue biopsy tissue: colon mucosa; subject: 7746-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7746-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429526
sample_title: T17p2_H3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7746-00011; disease: Ulcerative Colitis (UC); age: 22; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
T17p2_F5
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F5 tissue biopsy tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p2_F5 tissue biopsy tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F5 tissue biopsy tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p2_F5 tissue biopsy tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429527
sample_title: T17p2_F5
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7532-00002; disease: Ulcerative Colitis (UC); age: 26; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
T17p2_F3
Not included: the study role or selected requirements have incomplete or conflicting evidence. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Insufficient evidence. specimen category excludes: Biofluid — Insufficient evidence. Study role: Explicit characteristic comparison arm detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Insufficient evidence
- The required value is not reported.
- T17p2_F3 tissue biopsy tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p2_F3 tissue biopsy tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Insufficient evidence
- The required value is not reported.
- T17p2_F3 tissue biopsy tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- T17p2_F3 tissue biopsy tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
Source metadata
- Source name
- tissue biopsy
- Characteristics
- tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2429528
sample_title: T17p2_F3
source_name: tissue biopsy
characteristics: tissue: colon mucosa; subject: 7506-00001; disease: Ulcerative Colitis (UC); age: 39; treatment: Placebo; visit: Week 6; wk6response: Yes; mayo score: 1