IBD Colon Tissue Expression Collection

3 datasets

Public colon tissue expression datasets for IBD, Crohn's disease, and ulcerative colitis.

Disease
Inflammatory bowel disease
Scope
Public colon tissue expression datasets for IBD, Crohn's disease, and ulcerative colitis.
Datasets
3 datasets
Samples
522 samples
Species coverage
Homo sapiens
Technology coverage
microarray, bulk RNA-seq
Main tissues
colon biopsy, inflamed colon tissue, non-inflamed colon tissue
Main comparison types
IBD vs non-IBD control, inflamed vs non-inflamed tissue, Crohn's disease vs ulcerative colitis
Curation status
MVP candidate curation
Last update
2026-06-22
Version number
v0.1-preview

Collection Workflows

3 datasets

Use this curated collection as a starting point for cohort comparison, Evidence Pack generation, or broader ranked dataset search.

Open in Cohort Builder Generate Evidence Pack Search matching datasets
Curated cohorts
3 curated cohorts
Evidence Pack seed
Inflammatory bowel disease in colon biopsy, inflamed colon tissue, non-inflamed colon tissue
Search scope
Public colon tissue expression datasets for IBD, Crohn's disease, and ulcerative colitis.

Collection Preview

Preview access

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Technology Distribution

microarray
3 datasets 522 samples

Limited Usage Notes

  • Disease/control expression analysis
  • Inflammation-state comparison
  • Disease vs control expression analysis for IBD colon tissue cohorts.
  • Cross-dataset consistency checks for ulcerative colitis and Crohn's disease signals.
Example dataset Tissue Technology Samples
GSE11223 Colon biopsy expression in ulcerative colitis and controls colon biopsy microarray 243 samples
GSE75214 IBD colon tissue inflammation-state expression cohort inflamed colon tissue microarray 194 samples
GSE16879 Crohn's disease and ulcerative colitis colon expression colon biopsy microarray 85 samples