Integrated analysis Of Biopsies From Inflammatory Bowel Disease Patients Identifies SAA1 As A Link Between Mucosal Microbes With TH17 And TH22 Cells [diseased subjects]

Whole-study status Not suitable

Dataset does not meet the current suitability threshold.

Whole-study downloads — these do not apply your sample requirements.

Selected cohort requirements

Samples meeting selected requirements: 0 cases / 0 controls

23 case / 18 control samples elsewhere in the study have incomplete or conflicting evidence; they are not included above

Patient pairs verified in indexed sample metadata: 0

A case/control comparison meeting these requirements is not confirmed.

Counts describe samples, not independent patients. Pair verification uses explicit subject identifiers in indexed sample metadata. Zero verified pairs does not establish that the study is unpaired; reported matched-normal design alone is insufficient.

Source: GEO
Assay: microarray
Organism: Homo sapiens
Whole-study samples: 41 samples
Specimen: Biopsy
Reported/interpreted study design: Disease/model vs control Design classification does not establish patient pairs.

Comparison type: Tumor vs normal
Contributors: Tang MS, Leung JM, Gundra UM, Loke P, Tang M
Contact name: Mei San Tang
Submission date: 2017-03-15
Last update: 2018-11-27
Organization: Washington University in St Louis
Department: Pathology & Immunology
Public date: 2017-11-11
Experiment types: Expression profiling by array
Platforms: GPL13607 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version)
Series type: SubSeries
SubSeries: Not available
BioProject: PRJNA379314

Summary

Inflammatory bowel diseases (IBD) are believed to be driven by dysregulated interactions between the host and the gut microbiota. Our goal is to characterize the relationships between mucosal T cells, the host tissue environment and microbial communities in IBD patients to identify new therapeutic targets. We identified 26 predictors from our combined data set that were effective in distinguishing between regions of the intestine undergoing active inflammation and regions that were normal. Network analysis on these 26 predictors revealed SAA1 as the most connected node linking the abundance of the genus Bacteroides with the production of IL17 and IL22 by CD4+ T cells. The SAA1-linked microbial and transcriptome interactions were further validated with data from the pediatric IBD RISK cohort. This study identifies expression of SAA1 as an important link between mucosal T cells, microbial communities and their tissue environment in IBD patients. A combination of FACS, gene expression and microbial profiling can distinguish between intestinal inflammatory states in IBD regardless of disease types.

Overall design

We characterized mucosal CD4+ T cells using flow cytometry (FACS), along with matching mucosal global gene expression and microbial communities data from 35 pinch biopsy samples from IBD patients. We analyzed these data sets using an integrated framework to identify predictors of inflammatory states and then validated the putative relationship networks by analyzing data from the pediatric RISK cohort.

Source Evidence

4 sources

Source	Contribution	Status
GEO	Original dataset metadata, sample metadata, source links, and GEO data availability flags. Sample records 41 GSM samples	Primary source
recount3	Planned trusted source for processed count availability.	No match found
Expression Atlas	Planned source for curated expression experiment links.	No match found
PubMed	Primary GEO citations and related PubMed articles that mention this dataset. 2 linked publications 2 DOIs Primary publication Integrated Analysis of Biopsies from Inflammatory Bowel Disease Patients Identifies SAA1 as a Link Between Mucosal Microbes with TH17 and TH22 Cells. Inflammatory bowel diseases, 2017 PubMed DOI Related publications Identification of useful genes from multiple microarrays for ulcerative colitis diagnosis based on machine learning methods. Scientific reports, 2022 PubMed DOI	Available

Metadata Quality Components

Persisted metadata quality

100 pts

Clarity: 100%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Anatomical source metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Analysis Readiness

Ready after review

97% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

Verify the proposed sample assignments and case-versus-control comparison against the GEO metadata before using them in DESeq2 or another differential-expression tool.
Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Review the grouping table for biologically meaningful differences that the automated checks may not detect.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source traceability preserved

Ready

The dataset and sample accessions can be traced back to GEO.

Keep GEO accessions with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Assay context may require expert handling before DESeq2-style analysis.

Why This Is Ranked Here

Tumor vs normal

Not suitable Dataset does not meet the current suitability threshold.

Applied Review Decisions

No active review decisions affect this ranking.

Derived Classifications

Assay differs from search intent Microarray Search intent expects bulk RNA-seq. Assay came from Normalization rules.
Disease context Crohn's disease, inflammatory bowel disease, ulcerative colitis Disease context came from Normalization rules.
Likely case group Inflamed tissue 23 samples
Likely control group Normal tissue 18 samples

Intent Interpretation

Downgrade or exclusion reason Downgraded assay: microarray cohorts are separated from the RNA-seq intent. Derived from current-intent ranking reasons.

Ranking Facts

Supporting evidence

Comparison: Disease/model vs control. Specimen: Biopsy. Comparison suitability: 0%.
Interpreted disease metadata: Crohn's disease, Inflammatory bowel disease, Ulcerative colitis.
Processed data is available for downstream review.
External evidence: PubMed links 2 publications; 2 DOIs available: PMID 28806280, PMID 35705632.
Publication context: Integrated Analysis of Biopsies from Inflammatory Bowel Disease Patients Identifies SAA1 as a Link Between Mucosal Microbes with TH17 and TH22 Cells.. Inflammatory bowel diseases, 2017. PMID 28806280. DOI 10.1097/MIB.0000000000001208.
Publication context: Identification of useful genes from multiple microarrays for ulcerative colitis diagnosis based on machine learning methods.. Scientific reports, 2022. PMID 35705632. DOI 10.1038/s41598-022-14048-6.

Cautions

Downgraded assay: microarray cohorts are separated from the RNA-seq intent.
Disease/control design without a tumor/normal comparison is outside tumor/normal triage.
Overall score capped because comparison suitability is weak for the selected search intent.
Comparison suitability score is below the Phase 1 recommended threshold.

Dataset Warnings

Microarray expression context was detected; compare separately from RNA-seq cohorts.
Microarray datasets are downgraded in the patient-tissue tumor-normal intent unless secondary assays are explicitly enabled.

Normalized Fields

276 fields

Field Value Source Derived by Confidence Evidence Reason

anatomical_source ileum GSM2537668 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum sample_title: 10I-CD-Active-Ileum-1 sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2537674 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum sample_title: 14I-CD-Active-Ileum-5 sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2537675 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum sample_title: 14N-CD-Normal-Ileum-5 sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM2537691 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence rectum sample_title: 26I-UC-Inactive-Rectum-17 sample-anatomical-source-v1 sample-local anatomical source

anatomical_source colon GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence rectum sample_title: 2I-UC-Normal-Rectum-19 sample-anatomical-source-v1 sample-local anatomical source

anatomical_source ileum GSM2537699 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence ileum sample_title: 4I-CD-Active-Ileum-21 sample-anatomical-source-v1 sample-local anatomical source

assay_type microarray GSE96665 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence microarray dataset_accession: GSE96665 dataset_title: Integrated analysis Of Biopsies From Inflammatory Bowel Disease Patients Identifies SAA1 As A Link Between Mucosal Microbes With TH17 ... keyword match keyword match: microarray

collection_method biopsy GSM2537668 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 10I-CD-Active-Ileum-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537669 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 10N-CD-Normal-Sigmoid-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537670 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 11I-CD-Active-Sigmoid-2 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537671 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 12I-UC-Normal-Sigmoid-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537672 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 12N-UC-Normal-Cecum-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537673 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 13N-UC-Normal-Transverse-4 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537674 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 14I-CD-Active-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537675 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 14N-CD-Normal-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537676 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 15N-UC-Inactive-Transverse-6 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537677 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 17N-CD-Normal-Descending-7 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537678 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 18N-CD-Inactive-Sigmoid-8 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537679 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 19N-UC-Normal-Transverse-9 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537680 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 1I-UC-Inactive-Sigmoid-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537681 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 1N-UC-Normal-Cecum-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537682 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 20N-UC-Inactive-Sigmoid-11 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537683 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 21I-UC-Active-Transverse-12 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Transverse controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537684 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 22Na-CD-Normal-Sigmoid-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537685 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 22Nb-CD-Normal-Ascending-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537686 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 23Na-CD-Normal-Ascending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537687 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 23Nb-CD-Normal-Descending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537688 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 24I-UC-Inactive-Ascending-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Ascending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537689 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 24N-UC-Active-Sigmoid-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537690 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 25N-CD-Normal-Sigmoid-16 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537691 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 26I-UC-Inactive-Rectum-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Rectum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537692 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 26N-UC-Inactive-Transverse-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537693 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 27I-UC-Active-Sigmoid-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537694 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 27N-UC-Inactive-Transverse-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 2I-UC-Normal-Rectum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Rectum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537696 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 2N-UC-Normal-Cecum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537697 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 3Ia-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537698 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 3Ib-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537699 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 4I-CD-Active-Ileum-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537700 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 4N-CD-Normal-Descending-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537701 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 5I-CD-Active-Descending-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Descending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537702 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 5N-CD-Inactive-Transverse-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537703 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 6N-CD-Normal-Transverse-23 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537704 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 7N-UC-Active-Sigmoid-24 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537705 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 8Ia-UC-Active-Sigmoid-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537706 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 8Ib-UC-Active-Ascending-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537707 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 9I-UC-Active-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary collection method match: biopsy

collection_method biopsy GSM2537708 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 9N-UC-Normal-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary collection method match: biopsy

disease inflammatory bowel disease GSE96665 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence inflammatory bowel disease dataset_accession: GSE96665 dataset_title: Integrated analysis Of Biopsies From Inflammatory Bowel Disease Patients Identifies SAA1 As A Link Between Mucosal Microbes With TH17 ... controlled vocabulary controlled vocabulary disease match: inflammatory bowel disease

disease Crohn's disease GSM2537668 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 10I-CD-Active-Ileum-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537668 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 10I-CD-Active-Ileum-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537669 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 10N-CD-Normal-Sigmoid-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537669 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 10N-CD-Normal-Sigmoid-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537670 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 11I-CD-Active-Sigmoid-2 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537670 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 11I-CD-Active-Sigmoid-2 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537671 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 12I-UC-Normal-Sigmoid-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537671 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 12I-UC-Normal-Sigmoid-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537672 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 12N-UC-Normal-Cecum-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537672 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 12N-UC-Normal-Cecum-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537673 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 13N-UC-Normal-Transverse-4 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537673 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 13N-UC-Normal-Transverse-4 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537674 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 14I-CD-Active-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537674 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 14I-CD-Active-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537675 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 14N-CD-Normal-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537675 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 14N-CD-Normal-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ileum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537676 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 15N-UC-Inactive-Transverse-6 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537676 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 15N-UC-Inactive-Transverse-6 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537677 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 17N-CD-Normal-Descending-7 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537677 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 17N-CD-Normal-Descending-7 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537678 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 18N-CD-Inactive-Sigmoid-8 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537678 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 18N-CD-Inactive-Sigmoid-8 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537679 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 19N-UC-Normal-Transverse-9 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537679 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 19N-UC-Normal-Transverse-9 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537680 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 1I-UC-Inactive-Sigmoid-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537680 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 1I-UC-Inactive-Sigmoid-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537681 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 1N-UC-Normal-Cecum-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537681 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 1N-UC-Normal-Cecum-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537682 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 20N-UC-Inactive-Sigmoid-11 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537682 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 20N-UC-Inactive-Sigmoid-11 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537683 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 21I-UC-Active-Transverse-12 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537683 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 21I-UC-Active-Transverse-12 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537684 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 22Na-CD-Normal-Sigmoid-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537684 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 22Na-CD-Normal-Sigmoid-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537685 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 22Nb-CD-Normal-Ascending-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537685 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 22Nb-CD-Normal-Ascending-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537686 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 23Na-CD-Normal-Ascending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537686 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 23Na-CD-Normal-Ascending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537687 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 23Nb-CD-Normal-Descending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537687 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 23Nb-CD-Normal-Descending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537688 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 24I-UC-Inactive-Ascending-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537688 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 24I-UC-Inactive-Ascending-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537689 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 24N-UC-Active-Sigmoid-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537689 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 24N-UC-Active-Sigmoid-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537690 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 25N-CD-Normal-Sigmoid-16 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537690 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 25N-CD-Normal-Sigmoid-16 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537691 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 26I-UC-Inactive-Rectum-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Rectum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537691 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 26I-UC-Inactive-Rectum-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Rectum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537692 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 26N-UC-Inactive-Transverse-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537692 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 26N-UC-Inactive-Transverse-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537693 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 27I-UC-Active-Sigmoid-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537693 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 27I-UC-Active-Sigmoid-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537694 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 27N-UC-Inactive-Transverse-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537694 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 27N-UC-Inactive-Transverse-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 2I-UC-Normal-Rectum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Rectum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 2I-UC-Normal-Rectum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Rectum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537696 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 2N-UC-Normal-Cecum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537696 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 2N-UC-Normal-Cecum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537697 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 3Ia-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537697 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 3Ia-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537698 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 3Ib-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537698 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 3Ib-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537699 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 4I-CD-Active-Ileum-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537699 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 4I-CD-Active-Ileum-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537700 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 4N-CD-Normal-Descending-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537700 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 4N-CD-Normal-Descending-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537701 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 5I-CD-Active-Descending-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Descending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537701 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 5I-CD-Active-Descending-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Descending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537702 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 5N-CD-Inactive-Transverse-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537702 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 5N-CD-Inactive-Transverse-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537703 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 6N-CD-Normal-Transverse-23 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537703 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 6N-CD-Normal-Transverse-23 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537704 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 7N-UC-Active-Sigmoid-24 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537704 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 7N-UC-Active-Sigmoid-24 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537705 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 8Ia-UC-Active-Sigmoid-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537705 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 8Ia-UC-Active-Sigmoid-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537706 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 8Ib-UC-Active-Ascending-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537706 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 8Ib-UC-Active-Ascending-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537707 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 9I-UC-Active-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537707 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 9I-UC-Active-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

disease Crohn's disease GSM2537708 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence Crohn's disease 9N-UC-Normal-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: Crohn's disease

disease ulcerative colitis GSM2537708 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence ulcerative colitis 9N-UC-Normal-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary disease match: ulcerative colitis

organism Homo sapiens GSE96665 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence homo sapiens dataset_accession: GSE96665 dataset_title: Integrated analysis Of Biopsies From Inflammatory Bowel Disease Patients Identifies SAA1 As A Link Between Mucosal Microbes With TH17 ... keyword match keyword match: homo sapiens

primary_tissue primary tissue GSM2537668 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 10I-CD-Active-Ileum-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537669 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 10N-CD-Normal-Sigmoid-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537670 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 11I-CD-Active-Sigmoid-2 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537671 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 12I-UC-Normal-Sigmoid-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537672 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 12N-UC-Normal-Cecum-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537673 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 13N-UC-Normal-Transverse-4 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537674 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 14I-CD-Active-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537675 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 14N-CD-Normal-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537676 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 15N-UC-Inactive-Transverse-6 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537677 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 17N-CD-Normal-Descending-7 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537678 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 18N-CD-Inactive-Sigmoid-8 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537679 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 19N-UC-Normal-Transverse-9 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537680 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 1I-UC-Inactive-Sigmoid-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537681 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 1N-UC-Normal-Cecum-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537682 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 20N-UC-Inactive-Sigmoid-11 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537683 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 21I-UC-Active-Transverse-12 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Transverse controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537684 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 22Na-CD-Normal-Sigmoid-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537685 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 22Nb-CD-Normal-Ascending-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537686 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 23Na-CD-Normal-Ascending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537687 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 23Nb-CD-Normal-Descending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537688 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 24I-UC-Inactive-Ascending-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Ascending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537689 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 24N-UC-Active-Sigmoid-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537690 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 25N-CD-Normal-Sigmoid-16 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537691 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 26I-UC-Inactive-Rectum-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Rectum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537692 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 26N-UC-Inactive-Transverse-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537693 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 27I-UC-Active-Sigmoid-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537694 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 27N-UC-Inactive-Transverse-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 2I-UC-Normal-Rectum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Rectum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537696 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 2N-UC-Normal-Cecum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537697 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 3Ia-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537698 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 3Ib-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537699 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 4I-CD-Active-Ileum-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537700 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 4N-CD-Normal-Descending-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537701 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 5I-CD-Active-Descending-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Descending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537702 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 5N-CD-Inactive-Transverse-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537703 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 6N-CD-Normal-Transverse-23 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537704 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 7N-UC-Active-Sigmoid-24 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537705 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 8Ia-UC-Active-Sigmoid-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537706 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 8Ib-UC-Active-Ascending-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537707 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 9I-UC-Active-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue GSM2537708 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence biopsy 9N-UC-Normal-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary primary tissue match: biopsy

sample_type inflamed tissue GSM2537668 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 10I-CD-Active-Ileum-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537669 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 10N-CD-Normal-Sigmoid-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537669 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 10N-CD-Normal-Sigmoid-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537670 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 11I-CD-Active-Sigmoid-2 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537671 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 12I-UC-Normal-Sigmoid-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537671 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 12I-UC-Normal-Sigmoid-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537672 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 12N-UC-Normal-Cecum-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537672 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 12N-UC-Normal-Cecum-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537673 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 13N-UC-Normal-Transverse-4 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537673 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 13N-UC-Normal-Transverse-4 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537674 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 14I-CD-Active-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537675 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 14N-CD-Normal-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ileum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537675 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 14N-CD-Normal-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ileum controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537676 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 15N-UC-Inactive-Transverse-6 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537677 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 17N-CD-Normal-Descending-7 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537677 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 17N-CD-Normal-Descending-7 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537678 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 18N-CD-Inactive-Sigmoid-8 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537679 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 19N-UC-Normal-Transverse-9 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537679 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 19N-UC-Normal-Transverse-9 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537680 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 1I-UC-Inactive-Sigmoid-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537681 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 1N-UC-Normal-Cecum-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537681 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 1N-UC-Normal-Cecum-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537682 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 20N-UC-Inactive-Sigmoid-11 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537683 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 21I-UC-Active-Transverse-12 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537684 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 22Na-CD-Normal-Sigmoid-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537684 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 22Na-CD-Normal-Sigmoid-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537685 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 22Nb-CD-Normal-Ascending-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537685 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 22Nb-CD-Normal-Ascending-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537686 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 23Na-CD-Normal-Ascending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537686 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 23Na-CD-Normal-Ascending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537687 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 23Nb-CD-Normal-Descending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537687 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 23Nb-CD-Normal-Descending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537688 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 24I-UC-Inactive-Ascending-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537689 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 24N-UC-Active-Sigmoid-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537690 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 25N-CD-Normal-Sigmoid-16 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537690 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 25N-CD-Normal-Sigmoid-16 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537691 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 26I-UC-Inactive-Rectum-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Rectum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537692 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 26N-UC-Inactive-Transverse-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537693 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 27I-UC-Active-Sigmoid-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537694 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 27N-UC-Inactive-Transverse-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 2I-UC-Normal-Rectum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Rectum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 2I-UC-Normal-Rectum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Rectum controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537696 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 2N-UC-Normal-Cecum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537696 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 2N-UC-Normal-Cecum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537697 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 3Ia-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537698 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 3Ib-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537699 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 4I-CD-Active-Ileum-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537700 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 4N-CD-Normal-Descending-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537700 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 4N-CD-Normal-Descending-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537701 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 5I-CD-Active-Descending-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Descending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537702 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 5N-CD-Inactive-Transverse-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537703 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 6N-CD-Normal-Transverse-23 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537703 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 6N-CD-Normal-Transverse-23 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary sample type match: normal

sample_type inflamed tissue GSM2537704 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 7N-UC-Active-Sigmoid-24 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537705 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 8Ia-UC-Active-Sigmoid-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537706 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 8Ib-UC-Active-Ascending-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537707 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 9I-UC-Active-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type inflamed tissue GSM2537708 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence inflammation 9N-UC-Normal-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: inflammation

sample_type normal tissue GSM2537708 Runtime Siftome inference UNRESOLVED / UNREVIEWED low confidence normal 9N-UC-Normal-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary sample type match: normal

tissue intestine GSE96665 Runtime Siftome inference UNRESOLVED / UNREVIEWED high confidence intestine dataset_accession: GSE96665 dataset_title: Integrated analysis Of Biopsies From Inflammatory Bowel Disease Patients Identifies SAA1 As A Link Between Mucosal Microbes With TH17 ... controlled vocabulary controlled vocabulary tissue match: intestine

tissue intestine GSM2537668 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 10I-CD-Active-Ileum-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537669 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 10N-CD-Normal-Sigmoid-1 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537670 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 11I-CD-Active-Sigmoid-2 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537671 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 12I-UC-Normal-Sigmoid-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537672 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 12N-UC-Normal-Cecum-3 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537673 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 13N-UC-Normal-Transverse-4 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537674 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 14I-CD-Active-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537675 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 14N-CD-Normal-Ileum-5 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ileum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537676 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 15N-UC-Inactive-Transverse-6 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537677 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 17N-CD-Normal-Descending-7 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537678 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 18N-CD-Inactive-Sigmoid-8 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537679 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 19N-UC-Normal-Transverse-9 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537680 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 1I-UC-Inactive-Sigmoid-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537681 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 1N-UC-Normal-Cecum-10 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537682 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 20N-UC-Inactive-Sigmoid-11 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537683 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 21I-UC-Active-Transverse-12 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Transverse controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537684 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 22Na-CD-Normal-Sigmoid-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537685 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 22Nb-CD-Normal-Ascending-13 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537686 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 23Na-CD-Normal-Ascending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537687 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 23Nb-CD-Normal-Descending-14 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537688 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 24I-UC-Inactive-Ascending-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Ascending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537689 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 24N-UC-Active-Sigmoid-15 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537690 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 25N-CD-Normal-Sigmoid-16 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue colon GSM2537691 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence rectum 26I-UC-Inactive-Rectum-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Rectum controlled vocabulary controlled vocabulary tissue match: rectum

tissue intestine GSM2537691 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 26I-UC-Inactive-Rectum-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Rectum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537692 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 26N-UC-Inactive-Transverse-17 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537693 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 27I-UC-Active-Sigmoid-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537694 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 27N-UC-Inactive-Transverse-18 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary tissue match: intestinal

tissue colon GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence rectum 2I-UC-Normal-Rectum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Rectum controlled vocabulary controlled vocabulary tissue match: rectum

tissue intestine GSM2537695 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 2I-UC-Normal-Rectum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Rectum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537696 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 2N-UC-Normal-Cecum-19 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Cecum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537697 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 3Ia-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537698 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 3Ib-CD-Active-Sigmoid-20 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537699 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 4I-CD-Active-Ileum-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Ileum controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537700 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 4N-CD-Normal-Descending-21 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Descending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537701 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 5I-CD-Active-Descending-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Active; intestinal region: Descending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537702 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 5N-CD-Inactive-Transverse-22 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Inactive; intestinal region: Transverse controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537703 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 6N-CD-Normal-Transverse-23 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): CD; inflammation: Normal; intestinal region: Transverse controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537704 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 7N-UC-Active-Sigmoid-24 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537705 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 8Ia-UC-Active-Sigmoid-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Sigmoid controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537706 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 8Ib-UC-Active-Ascending-25 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537707 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 9I-UC-Active-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Active; intestinal region: Ascending controlled vocabulary controlled vocabulary tissue match: intestinal

tissue intestine GSM2537708 Runtime Siftome inference UNRESOLVED / UNREVIEWED medium confidence intestinal 9N-UC-Normal-Ascending-26 Intestinal mucosa pinch biopsy disease (uc = ulcerative colitis; cd = crohn's disease): UC; inflammation: Normal; intestinal region: Ascending controlled vocabulary controlled vocabulary tissue match: intestinal

Sample Group Preview

41 rows shown Show Hide

Study totals: Case 23 | Control 18 | Unassigned 0 | Excluded 0 | Ambiguous 0 41 rows shown

Group	Role	Accession	Title	Source / characteristics	Reason
Inflamed tissue	Case	GSM2537668	10I-CD-Active-Ileum-1	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Active; Intestinal region: Ileum	Case marker detected.
Inflamed tissue	Case	GSM2537670	11I-CD-Active-Sigmoid-2	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Active; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537674	14I-CD-Active-Ileum-5	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Active; Intestinal region: Ileum	Case marker detected.
Inflamed tissue	Case	GSM2537676	15N-UC-Inactive-Transverse-6	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Inactive; Intestinal region: Transverse	Case marker detected.
Inflamed tissue	Case	GSM2537678	18N-CD-Inactive-Sigmoid-8	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Inactive; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537680	1I-UC-Inactive-Sigmoid-10	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Inactive; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537682	20N-UC-Inactive-Sigmoid-11	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Inactive; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537683	21I-UC-Active-Transverse-12	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Active; Intestinal region: Transverse	Case marker detected.
Inflamed tissue	Case	GSM2537688	24I-UC-Inactive-Ascending-15	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Inactive; Intestinal region: Ascending	Case marker detected.
Inflamed tissue	Case	GSM2537689	24N-UC-Active-Sigmoid-15	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Active; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537691	26I-UC-Inactive-Rectum-17	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Inactive; Intestinal region: Rectum	Case marker detected.
Inflamed tissue	Case	GSM2537692	26N-UC-Inactive-Transverse-17	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Inactive; Intestinal region: Transverse	Case marker detected.
Inflamed tissue	Case	GSM2537693	27I-UC-Active-Sigmoid-18	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Active; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537694	27N-UC-Inactive-Transverse-18	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Inactive; Intestinal region: Transverse	Case marker detected.
Inflamed tissue	Case	GSM2537697	3Ia-CD-Active-Sigmoid-20	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Active; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537698	3Ib-CD-Active-Sigmoid-20	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Active; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537699	4I-CD-Active-Ileum-21	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Active; Intestinal region: Ileum	Case marker detected.
Inflamed tissue	Case	GSM2537701	5I-CD-Active-Descending-22	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Active; Intestinal region: Descending	Case marker detected.
Inflamed tissue	Case	GSM2537702	5N-CD-Inactive-Transverse-22	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Inactive; Intestinal region: Transverse	Case marker detected.
Inflamed tissue	Case	GSM2537704	7N-UC-Active-Sigmoid-24	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Active; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537705	8Ia-UC-Active-Sigmoid-25	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Active; Intestinal region: Sigmoid	Case marker detected.
Inflamed tissue	Case	GSM2537706	8Ib-UC-Active-Ascending-25	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Active; Intestinal region: Ascending	Case marker detected.
Inflamed tissue	Case	GSM2537707	9I-UC-Active-Ascending-26	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Active; Intestinal region: Ascending	Case marker detected.
Normal tissue	Control	GSM2537669	10N-CD-Normal-Sigmoid-1	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Sigmoid	Control marker detected.
Normal tissue	Control	GSM2537671	12I-UC-Normal-Sigmoid-3	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Normal; Intestinal region: Sigmoid	Control marker detected.
Normal tissue	Control	GSM2537672	12N-UC-Normal-Cecum-3	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Normal; Intestinal region: Cecum	Control marker detected.
Normal tissue	Control	GSM2537673	13N-UC-Normal-Transverse-4	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Normal; Intestinal region: Transverse	Control marker detected.
Normal tissue	Control	GSM2537675	14N-CD-Normal-Ileum-5	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Ileum	Control marker detected.
Normal tissue	Control	GSM2537677	17N-CD-Normal-Descending-7	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Descending	Control marker detected.
Normal tissue	Control	GSM2537679	19N-UC-Normal-Transverse-9	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Normal; Intestinal region: Transverse	Control marker detected.
Normal tissue	Control	GSM2537681	1N-UC-Normal-Cecum-10	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Normal; Intestinal region: Cecum	Control marker detected.
Normal tissue	Control	GSM2537684	22Na-CD-Normal-Sigmoid-13	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Sigmoid	Control marker detected.
Normal tissue	Control	GSM2537685	22Nb-CD-Normal-Ascending-13	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Ascending	Control marker detected.
Normal tissue	Control	GSM2537686	23Na-CD-Normal-Ascending-14	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Ascending	Control marker detected.
Normal tissue	Control	GSM2537687	23Nb-CD-Normal-Descending-14	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Descending	Control marker detected.
Normal tissue	Control	GSM2537690	25N-CD-Normal-Sigmoid-16	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Sigmoid	Control marker detected.
Normal tissue	Control	GSM2537695	2I-UC-Normal-Rectum-19	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Normal; Intestinal region: Rectum	Control marker detected.
Normal tissue	Control	GSM2537696	2N-UC-Normal-Cecum-19	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Normal; Intestinal region: Cecum	Control marker detected.
Normal tissue	Control	GSM2537700	4N-CD-Normal-Descending-21	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Descending	Control marker detected.
Normal tissue	Control	GSM2537703	6N-CD-Normal-Transverse-23	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): CD; Inflammation: Normal; Intestinal region: Transverse	Control marker detected.
Normal tissue	Control	GSM2537708	9N-UC-Normal-Ascending-26	Intestinal mucosa pinch biopsy Disease (uc = ulcerative colitis; Cd = crohn's disease): UC; Inflammation: Normal; Intestinal region: Ascending	Control marker detected.

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Carry Siftome's disease, organism, specimen, assay, data type, and accession into a validation project. Uncertain fields remain Unknown.

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Use as Discovery Cohort