Active UC_0038S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0038S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0038S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 8; age (years): 36; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480251
sample_title: Active UC_0038S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 8; age (years): 36; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0078S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0078S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0078S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 2; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 0.5; age (years): 42; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480252
sample_title: Active UC_0078S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 2; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 0.5; age (years): 42; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0083S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0083S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0083S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: no treatment; endoscopic_mayo_score: 1; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 0; age (years): 29; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480253
sample_title: Active UC_0083S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: no treatment; endoscopic_mayo_score: 1; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 0; age (years): 29; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0087S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0087S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0087S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: Immunosupresor; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 4; age (years): 50; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480254
sample_title: Active UC_0087S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: Immunosupresor; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 4; age (years): 50; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0091S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0091S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0091S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: Steroids; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 12.5; age (years): 33; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480255
sample_title: Active UC_0091S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: Steroids; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 12.5; age (years): 33; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0097S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0097S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0097S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Pancolitis; treatment: anti-TNF; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 2; age (years): 28; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480256
sample_title: Active UC_0097S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Pancolitis; treatment: anti-TNF; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 2; age (years): 28; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0112S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0112S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0112S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 11; age (years): 65; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480257
sample_title: Active UC_0112S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 11; age (years): 65; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0114S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0114S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0114S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Pancolitis; treatment: 5-asa; endoscopic_mayo_score: 2; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 10.5; age (years): 73; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480258
sample_title: Active UC_0114S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Pancolitis; treatment: 5-asa; endoscopic_mayo_score: 2; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 10.5; age (years): 73; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0145S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0145S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0145S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 15; age (years): 56; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480259
sample_title: Active UC_0145S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 15; age (years): 56; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0155S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0155S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0155S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 14; age (years): 47; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480260
sample_title: Active UC_0155S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 14; age (years): 47; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0164S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0164S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0164S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 10.5; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480261
sample_title: Active UC_0164S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 10.5; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0169S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0169S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0169S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: no treatment; endoscopic_mayo_score: 2; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 11.5; age (years): 54; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480262
sample_title: Active UC_0169S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: no treatment; endoscopic_mayo_score: 2; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 11.5; age (years): 54; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0182S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0182S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0182S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 2.5; age (years): 39; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480263
sample_title: Active UC_0182S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 2.5; age (years): 39; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0186S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0186S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0186S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Pancolitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 0; age (years): 57; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480264
sample_title: Active UC_0186S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Pancolitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 0; age (years): 57; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0218S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0218S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0218S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 9; age (years): 45; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480265
sample_title: Active UC_0218S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Left-sided colitis; treatment: 5-asa; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 9; age (years): 45; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0219S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0219S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0219S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Pancolitis; treatment: anti-TNF; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 6.5; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480266
sample_title: Active UC_0219S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Pancolitis; treatment: anti-TNF; endoscopic_mayo_score: 3; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 6.5; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active UC_0419S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0419S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active UC_0419S Human peripheral whole blood from endoscopically active UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity:...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Proctitis; treatment: 5-asa; endoscopic_mayo_score: 2; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 17; age (years): 49; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480267
sample_title: Active UC_0419S
source_name: Human peripheral whole blood from endoscopically active UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Active; disease_extension: Proctitis; treatment: 5-asa; endoscopic_mayo_score: 2; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 17; age (years): 49; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Inactive UC_0043S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0043S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0043S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Proctitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 32.5; age (years): 52; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480268
sample_title: Inactive UC_0043S
source_name: Human peripheral whole blood from endoscopically inactive UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Proctitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 32.5; age (years): 52; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Inactive UC_0053S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0053S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0053S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Pancolitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 13; age (years): 60; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480269
sample_title: Inactive UC_0053S
source_name: Human peripheral whole blood from endoscopically inactive UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Pancolitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 13; age (years): 60; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Inactive UC_0103S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0103S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0103S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Left-sided colitis; treatment: No treatment; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 11; age (years): 52; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480270
sample_title: Inactive UC_0103S
source_name: Human peripheral whole blood from endoscopically inactive UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Left-sided colitis; treatment: No treatment; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 11; age (years): 52; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Inactive UC_0125S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0125S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0125S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Left-sided colitis; treatment: No treatment; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 13; age (years): 43; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480271
sample_title: Inactive UC_0125S
source_name: Human peripheral whole blood from endoscopically inactive UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Left-sided colitis; treatment: No treatment; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 13; age (years): 43; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Inactive UC_0135S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0135S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0135S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Left-sided colitis; treatment: Immunosupressors; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 29; age (years): 41; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480272
sample_title: Inactive UC_0135S
source_name: Human peripheral whole blood from endoscopically inactive UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Left-sided colitis; treatment: Immunosupressors; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 29; age (years): 41; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Inactive UC_0159S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0159S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0159S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Pancolitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 19; age (years): 37; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480273
sample_title: Inactive UC_0159S
source_name: Human peripheral whole blood from endoscopically inactive UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Pancolitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 19; age (years): 37; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Inactive UC_0307S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0307S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0307S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Proctitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 12.5; age (years): 57; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480274
sample_title: Inactive UC_0307S
source_name: Human peripheral whole blood from endoscopically inactive UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Proctitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 12.5; age (years): 57; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Inactive UC_0308S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Explicit sample label case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0308S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive UC_0308S Human peripheral whole blood from endoscopically inactive UC patient subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive UC patient
- Characteristics
- subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Proctitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 13.5; age (years): 58; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480275
sample_title: Inactive UC_0308S
source_name: Human peripheral whole blood from endoscopically inactive UC patient
characteristics: subject status: Ulcerative colitis (UC) patient; case_phenotype: Colitis; endoscopic_activity: Inactive; disease_extension: Proctitis; treatment: 5-asa; endoscopic_mayo_score: 0; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 13.5; age (years): 58; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Control_0152S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0152S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0152S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 35; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480276
sample_title: Control_0152S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 35; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Control_0153S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0153S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0153S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 39; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480277
sample_title: Control_0153S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 39; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Control_0154S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0154S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0154S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 39; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480278
sample_title: Control_0154S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 39; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Control_0156S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0156S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0156S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 34; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480279
sample_title: Control_0156S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 34; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0170S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0170S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0170S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 55; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480280
sample_title: Control_0170S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 55; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Control_0185S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0185S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0185S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 29; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480281
sample_title: Control_0185S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 29; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Control_0193S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0193S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0193S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 57; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480282
sample_title: Control_0193S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 57; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Control_0200S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0200S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0200S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 44; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480283
sample_title: Control_0200S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 44; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0201S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0201S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0201S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 51; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480284
sample_title: Control_0201S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 51; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0211S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0211S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0211S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 49; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480285
sample_title: Control_0211S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 49; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0211Sbis
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0211Sbis Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n....
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0211Sbis Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n....
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 49; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480286
sample_title: Control_0211Sbis
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 49; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Control_0212S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0212S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0212S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480287
sample_title: Control_0212S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0212Sbis
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0212Sbis Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n....
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0212Sbis Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n....
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480288
sample_title: Control_0212Sbis
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Control_0213S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0213S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0213S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 50; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480289
sample_title: Control_0213S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 50; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0214S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0214S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0214S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 31; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480290
sample_title: Control_0214S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 31; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0215S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0215S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0215S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 38; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480291
sample_title: Control_0215S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 38; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0222S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0222S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0222S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 55; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480292
sample_title: Control_0222S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 55; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0223S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0223S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0223S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 38; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480293
sample_title: Control_0223S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 38; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0224S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0224S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0224S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 54; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480294
sample_title: Control_0224S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 54; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Control_0229S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0229S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0229S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 55; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480295
sample_title: Control_0229S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 55; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Control_0249S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0249S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0249S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 54; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480296
sample_title: Control_0249S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 54; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Control_0420S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Sample-local control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0420S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Control_0420S Human peripheral whole blood from non-IBD control subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.;...
Source metadata
- Source name
- Human peripheral whole blood from non-IBD control
- Characteristics
- subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 55; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480297
sample_title: Control_0420S
source_name: Human peripheral whole blood from non-IBD control
characteristics: subject status: non-IBD (inflammatory bowel disease) control; case_phenotype: Control; endoscopic_activity: n.a.; disease_extension: n.a.; treatment: n.a.; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): n.a.; age (years): 55; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0143S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0143S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0143S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: anti-TNF + Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 11.5; partial cdeis: 18; ibd_evolution_time (years): 28; age (years): 48; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480298
sample_title: Active CD_0143S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: anti-TNF + Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 11.5; partial cdeis: 18; ibd_evolution_time (years): 28; age (years): 48; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0143Sbis
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0143Sbis Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: A...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0143Sbis Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: A...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: anti-TNF + Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 11.5; partial cdeis: 18; ibd_evolution_time (years): 28; age (years): 48; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480299
sample_title: Active CD_0143Sbis
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: anti-TNF + Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 11.5; partial cdeis: 18; ibd_evolution_time (years): 28; age (years): 48; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0144S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0144S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0144S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 14; partial cdeis: 25; ibd_evolution_time (years): 9; age (years): 30; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480300
sample_title: Active CD_0144S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 14; partial cdeis: 25; ibd_evolution_time (years): 9; age (years): 30; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0157S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0157S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0157S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: anti-TNF + Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 14.8; partial cdeis: 24; ibd_evolution_time (years): 1; age (years): 47; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480301
sample_title: Active CD_0157S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: anti-TNF + Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 14.8; partial cdeis: 24; ibd_evolution_time (years): 1; age (years): 47; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0342S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0342S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0342S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 36.4; partial cdeis: 28; ibd_evolution_time (years): 0; age (years): 29; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480302
sample_title: Active CD_0342S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 36.4; partial cdeis: 28; ibd_evolution_time (years): 0; age (years): 29; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0438S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0438S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0438S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 19.8; partial cdeis: 21.5; ibd_evolution_time (years): 0.4; age (years): 21; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480303
sample_title: Active CD_0438S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 19.8; partial cdeis: 21.5; ibd_evolution_time (years): 0.4; age (years): 21; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0036S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0036S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0036S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 9; ibd_evolution_time (years): 32; age (years): 56; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480304
sample_title: Active CD_0036S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 9; ibd_evolution_time (years): 32; age (years): 56; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0037S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0037S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0037S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 4; partial cdeis: 7; ibd_evolution_time (years): 15; age (years): 49; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480305
sample_title: Active CD_0037S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 4; partial cdeis: 7; ibd_evolution_time (years): 15; age (years): 49; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0051S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0051S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0051S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 4.6; partial cdeis: 23; ibd_evolution_time (years): 9.5; age (years): 35; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480306
sample_title: Active CD_0051S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 4.6; partial cdeis: 23; ibd_evolution_time (years): 9.5; age (years): 35; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0057S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0057S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0057S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 12; ibd_evolution_time (years): 7.5; age (years): 43; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480307
sample_title: Active CD_0057S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 12; ibd_evolution_time (years): 7.5; age (years): 43; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0069S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0069S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0069S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 5.4; partial cdeis: 16; ibd_evolution_time (years): 5; age (years): 24; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480308
sample_title: Active CD_0069S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 5.4; partial cdeis: 16; ibd_evolution_time (years): 5; age (years): 24; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0084S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0084S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0084S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Steroids; endoscopic_mayo_score: n.a.; cdeis: 10; partial cdeis: 26; ibd_evolution_time (years): 0; age (years): 54; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480309
sample_title: Active CD_0084S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Steroids; endoscopic_mayo_score: n.a.; cdeis: 10; partial cdeis: 26; ibd_evolution_time (years): 0; age (years): 54; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0089S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0089S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0089S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: Steroids; endoscopic_mayo_score: n.a.; cdeis: 4.6; partial cdeis: 9; ibd_evolution_time (years): 9.5; age (years): 29; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480310
sample_title: Active CD_0089S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: Steroids; endoscopic_mayo_score: n.a.; cdeis: 4.6; partial cdeis: 9; ibd_evolution_time (years): 9.5; age (years): 29; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0090S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0090S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0090S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 24; ibd_evolution_time (years): 3; age (years): 52; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480311
sample_title: Active CD_0090S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 24; ibd_evolution_time (years): 3; age (years): 52; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0093S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0093S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0093S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 17; partial cdeis: 21; ibd_evolution_time (years): 15; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480312
sample_title: Active CD_0093S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 17; partial cdeis: 21; ibd_evolution_time (years): 15; age (years): 35; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0100S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0100S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0100S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 21.75; partial cdeis: 38; ibd_evolution_time (years): 0.7; age (years): 47; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480313
sample_title: Active CD_0100S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 21.75; partial cdeis: 38; ibd_evolution_time (years): 0.7; age (years): 47; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0108S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0108S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0108S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 5; partial cdeis: 24; ibd_evolution_time (years): 1; age (years): 29; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480314
sample_title: Active CD_0108S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 5; partial cdeis: 24; ibd_evolution_time (years): 1; age (years): 29; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0110S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0110S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0110S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 12.5; partial cdeis: 30; ibd_evolution_time (years): 12; age (years): 20; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480315
sample_title: Active CD_0110S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 12.5; partial cdeis: 30; ibd_evolution_time (years): 12; age (years): 20; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0115S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0115S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0115S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 24; ibd_evolution_time (years): 24; age (years): 46; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480316
sample_title: Active CD_0115S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 24; ibd_evolution_time (years): 24; age (years): 46; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0128S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0128S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0128S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 2; partial cdeis: 10; ibd_evolution_time (years): 18.5; age (years): 41; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480317
sample_title: Active CD_0128S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 2; partial cdeis: 10; ibd_evolution_time (years): 18.5; age (years): 41; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0130S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0130S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0130S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 13.8; partial cdeis: 26; ibd_evolution_time (years): 1.5; age (years): 33; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480318
sample_title: Active CD_0130S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 13.8; partial cdeis: 26; ibd_evolution_time (years): 1.5; age (years): 33; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0137S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0137S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0137S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 8.2; partial cdeis: 29; ibd_evolution_time (years): 8; age (years): 31; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480319
sample_title: Active CD_0137S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 8.2; partial cdeis: 29; ibd_evolution_time (years): 8; age (years): 31; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0142S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0142S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0142S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: n.a.; cdeis: 3.4; partial cdeis: 17; ibd_evolution_time (years): 10; age (years): 67; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480320
sample_title: Active CD_0142S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: n.a.; cdeis: 3.4; partial cdeis: 17; ibd_evolution_time (years): 10; age (years): 67; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Active CD_0181S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0181S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0181S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 12.2; partial cdeis: 37; ibd_evolution_time (years): 10.5; age (years): 23; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480321
sample_title: Active CD_0181S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 12.2; partial cdeis: 37; ibd_evolution_time (years): 10.5; age (years): 23; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0225S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0225S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0225S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 9.5; partial cdeis: 27; ibd_evolution_time (years): 3.5; age (years): 29; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480322
sample_title: Active CD_0225S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 9.5; partial cdeis: 27; ibd_evolution_time (years): 3.5; age (years): 29; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0258S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0258S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0258S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: n.a.; cdeis: 30; partial cdeis: 30; ibd_evolution_time (years): 3.5; age (years): 32; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480323
sample_title: Active CD_0258S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: n.a.; cdeis: 30; partial cdeis: 30; ibd_evolution_time (years): 3.5; age (years): 32; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0258Sbis
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0258Sbis Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: A...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0258Sbis Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: A...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: n.a.; cdeis: 30; partial cdeis: 30; ibd_evolution_time (years): 3.5; age (years): 32; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480324
sample_title: Active CD_0258Sbis
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: colonic; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: n.a.; cdeis: 30; partial cdeis: 30; ibd_evolution_time (years): 3.5; age (years): 32; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Active CD_0273S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0273S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0273S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 3.4; partial cdeis: 17; ibd_evolution_time (years): 4.5; age (years): 36; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480325
sample_title: Active CD_0273S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 3.4; partial cdeis: 17; ibd_evolution_time (years): 4.5; age (years): 36; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0312S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0312S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0312S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 6.5; partial cdeis: n.a.; ibd_evolution_time (years): 3; age (years): 18; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480326
sample_title: Active CD_0312S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 6.5; partial cdeis: n.a.; ibd_evolution_time (years): 3; age (years): 18; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0377S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0377S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0377S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 2.4; partial cdeis: 14; ibd_evolution_time (years): 13.5; age (years): 35; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480327
sample_title: Active CD_0377S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 2.4; partial cdeis: 14; ibd_evolution_time (years): 13.5; age (years): 35; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0405S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0405S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0405S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 5.4; partial cdeis: 21; ibd_evolution_time (years): 12; age (years): 21; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480328
sample_title: Active CD_0405S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 5.4; partial cdeis: 21; ibd_evolution_time (years): 12; age (years): 21; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0412S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0412S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0412S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 4; partial cdeis: 20; ibd_evolution_time (years): 19; age (years): 40; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480329
sample_title: Active CD_0412S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 4; partial cdeis: 20; ibd_evolution_time (years): 19; age (years): 40; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0415S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0415S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0415S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 24; ibd_evolution_time (years): 10; age (years): 32; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480330
sample_title: Active CD_0415S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 4.8; partial cdeis: 24; ibd_evolution_time (years): 10; age (years): 32; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0416S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0416S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0416S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 7.6; partial cdeis: 23; ibd_evolution_time (years): 13; age (years): 50; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480331
sample_title: Active CD_0416S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 7.6; partial cdeis: 23; ibd_evolution_time (years): 13; age (years): 50; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0421S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0421S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0421S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 11.28; partial cdeis: 25; ibd_evolution_time (years): 7; age (years): 37; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480332
sample_title: Active CD_0421S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 11.28; partial cdeis: 25; ibd_evolution_time (years): 7; age (years): 37; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0423S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0423S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0423S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: n.a.; cdeis: 9.2; partial cdeis: 21; ibd_evolution_time (years): 0.6; age (years): 57; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480333
sample_title: Active CD_0423S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor + Steroids; endoscopic_mayo_score: n.a.; cdeis: 9.2; partial cdeis: 21; ibd_evolution_time (years): 0.6; age (years): 57; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0431S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0431S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0431S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 3.2; partial cdeis: 16; ibd_evolution_time (years): 0.4; age (years): 28; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480334
sample_title: Active CD_0431S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 3.2; partial cdeis: 16; ibd_evolution_time (years): 0.4; age (years): 28; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0440S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0440S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0440S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 5.6; partial cdeis: 14; ibd_evolution_time (years): 2; age (years): 22; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480335
sample_title: Active CD_0440S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: Immunosupresor; endoscopic_mayo_score: n.a.; cdeis: 5.6; partial cdeis: 14; ibd_evolution_time (years): 2; age (years): 22; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0441S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0441S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0441S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 22.6; partial cdeis: 25; ibd_evolution_time (years): 1; age (years): 28; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480336
sample_title: Active CD_0441S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileocolonic; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 22.6; partial cdeis: 25; ibd_evolution_time (years): 1; age (years): 28; gender: Female; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0445S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0445S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0445S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 6.4; partial cdeis: 32; ibd_evolution_time (years): 0; age (years): 64; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480337
sample_title: Active CD_0445S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: no treatment; endoscopic_mayo_score: n.a.; cdeis: 6.4; partial cdeis: 32; ibd_evolution_time (years): 0; age (years): 64; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Active CD_0076S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0076S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Active CD_0076S Human peripheral whole blood from endoscopically active CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Acti...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically active CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: anti-TNF + Steroids; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 1.5; age (years): 27; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480338
sample_title: Active CD_0076S
source_name: Human peripheral whole blood from endoscopically active CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Active; disease_extension: ileal; treatment: anti-TNF + Steroids; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 1.5; age (years): 27; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Inactive CD_0092S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0092S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0092S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 1; age (years): 20; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480339
sample_title: Inactive CD_0092S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: n.a.; partial cdeis: n.a.; ibd_evolution_time (years): 1; age (years): 20; gender: Male; tissue: peripheral whole blood; microarray_batch: 1
Inactive CD_0009S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0009S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0009S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileal; treatment: Immunosupressors; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 2.5; age (years): 18; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480340
sample_title: Inactive CD_0009S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileal; treatment: Immunosupressors; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 2.5; age (years): 18; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Inactive CD_0018S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0018S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0018S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: Immunosupressors; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 18; age (years): 37; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480341
sample_title: Inactive CD_0018S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: Immunosupressors; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 18; age (years): 37; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Inactive CD_0311S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0311S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0311S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 9.5; age (years): 38; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480342
sample_title: Inactive CD_0311S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 9.5; age (years): 38; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Inactive CD_0349S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0349S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0349S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 0.4; partial cdeis: 1; ibd_evolution_time (years): 11.5; age (years): 58; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480343
sample_title: Inactive CD_0349S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: 5-asa; endoscopic_mayo_score: n.a.; cdeis: 0.4; partial cdeis: 1; ibd_evolution_time (years): 11.5; age (years): 58; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Inactive CD_0149S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0149S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0149S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 15; age (years): 36; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480344
sample_title: Inactive CD_0149S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: anti-TNF; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 15; age (years): 36; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Inactive CD_0289S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0289S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0289S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileal; treatment: anti-TNF + Immunosupressors; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 12; age (years): 42; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480345
sample_title: Inactive CD_0289S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileal; treatment: anti-TNF + Immunosupressors; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 12; age (years): 42; gender: Female; tissue: peripheral whole blood; microarray_batch: 2
Inactive CD_0410S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Treatment control marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0410S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0410S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: No treatment; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 11; age (years): 36; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480346
sample_title: Inactive CD_0410S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: ileocolonic; treatment: No treatment; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 11; age (years): 36; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
Inactive CD_0432S
Excluded: at least one selected requirement is not met. organism: Homo sapiens — Insufficient evidence. assay type: bulk RNA-seq — Insufficient evidence. specimen category: Tissue or biopsy — Does not meet requirement. specimen category excludes: Biofluid — Does not meet requirement. Study role: Case marker detected.
Requirements and decision evidence
-
organism: Homo sapiens — Insufficient evidence
- The required value is not reported.
-
assay type: bulk RNA-seq — Insufficient evidence
- The required value is not reported.
-
specimen category: Tissue or biopsy — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0432S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
-
excluded sample type excludes: cell line, organoid, xenograft — Meets requirement
- Supported by the indexed evidence.
-
specimen category excludes: Biofluid — Does not meet requirement
- The reported value differs from the selected requirement.
- Inactive CD_0432S Human peripheral whole blood from endoscopically inactive CD patient subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: ...
Source metadata
- Source name
- Human peripheral whole blood from endoscopically inactive CD patient
- Characteristics
- subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: colonic; treatment: anti-TNF + Immunosupressors; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 10; age (years): 60; gender: Male; tissue: peripheral whole blood; microarray_batch: 2
- Description
- Not reported
- Indexed organism evidence
- INFERRED · PARENT_INHERITED: Not reported
- Indexed assay evidence
- INFERRED · PARENT_INHERITED: Not reported
- Source
- GEO
Original indexed metadata
sample_accession: GSM2480347
sample_title: Inactive CD_0432S
source_name: Human peripheral whole blood from endoscopically inactive CD patient
characteristics: subject status: Crohn's disease (CD) patient; case_phenotype: Crohn; endoscopic_activity: Inactive; disease_extension: colonic; treatment: anti-TNF + Immunosupressors; endoscopic_mayo_score: n.a.; cdeis: 0; partial cdeis: 0; ibd_evolution_time (years): 10; age (years): 60; gender: Male; tissue: peripheral whole blood; microarray_batch: 2